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General description

The Protein Data Bank (PDB) was the inaugural open-access digital database in the fields of biology and medicine. As a premier worldwide repository, PDB offers access to three-dimensional structural data of large biomolecules – including proteins, DNA, and RNA – that are present in all living organisms. This data is crucial for both educational and research purposes, positioning PDB as a key resource in scientific exploration and discovery.

PDB aims to expand the frontiers of fundamental biology, biotechnology, energy, and health through open and sustainable access to the 3D structure, function, and evolution of biological macromolecules contained in the Protein Data Bank (PDB) archive.

Related publications

• Integrative illustration of a JCVI-syn3A minimal cell
• Exploring protein symmetry at the RCSB Protein Data Bank
• Molecular explorations of cancer biology and therapeutics at PDB-101
• Integrative visualization of the molecular structure of a cellular microdomain
• Simplified quality assessment for small-molecule ligands in the Protein Data Bank
• ModelCIF: An Extension of PDBx/mmCIF Data Representation for Computed Structure Models
• PDB-101: Educational resources supporting molecular explorations through biology and medicine
• RCSB Protein Data Bank 1D3D module: Displaying positional features on macromolecular assemblies
• Announcing the launch of Protein Data Bank China as an Associate Member of the Worldwide Protein Data Bank Partnership
• RCSB Protein Data Bank resources for structure-facilitated design of mRNA vaccines for existing and emerging viral pathogens
• RCSB Protein Data Bank: visualizing groups of experimentally determined PDB structures alongside computed structure models of proteins
• RCSB Protein Data Bank: Celebrating 50 years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D
• RCSB Protein Data Bank: Efficient Searching and Simultaneous Access to One Million Computed Structure Models Alongside the PDB Structures Enabled by Architectural Advances
• An idea to explore: How an interdisciplinary undergraduate course exploring a global health challenge in molecular detail enabled science communication and collaboration in diverse audiences
• A comprehensive survey of coronaviral main protease active site diversity in 3D: Identifying and analyzing drug discovery targets in search of broad specificity inhibitors for the next coronavirus pandemic

Data access

More information about PDB can be found at https://www.rcsb.org/

To access PDB data, visit https://www.rcsb.org/#Category-download