ADDGENE - winkusch/Easy2 GitHub Wiki

Add nearest gene and nearest gene distance.

FUNCTION	PARAMETER	DEFAULT	DESCRIPTION
ADDGENE	--rcdCriterion		R expression with criterion to annotate genes (only variants that fulfill the criterion are being annotated by nearest gene)
ADDGENE	--colInChr		Column name of the input chromosome.
ADDGENE	--colInPos		Column name of the input position.
ADDGENE	--fileAnnotGene		file with gene positions (required columns: Chr, Pos1, Pos2, Gene)
ADDGENE	--colInMarker		Column name of the input marker column.
ADDGENE	--strTag		Tag for the function step that will be added to related variables in the REPORT and to related output to ensure unique and easily recognizable file names and REPORT variable names.