sudo rights - genetics-of-dna-methylation-consortium/godmc_phase2 GitHub Wiki
To be able to run the pipeline you will need to install a range of R packages from CRAN, bioconductor and github. In addition you will need to have a few other packages installed on your server such as R4.1 or higher
, git
, gpg
, sshpass
, pinentr
. If you have a module load
system installed on your server you can check whether it has already been installed with module avail
. If it is in the list of available software then you can load the package by for example: module load tools/git/2.35.1
.
You can find more details here: System requirements.