03.Computer Vision02.Image segmentation - sporedata/researchdesigneR GitHub Wiki

1. Use cases: in which situations should I use this method?

In situations where a specific structure needs to be isolated - see Rapid vessel segmentation and reconstruction of head and neck angiograms using 3D convolutional neural network

2. Input: what kind of data does the method require?

3. Algorithm: how does the method work?

Model mechanics

Reporting guidelines

A survey of image segmentation techniques

Data science packages

Suggested companion methods

Learning materials

Books *
Articles
- On deep learning for medical image analysis [1].

4. Output: how do I interpret this method's results?

Mock conclusions or most frequent format for conclusions reached at the end of a typical analysis.

Tables, plots, and their interpretation

5. SporeData-specific

Templates

Image recognition

Data science functions

References

[1] Carin L, Pencina MJ. On deep learning for medical image analysis . Jama. 2018 Sep 18;320(11):1192-3.

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