Plotting diagnostics - s-ilic/ECLAIR GitHub Wiki

Details to be written; in the meantime, the --help argument of the plotting script lists the possible options associated with the --plots argument, cf. below.

  -p LIST, --plot LIST  list of plots to produce; argument should be a list of
                        comma-separated parameter indexes.
                        List of possible plots:
                        1 : -log(likelihood) values for all walkers along chain
                        2 : parameters values for all walkers along chain
                        3 : derived parameters for all walkers along chain
                        4 : mean acceptance rate for each walker as chain progresses
                        5 : acceptance rate averaged over walkers at each chain step
                        > Example: "1,2,4-6"  (hyphens indicate a range)
                        > Default: 1 (likelihood plot only)