CHD4 - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib'
csl: 'NLM.csl'
link-citations: true
CHD4
History
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timeline
title Publication timing
2022-07-06 : Burkhardt : BL
Relevance tier by entity
Entity |
Tier |
Description |
![BL](https://github.com/morinlab/LLMPP/wiki/images/icons/BL_tier2.png) |
2 |
relevance in BL not firmly established[@burkhardtClinicalRelevanceMolecular2022b] |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
Entity |
source |
frequency (%) |
BL |
GAMBL genomes+capture |
3.93 |
BL |
Thomas cohort |
NA |
BL |
Panea cohort |
NA |
Mutation pattern and selective pressure estimates
Entity |
aSHM |
Significant selection |
dN/dS (missense) |
dN/dS (nonsense) |
BL |
No |
No |
1.781 |
0 |
DLBCL |
No |
No |
3.513 |
0 |
FL |
No |
No |
1.815 |
0 |
View coding variants in ProteinPaint hg19 or hg38
![](https://github.com/morinlab/LLMPP/wiki/images/proteinpaint/CHD4_NM_001273.svg)
View all variants in GenomePaint hg19 or hg38
![](https://github.com/morinlab/LLMPP/wiki/images/proteinpaint/CHD4.svg)
CHD4 Expression
![](https://github.com/morinlab/LLMPP/wiki/images/gene_expression/CHD4_by_pathology.svg)
References