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Welcome to the deep-dive wiki!

Navigate to our Expression Data Types page to find detailed information on expression data derived from RNA (i.e., raw and trimmed sequence data files and count matrices) for each of our species (Acropora pulchra, Porites evermanni, and Pocillopora meandrina).

Navigate to our Species Characteristics and Genomic Resources where you can find descriptions of our key species (corresponding to sub-efforts) and links to canonical genomic resources to use for analysis.

Navigate to our Bioinformatic Workflows page to find detailed bioinformatic workflows that guide the processing of raw sequencing data, leading to the generation of count matrices. The workflows incorporate diverse modules, software, and scripts, offering specific details on each processing step, including tasks such as trimming and mapping.