Bioinformatics Tutorial Wiki

Welcome to the Bioinformatics Tutorial Wiki!
This wiki provides a step-by-step guide from environment setup through advanced bioinformatics analyses. Click any module below to get started.

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📘 Table of Contents

0. Prerequisites & Setup

• Molecular Biology Refresher
• Linux & Command-Line
• Git & Environment Management

1. Foundations

• DNA, RNA & Protein Basics
• Biostatistics Refresher
• Intro to Biopython & Bioconductor

2. Sequence Analysis

• Pairwise Alignment
• Multiple Sequence Alignment
• Profile HMMs & Motif Finding

3. Genomics & Variants

• Genome Assembly Concepts
• Read Mapping & SAM/BAM
• Variant Calling & VCF Processing

4. Transcriptomics

• RNA-Seq Pipeline
• Differential Expression
• Functional Enrichment

5. Proteomics & Structure

• Mass-Spec Data Processing
• Protein Structure Visualization
• Structure Prediction (AlphaFold)

6. Advanced Topics

• Single-Cell Omics
• Metagenomics
• Network & Systems Biology
• Machine Learning Applications

7. Reproducibility & Projects

• Workflow Management
• Containers & Deployment
• Capstone Project