Home - yoonso0-0/thinkpad-setup GitHub Wiki

Last update : Feb 2022

Ubuntu 20.04

Some essentials

sudo apt update -y && \
sudo apt install -y wget curl git autoconf ssh \
                    gdb lcov ccache \
                    gcc g++ gfortran \
                    clang clang-format clang-tidy \
                    gnome-tweaks gnome-tweak-tool gnome-shell-extensions \
                    chrony libssl-dev build-essential && \
sudo add-apt-repository universe && sudo apt update -y

CMake

wget https://cmake.org/files/v3.18/cmake-3.18.2.tar.gz && \
tar -xf  cmake-3.18.2.tar.gz && \
cd cmake-3.18.2 && \
./bootstrap && \
make -j8

sudo make install

Python (using pip)

sudo apt install -y python3-pip python3-numpy python3-matplotlib \
                 python3-ipython python3-scipy python3-h5py \
                 jupyter

Tex

Basic:

sudo apt install -y texlive texlive-base \
                    texlive-latex-base texlive-latex-extra texlive-latex-recommended \
                    texlive-fonts-recommended texlive-font-utils texlive-fonts-extra \
                    texlive-science latexmk

but this does not work well when updating packages..

See https://tex.stackexchange.com/questions/540429/tlmgr-in-ubuntu-20-04-local-tex-live-2019-is-older-than-remote-repository-2

First remove all existing texlive

sudo apt-get remove texlive* && \
rm -rf /usr/local/texlive/2020  && \
rm -rf ~/.texlive2020           && \
rm -rf /usr/local/texlive/2019  && \
rm -rf ~/.texlive2019

(texlive directory maybe in /usr/share as well..) Then, create a place for a new TexLive distribution to live, and give your user ownership of this directory

sudo mkdir -p /usr/local/texlive/2020 && \
sudo chown "$USER" /usr/local/texlive

Download and manually install TexLive

mkdir /tmp/texlive && cd /tmp/texlive && \
wget http://mirror.ctan.org/systems/texlive/tlnet/install-tl.zip && \
unzip ./install-tl.zip -d install-tl && \
cd install-tl/install-tl-$(date +%Y%m%d) && \
sudo perl ./install-tl

Post-Installation: you need to add to the path environment

export MANPATH="$MANPATH:/usr/local/texlive/202<N>/texmf-dist/doc/man" && \
export INFOPATH="$INFOPATH:/usr/local/texlive/202<N>/texmf-dist/doc/info" && \
export PATH=/usr/local/texlive/202<N>/bin/x86_64-linux:$PATH

and update with:

sudo $(which tlmgr) update --self
sudo $(which tlmgr) update --all

Language & Keyboard input

  • Click 'Mange Installed Languages' - 'Install/Remove Languages' - find Korean and click apply (need to restart)
  • Settings - Region & Language - add Korean(Hangul) input source.
  • Choose Korean as an input source on the top right panel.

Gnome tweaks

  • Keyboard & Mouse

    • Keyboard - Additional Layout Options - Ctrl position - Caps Lock as Ctrl
    • Keyboard - Additional Layout Options - Korean Hangul/Hanja keys - Make right Alt a Hangul Key

  • Startup Applications

    • Chrome
    • Dropbox
    • Slack

  • Top Bar

    • Battery Percentage : On

Fonts

sudo apt install -y fonts-powerline fonts-firacode fonts-inconsolata \
                    fonts-oxygen fonts-noto-mono fonts-nanum \
                    fonts-roboto fonts-cascadia-code fonts-cmu \
                    ttf-dejavu ttf-ubuntu-font-family

Git

git config --global user.email "[email protected]" && \
git config --global user.name "Yoonsoo Kim"

Configuring shell

Install zsh :

sudo apt install -y zsh

and also oh-my-zsh :

sh -c "$(wget https://raw.githubusercontent.com/robbyrussell/oh-my-zsh/master/tools/install.sh -O -)"

Powerlevel10k

Zsh plugins

  • auto suggestions
git clone https://github.com/zsh-users/zsh-autosuggestions ${ZSH_CUSTOM:-~/.oh-my-zsh/custom}/plugins/zsh-autosuggestions

and add the plugin zsh-autosuggestions inside .zshrc

  • completions
git clone https://github.com/zsh-users/zsh-completions ${ZSH_CUSTOM:=~/.oh-my-zsh/custom}/plugins/zsh-completions

and also add the plugin zsh-completions.

  • fast syntax highlighting
git clone https://github.com/zdharma/fast-syntax-highlighting.git \
  ${ZSH_CUSTOM:-$HOME/.oh-my-zsh/custom}/plugins/fast-syntax-highlighting

with fast-syntax-highlighting

Terminal

Preferences - Shortcuts

  • New Tab : Ctrl+T
  • Close Tab : Ctrl+W
  • Tabs : Switch to Tab N : Ctrl+N

Mapping rm to trash

sudo apt install trash-cli

add alias rm="trash" alias to .zshrc

SSH keys

cd ~/.ssh
ssh-keygen -t rsa -C "<email-address>"

sshfs

sshfs [email protected]:/home/ykim -o transform_symlinks -o follow_symlinks ~/sshfs/wheeler

Colorschemes

Softwares

  • Google chrome
sudo dpkg -i google-chrome-stable_current_amd64.deb
  • htop
sudo apt install htop
  • Dropbox Requires following dependencies:
sudo apt install python3-gpg glibc-source libgtk-3-dev libglib2.0-dev libappindicator-dev

  • Slack : get .deb

  • VScode : Settings : "keyboard.dispatch": "keyCode"

Vim

Install NeoVim with sudo apt install -y neovim, then add

alias vi='nvim'
alias vim='nvim'

to .zshrc.

SpECTRE

Using docker or singularity

Native build (with clang)

Required:

sudo apt install -y gfortran libgsl-dev libjemalloc-dev \
                    libopenblas-dev liblapack-dev \
                    libhdf5-dev hdf5-tools \
                    libboost-dev libboost-program-options-dev

Additionals:

sudo apt install -y doxygen black pybind11-dev
pip3 install beautifulsoup4 pybtex coverxygen yapf

Catch 2

https://github.com/catchorg/Catch2/blob/devel/docs/cmake-integration.md#installing-catch2-from-git-repository

cmake -Bbuild -H. -DBUILD_TESTING=OFF -DBUILD_SHARED_LIBS=ON

Charm++

git clone https://github.com/UIUC-PPL/charm && \
cd charm && \
git checkout v7.0.0 && \
git apply ~<SPECTRE_ROOT>/support/Charm/v7.0.0.patch
./build charm++ multicore-linux-x86_64 clang --with-production --build-shared --destination=multicore-linux-x86_64-clang-shared -j10

Google benchmark

https://github.com/google/benchmark#installation