Page Index - FNNDSC/ChRIS_ultron_backEnd GitHub Wiki

80 page(s) in this GitHub Wiki:

• Home
• Welcome to the ChRIS_ultron_backEnd wiki!
• 0. ChRIS preliminary workflow: intro
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• 1.1 ChRIS FS plugin workflow: upload files to CUBE and create a new top level feed (pl dircopy)
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• 1.2 ChRIS FS plugin workflow: upload files to CUBE and create a new top level feed (pl pacscopy)
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• 2.1 ChRIS DS plugin workflow: anonymize DICOM images.
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• 2.2 ChRIS DS plugin workflow: convert DICOM to jpg and invert image intensities.
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• 2.3 ChRIS DS plugin workflow: extract DICOM metadata.
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• 2.4 ChRIS FS DS DS plugin worflow: simulate a FreeSurfer MPC heatmap workflow
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• 2.4.1 ChRIS FS DS DS plugin worflow summary
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• 2.4.2 ChRIS FS DS DS plugin worflow summary [moc]
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• 3. ChRIS plugin PACS query workflow
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• 4. ChRIS plugin PACS retrieve workflow
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• 5. ChRIS plugin geretrieve
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• 6. ChRIS workflow: run prostate imaging segmenter
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• [HOW TO] Create a new ChRIS user account through the ChRIS API
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• [HOW TO] Register a compute resource via the REST API
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• [HOW TO] Register a plugin via Django dashboard
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• [HOW TO] Register a plugin via the REST API
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• [HOW TO] Use file download tokens through the ChRIS API
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• Admin workflow
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• ChRIS backend database design
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• ChRIS backend production services secret configuration files
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• ChRIS REST API design
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• ChRIS REST API Reference
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• Chris workflow
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• CUBE Development directly on the metal
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• Debugging
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• Debugging CUBE Containerized Services
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• Debugging CUBE pacsquery and pacsretrieve without containers
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• Debugging CUBE Services without Containers
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• Deployment
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• FastSurfer Workflow
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• Fedora 32 Support for Docker
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• MICCAI Work Flow (WIP)
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• PACS Pull Details
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• PACS Pull wokflow
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• Prune orphaned plugin instance files
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• Storage Backends
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• Vagrant Setup OSX
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• Workflow notes
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