Examples

Slab 27

This slab seems to have the most singularities

An example outside of neuropil

• In Gary's predictions ( 35261.0, 1747.0, 5933.0 )
• Equivalent point in raw data Saalfeld convention ( 35261.0, 112.0, 5933.0 )
• It's approximate location in the dvid export

Specific points

First note the points below are permuted YZ relative to the above. Second, the two source points below are displaced by 1 pixel in x, but are mapped to the same point.

• [35261.0, 5933.0, 112.0] -> [37764.3558499446, 9085.78999952591, 112.0]
• [35262.0, 5933.0, 112.0] -> [37764.3558499446, 9085.78999952591, 112.0]

This code produces the output:

p1 [35261.0, 5933.0, 112.0]   ->  [37764.3558499446, 9085.78999952591, 112.0]
p2 [35262.0, 5933.0, 112.0]   ->  [37764.3558499446, 9085.78999952591, 112.0]
 
 source points are separated by: [1.0, 0.0, 0.0]
 target points are separated by: [0.0, 0.0, 0.0]

when passed the arguments for slab27:

--n5Path '/nrs/flyem/data/tmp/Z0115-22.n5'
-j '/align-13'
-i '/slab-27/raw'
-c slab-27.top.face
-f slab-27.bot.face
-t 0
-b 2714