ATR - morinlab/LLMPP GitHub Wiki


bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true nocite: | @reddyGeneticFunctionalDrivers2017,

TOC

Overview

Mutations in this gene were first described in DLBCL in 2017 by Reddy et al.[@reddyGeneticFunctionalDrivers2017] Subsequent exome and genome-wide studies of DLBCL did not reproduce this observation.

Relevance tier by entity

include:tables/table1_ATR.md

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 2.68
DLBCL Schmitz cohort 4.89
DLBCL Reddy cohort 2.80
DLBCL Chapuy cohort 3.85

Mutation pattern and selective pressure estimates

include:tables/dnds_ATR.md

include:tables/browser_ATR.md

Expression

Representative Mutations

Rating ★ ★ ★ ★ ★

Rating ★ ★ ☆ ☆ ☆

All Mutations

Reddy_2121T Reddy_2150T Reddy_2163T Reddy_2192T Reddy_2195T Reddy_2206T Reddy_2236T Reddy_2475T Reddy_2476T Reddy_2585T Reddy_2594T Reddy_2758T Reddy_2768T Reddy_2775T Reddy_2779T Reddy_2805T Reddy_2828T Reddy_2838T Reddy_2898T Reddy_2933T Reddy_2947T Reddy_3384T Reddy_3385T Reddy_3405T Reddy_3489T Reddy_3502T Reddy_3520T Reddy_3548T Reddy_3549T Reddy_3557T Reddy_3561T Reddy_3562T Reddy_3594T Reddy_3622T Reddy_3653T Reddy_3662T Reddy_3779T Reddy_3810T Reddy_3812T Reddy_3820T Reddy_3822T Reddy_3843T Reddy_3856T Reddy_3879T Reddy_3992T Reddy_705T

include:tables/mermaid_ATR.md

References