FOXP1 - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true nocite: | @reddyGeneticFunctionalDrivers2017,
Relevance tier by entity
include:tables/table1_FOXP1.md
Mutation incidence in large patient cohorts (GAMBL reanalysis)
| Entity | source | frequency (%) |
|---|---|---|
| DLBCL | GAMBL genomes | 0.57 |
| DLBCL | Schmitz cohort | 3.62 |
| DLBCL | Reddy cohort | 2.10 |
| DLBCL | Chapuy cohort | 2.99 |
Mutation pattern and selective pressure estimates
aSHM regions
| chr_name | hg19_start | hg19_end | region | regulatory_comment |
|---|---|---|---|---|
| chr3 | 71104986 | 71119518 | TSS-4 | active_promoter |
| chr3 | 71176427 | 71180960 | TSS-3 | active_promoter |
| chr3 | 71350633 | 71357665 | TSS-2 | active_promoter |
| chr3 | 71503103 | 71504870 | intron-1B | intron |
| chr3 | 71550753 | 71551478 | intron-1A | intron |
| chr3 | 71626341 | 71635648 | TSS-1 | active_promoter |
include:tables/browser_FOXP1.md
Expression
include:tables/mermaid_FOXP1.md