Gene Ontology and KEGG Orthology Mappings for 10 Strains of Pseudomonas stutzeri. - mauriceling/mauriceling.github.io GitHub Wiki

Citation: Lim, JX, Ling, MHT. 2019. Gene Ontology and KEGG Orthology Mappings for 10 Strains of Pseudomonas stutzeri. EC Proteomics and Bioinformatics 3(1): 12-18.

Link to [PDF].

Here is a permanent link to this [PDF] and [data set] in my own archive.

Gene Ontology (GO) and KEGG Orthology (KO) are controlled vocabularies for annotating gene and protein functions, and map-ping functions onto pathways; which enables metagenomic analysis. Pseudomonasstutzeri is an environmental bacterium with po-tential for biotechnology applications in the environment, despite being an opportunistic pathogen. However, there has been no GO nor KO annotations for P. stutzeri. This study presents the first GO and KO mapping for 10 strains of P. stutzeri for further studies into P. stutzeri. Of the 42764 peptides in 10 strains of P. stutzeri, 30435 (71.17%) peptides were annotated with one or more GO terms and 25034 (58.54%) of peptides were annotated with KO terms. The annotation files and sequences can be downloaded at https://tinyurl.com/GO-KO-Pstutzeri.