HIST1H3J - morinlab/LLMPP GitHub Wiki
<<Warn("The variants reported in this gene failed QC")>>
See below or the study page for more information
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timeline
title Publication timing
2019-09-26 : Panea : BL
| Entity | Tier | Description |
|---|---|---|
 |
3 | Retired, Failed QC[@paneaWholeGenomeLandscape2019] |
| Entity | source | frequency (%) |
|---|---|---|
| BL | GAMBL genomes+capture | 2.31 |
| BL | Thomas cohort | 1.70 |
| BL | Panea cohort | 5.00 |
| Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
|---|---|---|---|---|
| BL | No | No | 6.396 | 0 |
| DLBCL | No | No | 1.417 | 0 |
| FL | No | No | 0.000 | 0 |
| Chromosome | Coordinate (hg19) | ref>alt | HGVSp |
|---|---|---|---|
| chr6 | 27858236 | G>C | A112G |
| chr6 | 27858222 | G>A | R117C |
| chr6 | 27858210 | T>G | M121L |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
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