HIST1H3J - morinlab/LLMPP GitHub Wiki
<<Warn("The variants reported in this gene failed QC")>>
See below or the study page for more information
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timeline
title Publication timing
2019-09-26 : Panea : BL
Entity | Tier | Description |
---|---|---|
![]() |
3 | Retired, Failed QC[@paneaWholeGenomeLandscape2019] |
Entity | source | frequency (%) |
---|---|---|
BL | GAMBL genomes+capture | 2.31 |
BL | Thomas cohort | 1.70 |
BL | Panea cohort | 5.00 |
Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
---|---|---|---|---|
BL | No | No | 6.396 | 0 |
DLBCL | No | No | 1.417 | 0 |
FL | No | No | 0.000 | 0 |
Chromosome | Coordinate (hg19) | ref>alt | HGVSp |
---|---|---|---|
chr6 | 27858236 | G>C | A112G |
chr6 | 27858222 | G>A | R117C |
chr6 | 27858210 | T>G | M121L |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
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