Bioinformatic Workflows - urol-e5/deep-dive GitHub Wiki

Below are links to detailed bioinformatic workflows that guide the processing of raw sequencing data, leading to the generation of count matrices. The workflows incorporate diverse modules, software, and scripts, offering specific details on each processing step, including tasks such as trimming and mapping.

Feature Lists and FastAs which will include list of discovered products (eg sRNA, lncRNA, and corresponding FastAs) are found here

A. pulchra

sub-effort D

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P. evermanni

sub-effort E

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P. meandrina

sub-effort F