Page Index - bahanonu/ciatah GitHub Wiki

14 page(s) in this GitHub Wiki:

• Home
• Please use the online documentation website going forward: https://bahanonu.github.io/ciatah/
• *Common issues and fixes
• *Example pipeline
• *Imaging analysis methods and code
• Behavior: Animal tracking
• Cross session cell alignment
• Inscopix
• Manual cell sorting of cell extraction outputs
• Preprocessing: Improving SNR
• Preprocessing: Motion Correction
• Preprocessing: Spatial filtering
• Preprocessing: Stripe removal from movies
• Preprocessing: Temporal downsampling