How to add an update site in Fiji - stoeter/Fiji-Tools-for-HCS GitHub Wiki

How to add update site in Fiji manually?

Following this description you will enable Fiji to use the 'Tools-for-HCS' as plugins.

go to the menue 'Help' and the Update Fiji command

click the button 'Manage update site' to add the 'Tools-for-HCS' update site

click 'Add' and enter any name for the 'Tools-for-HCS' update site
enter URL:
```
http://sites.imagej.net/TDS/
```
click somewhere and then 'Close'

you should see now 'Tools-for-HCS'/'TDS' scripts or macros to be updated
click 'Apply Changes'
to apply the updates go to 'Help'->'Refresh Menues'... or restart Fiji

the new installed 'Tools-for-HCS'/'TDS' macros/plugins can be accessed via 'Plugins'->'TDS macros'

How to upload macros/plugins for Fiji to 'Tools-for-HCS'/'TDS' (MPI-CBG) update site

this is for Fiji developers (macros or plugins)
first update you Fiji to the latest versions!

copy the script/macro (.ijm) that you developed here:

../Fiji.app/plugins/Scripts/Plugins/Fiji-Tools-for-HCS/

make scripts available in the menue go to 'Help'->'Refresh Menues'... or restart Fiji (see above)

install the TDS update site as described above
go to the menue 'Help' and the Update Fiji command and click 'Advanced Mode'(see above)
Select from 'View Options:' 'View local-only files'

Select your scripts and change 'Local-only' to 'Upload to Tools-for-HSC'
click 'Apply Changes (Upload)' and enter password (use password or ask stoeter at mpi-cbg.de)

now macro was loaded onto Fiji plugin server, 'Upload Successfully'

check that kind of scripts are available on the Fiji server here:

http://sites.imagej.net/TDS/plugins/Scripts/Plugins/Fiji-Tools-for-HCS/

scripts should be now available for download using Fiji updater!

to remove your scripts from Fiji server and change to 'Make obsolete/Remove it'
click 'Upload to server' and enter password to remove script
now macro was removed to Fiji plugin server, 'Upload Successfully'

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