| 3D |
Volumetric viewer including transparent structures/dose surfaces |
| CommandLine |
CERR command line command definitions |
| Compression |
Compression files based on the use of bzip2 |
| Contouring |
Structure contouring-related m-files |
| CrossListing |
CERR code crosslisting and getDirFunInfo.m, which creates the crosslisting |
| Extras |
Miscellaneous directories, including some script examples |
| ImageRegistration |
Tools for registering images. |
| Importing |
Importing tools for RTOG archives |
| Labbook |
Tool to capture annotate and build CERR images into html files. |
| Log |
Log of m-files in CERR releases. |
| MeshBasedInterp |
c-libraries and m-code for creating trinagular surface representation of structure and dose contours. |
| Mex |
mex code |
| PlanAnalysis |
Dose volume histograms, dose surface histograms, and other analysis tools |
| PlanMetrics |
Various metrics and a template to create new metrics. |
| RTOG Specification |
An ASCII text file describing the RTOG specification used for CERR. |
| ScanConversion |
m-files which convert polygonal contours into 0-1 masks and then into the stored scan format |
| Uniformization |
m-files related to creation of CT scan set with uniform z-spacing, and registered voxel masks of structures |
| UserDefinedFunctions |
A directory for users to put commands |
| Utilities |
Various utility routines, including several text parsing tools. |
| Viewers |
GUI-related m-files |