disintegration protocol - MetabolicEngineeringGroupCBMA/MetabolicEngineeringGroupCBMA.github.io GitHub Wiki
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Prepare 50mL of fresh YPD in an Erlenmeyer flask (volume?).
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Start an overnight culture and let the cells grow for about 15h (for strain CEN.PK113-5D) in order for the cells to reach the stationary phase.
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Harvest the cells in a 50 mL falcon tube and centrifuge at 3000g for 5 min. at 4ºC.
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Wash the cells in ice-cold 0.9% NaCl (twice).
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Ressuspend the cells in 1 mL of NaCl 0.9% and transfer the suspension to a 2mL Eppendorf tube.
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Centrifuge the cells at 3000g for 5min and discard supernatant.
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Add 1mL (total volume) of desintegration buffer.
DISINTEGRATION BUFFER:
Compound | Concentration | Stock Solution | for 50mL |
---|---|---|---|
TEA (triethanolamine) pH 7.0 | 100 mM | 1 M | 25 mL |
EDTA pH 7.0 | 0.5 mM | 50 mM | 500 uL |
DTT | 0.5 mM | 50 mM | 500 uL |
PMSF (in DMSO) | 1.0 mM | 100 mM | 500 uL |
How to make TEA buffer ???
- Add glass beads, to the mixture, equal to the amount of cells (usually 100uL - 200uL), use a pcr tube (200uL)
- Intercalate between ice freeze and vortex ~1min (in each) for about 10min.
- Centrifuge the cells at 5000g for 5min. at 4ºC
- Harvest the supernatant into a fresh 1.5mL Eppendorf and store it at -20ºC till further use.