Page Index - bahanonu/ciatah GitHub Wiki

26 page(s) in this GitHub Wiki:

• Home
• Please use the online documentation website going forward: https://bahanonu.github.io/ciatah/
• *Common issues and fixes
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• *Example pipeline
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• *Imaging analysis methods and code
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• Behavior: Animal tracking
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• Cross session cell alignment
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• Inscopix
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• Manual cell sorting of cell extraction outputs
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• Preprocessing: Improving SNR
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• Preprocessing: Motion Correction
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• Preprocessing: Spatial filtering
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• Preprocessing: Stripe removal from movies
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• Preprocessing: Temporal downsampling
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