Page Index - JuliaPhylo/PhyloNetworks.jl GitHub Wiki

21 page(s) in this GitHub Wiki:

• Home
• topics covered
• Set-up
• locally
• for MBL workshop
• more details
• Bootstrap analysis
• Choice of number of hybridizations
• Continuous trait evolution
• Example Data
• Gene Trees MrBayes
• Gene Trees RAxML
• Introduction
• PhyloNetworks estimate & plot phylogenetic networks
• Quartet CF BUCKy
• SNaQ
• Species tree from quartet CFs QMC
• The Data
• TICR from alignments to quartet concordance factors
• TICR test tree versus network
• Workshop Requirements