CDH9 - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib'
csl: 'NLM.csl'
link-citations: true
CDH9
History
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timeline
title Publication timing
2013-08-15 : Morin : DLBCL
Relevance tier by entity
Entity |
Tier |
Description |
![DLBCL](https://github.com/morinlab/LLMPP/wiki/images/icons/DLBCL_tier2.png) |
2 |
relevance in DLBCL not firmly established[@morinMutationalStructuralAnalysis2013] |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
Entity |
source |
frequency (%) |
DLBCL |
GAMBL genomes |
3.63 |
DLBCL |
Schmitz cohort |
3.40 |
DLBCL |
Reddy cohort |
2.90 |
DLBCL |
Chapuy cohort |
2.56 |
Mutation pattern and selective pressure estimates
Entity |
aSHM |
Significant selection |
dN/dS (missense) |
dN/dS (nonsense) |
BL |
No |
No |
0.920 |
0 |
DLBCL |
No |
No |
2.641 |
0 |
FL |
No |
No |
0.774 |
0 |
View coding variants in ProteinPaint hg19 or hg38
![](https://github.com/morinlab/LLMPP/wiki/images/proteinpaint/CDH9_NM_016279.svg)
View all variants in GenomePaint hg19 or hg38
![](https://github.com/morinlab/LLMPP/wiki/images/proteinpaint/CDH9.svg)
CDH9 Expression
![](https://github.com/morinlab/LLMPP/wiki/images/gene_expression/CDH9_by_pathology.svg)
All Mutations[@morinMutationalStructuralAnalysis2013]
RG008
RG034
RG065
References