CFDE - sporedata/researchdesigneR GitHub Wiki

General description

The Common Fund (CF) Data Ecosystem (CFDE) is designed to enable researchers to access and interact with various data sets from multiple Common Fund (CF) programs within a cloud-based digital environment. CF programs produce an extensive array of diverse and important data sets, intended for use by the research community to fast-track discoveries.

The CFDE portal aims to establish a collective resource that ensures CF data sets adhere to the FAIR principles (Findable, Accessible, Interoperable, and Reusable). This will facilitate researchers in exploring scientific and clinical inquiries from a unified access point.

Related publications

• Gene and drug landing page aggregator
• Getting Started with LINCS Datasets and Tools
• Getting Started with the IDG KMC Datasets and Tools
• HMPDACC: a Human Microbiome Project Multi-omic data resource
• Making Common Fund data more findable: Catalyzing a Data Ecosystem
• FAIRshake: Toolkit to Evaluate the FAIRness of Research Digital Resources
• Evaluating FAIR maturity through a scalable, automated, community-governed framework
• SigCom LINCS: data and metadata search engine for a million gene expression signatures
• De novo mutations across 1,465 diverse genomes reveal mutational insights and reductions in the Amish founder population

Data access

More information about CFDE can be found at https://www.nih-cfde.org/

To access CFDE data, visit https://app.nih-cfde.org/