Page Index - lczech/popoolation GitHub Wiki
26 page(s) in this GitHub Wiki:
- Home
- Requirements
- With which data can I use PoPoolation
- Download PoPoolation
- PoPoolation scripts
- General note
- Variance-sliding.pl
- Variance-at-position.pl
- Visualise-output.pl
- VarSliding2Wiggle.pl
- VarSliding2Flybase.pl
- mauve-parser.pl
- calculate-divergence.pl
- basic-pipeline/trim-fastq.pl
- basic-pipeline/mask-sam-indelregions.pl
- basic-pipeline/identify-genomic-indel-regions.pl
- basic-pipeline/filter-pileup-by-gtf.pl
- basic-pipeline/convert-fastq.pl
- basic-pipeline/subsample-pileup.pl
- Calculating Tajima's D
- Detailed description of Tajima's D
- After PoPoolation
- Release Notes
- Teaching PoPoolation
- Walkthrough
- Waltkthrough Divergence