1.1 Cite AMDock - Valdes-Tresanco-MS/AMDock-win GitHub Wiki

When using AMDock program, please reference:

Valdes-Tresanco, M.S., Valdes-Tresanco, M.E., Valiente, P.A. and Moreno E. AMDock: a versatile graphical tool for assisting molecular docking with Autodock Vina and Autodock4. Biol Direct 15, 12 (2020). https://doi.org/10.1186/s13062-020-00267-2

and the original publication of the corresponding module (check here for the proper references).

Thanks!