Page Index - ConesaLab/SQANTI3 GitHub Wiki

33 page(s) in this GitHub Wiki:

• Home
• Dependencies and installation
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• Introduction to SQANTI3
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• IsoAnnotLite
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• Running SQANTI BUGSI
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• Running SQANTI with the wrapper
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• Running SQANTI3 filter
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• Running SQANTI3 from the wrapper
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• Running SQANTI3 Quality Control
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• Running SQANTI3 rescue
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• Running SQANTI‐reads
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• SQANTI3 isoform classification: categories and subcategories
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• SQANTI3 memory requeriments and paralellization
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• Sqanti3 wrapper script
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• Tutorial: running SQANTI3 on an example dataset
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• Understanding the output of SQANTI3 QC
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• Version history
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