Getting started - vanTeeffelenLab/ExTrack GitHub Wiki

In order to test ExTrack and gain insights on how it works, we advise the users to follow one of the 2 jupyter notebook tutorials which can be found in the Tutorial folder:

https://github.com/vanTeeffelenLab/ExTrack/blob/main/Tutorials/Tutorial_ExTrack.ipynb

Tutorial_ExTrack.ipynb gives an overview of all the possibilities of the different modules of ExTrack.

https://github.com/vanTeeffelenLab/ExTrack/blob/main/Tutorials/Fitting_methods.ipynb

Fitting_methods.ipynb enumerates the fitting possibilities by specifying parameters, For instance one can fit a unique localization error or one localization error per spatial dimension. Localization error for eack peak can also be computed prior to ExTrack based of the peaks intensity and shape, In this case there is no need for localization error parameter.