canu_command - aechchiki/SIB_LongReadsWorkshop_Zurich17 GitHub Wiki

canu -p dmel_ch4 \
     -d asm_test3 \
     genomeSize=2m \
     -maxThreads=2 useGrid=false \
     -pacbio-raw \ ~/pacbio/dna/dmel_ch4_reads.fastq.gz

Next

Go back to tutorial assembly using Canu

Go back to Table of content .