Index - rbeckman-nextgen/test-mc GitHub Wiki
Created by Jacob Brauer, last modified on Mar 26, 2009
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Page: A way to think about Mirth
The hardest part of Mirth is getting your head around what is REALLY going on. I'm not sure I have it down completely, but here's where I am so far...hopefully this will help you. Mirth is like an airport with one entrance, and one or more gates. Everythi
Page: Accessing msg object from Database Writer
(Thanks to the nice folks from WebReach who told me about this one) The "msg" object (containing the HL7 message map) is not normally accessible from the Database Writer. This makes looping through multiple segments difficult if not impossible. The soluti
Page: Configuration (Official)
The goal of the Mirth Project is to develop Mirth Connect, an open source cross-platform HL7 interface engine that enables bi-directional sending of HL7 messages between systems and applications over multiple transports. By utilizing an enterprise service
Page: Configuring a new server datasource
This guide is applicable to Mirth Connect 1.x. Mirth Connect 2.x contains some of the files mentioned in mirth-dbconf.jar, and Mirth Connect 3.x requires additional changes to add a new server datasource. There are several steps that need to be taken to
Page: Connecting to the Mirth Connect embedded database
By default Mirth comes bundled with Apache Derby as its database for storing channel and message data. While this is useful for getting started quickly and evaluating Mirth, we strongly recommend switching to PostgreSQL or another external database in a p
Page: Contributor Agreement
The Mirth Project is a community-driven, open source effort. The Mirth Project welcomes and appreciates your contributions. Contributions can take the form of code, documentation, testing, feedback, feature requests, bug fixes, specifications, and money.
Page: Controlling and Monitoring a Channel with the Statistics and Status Controllers
Mirth provides several controllers to monitor and control channels. The Status controller allows you to check whether a channel is currently running, paused, etc, and allows you to change the state of the channel. The Statistics controller allows you to c
Page: Creating a custom REST Service in Mirth 3.0.x
Some clients will want a REST interface, and you'll want to host it within Mirth Connect. It's quite straightforward to build a rest-based service in Mirth Connect, but you have to know how to put the various pieces together. Step-by-step guide Create a c
Page: Creating a custom Web Service in Mirth Connect 3.0.1
Create a new Java project and create a class that extends com.mirth.connect.connectors.ws.AcceptMessage package com.custom.webservice; import javax.jws.WebMethod; import javax.jws.WebParam; import javax.jws.WebService; import com.mirth.connect.connectors.
Page: Database channel between specific hours
var vSQL = " select rownum as nomfit, "; vSQL = vSQL + " visi_centre_codi_centre as centre, "; vSQL = vSQL + "..."; var result="" var Hora=DateUtil.getCurrentDate('HH'); if (Hora>="10" && Hora <="12") { var dbConn = DatabaseConnectionFactory.createDatabas
Page: Debug Logging
The FHIR Listener logs out information for every request that comes in. In order to view these logs you can add the following to your log4j.properties file: # FHIR Listener debugging log4j.logger.com.mirth.connect.connectors.fhir.server = DEBUG log4j.logg
Page: Developing a FHIR Listener Channel
After deploying a FHIR Listener channel, the "/metadata" endpoint will already be configured to return an auto-generated capability statement. The FHIR server is now technically up and ready to receive requests. The next step is to use the source map info
Page: Developing Mirth Connect in Eclipse
Introduction Mirth Connect consists of six related projects: server, donkey, client (Administrator), manager (Server Manager), command (CLI), and webadmin (Web Dashboard). This article describes how to checkout the source for these projects into Eclipse.
Page: Development (Official)
Page: Dispatch multiple messages from javascript reader source
Occasionally it is useful to dispatch multiple messages from a javascript reader source connector. Typically this occurs when you are manually building a message or are reading multiple rows from a database and wish to dispatch multiple messages to the
Page: Encryption Configuration
These properties have been added as of Mirth Connect 2.2. There are several "hidden" properties that you can set to configure extra encryption features in Mirth Connect. Basic Settings To configure the general encryption settings that will be used for thi
Page: Example Channel
Before continuing, read the FHIR Connector overview and user guide if you haven't already: Overview User Guide This guide is separated into the following sections: Importing the Example Channel Creating the Database Adding the Configuration Map Properties
Page: Example Channel (TP1)
Note: This preview is now obsolete and superseded by Technology Preview 2. Before continuing, read the FHIR Technology Preview 1 overview and user guide if you haven't already: Overview User Guide (TP1) Importing the Example Channel Download the cha
Page: Example Channel (TP2)
Note: This preview is now obsolete and superseded by FHIR Connector Extension (3.6) Before continuing, read the FHIR Technology Preview 2 overview and user guide if you haven't already: Overview User Guide (TP2) This guide is separated into the followin
Page: Examples and Tutorials
This space is for adding example and tutorials for writing channels.
Page: Extension Installation
Before attempting to install the plugin(s), log in to the Mirth Connect Administrator and create a backup by going to Settings -> Backup Config. Log in to the Mirth Connect Administrator, click on the link for Extensions, browse for the extension on your
Page: FHIR Code Template Type
This code template type uses the FHIR Resource Builder to create a new FHIR resource or data type. Once created, you can store the object in a map (such as the channel map) or return the object directly from the function itself. This code template creates
Page: FHIR Connector Extension (3.6)
Overview FHIR (Fast Healthcare Interoperability Resources) is a new set of HL7 healthcare standards. Its main focus is on the ease of implementation, based on RESTful HTTP using XML or JSON. Components called "Resources" are used to store and exchange dat
Page: FHIR Data Type
As you may already know, FHIR resources are typically found in either XML or JSON formats. If you are building a FHIR client or server and only need to support one of those formats, then using either the XML or JSON data types will work fine. However this
Page: FHIR Listener
Page: FHIR Resource Builder
This feature is used on the FHIR Sender, FHIR Transformer Step Type, and FHIR Code Template Type. It provides an easy, graphically driven way to create or learn about the structure of FHIR resources or data types. FHIR Resource Builder FHIR Resource Build
Page: FHIR Sender
Page: FHIR Technology Preview 1
Note: This preview is now obsolete and superseded by Technology Preview 2. Overview FHIR (Fast Healthcare Interoperability Resources) is a new set of HL7 healthcare standards. Its main focus is on the ease of implementation, based on RESTful HTTP using
Page: FHIR Technology Preview 2
Note: This preview is now obsolete and superseded by FHIR Connector Extension (3.6) Overview FHIR (Fast Healthcare Interoperability Resources) is a new set of HL7 healthcare standards. Its main focus is on the ease of implementation, based on RESTful HTTP
Page: FHIR Transformer Step Type
This transformer step uses the FHIR Resource Builder to create a new FHIR resource or data type. Once created, you can store the object in a map (such as the channel map) or as a variable local to the transformer, to use in a subsequent step. In the upper
Page: File Chunking with Mirth Connect
Introduction Moving large files (greater than 10MB) between systems using Mirth Connect can be a challenge since the entire file must be read into memory before it is sent to the destination. This will often result in "java.lang.OutOfMemoryError: Java hea
Page: General Information (Official)
Page: Generating Resource Narratives
Almost all resources can include a human-readable narrative describing the resource. This is an XHTML div element contained in the "narrative" node of the XML/JSON. More information: Narrative This technology preview utilizes HAPI FHIR and Thymeleaf to he
Page: Getting / Installing
Getting the FHIR Connector Download the FHIR Connector here: https://www.mirth.com Installing the FHIR Connector The FHIR Connector is installed like any other Mirth Connect extension. This can be done through the Mirth Connect Administrator in the Extens
Page: Getting Started Guide
This Getting Started Guide matches the README.txt found in Mirth Connect 3.0. Guides for other Mirth Connect versions should be similar and can be found in the docs folder of the installation directory. 1. General Information Mirth Connect is an open sour
Page: Handling Responses
Let's say you've set up a destination that specifically handles the "create" interaction. Once you've created the resource and stored it (for example, in a database somewhere), the next step is to return a proper response back to the client. Each interact
Page: HL7 2.3 pipehat file to HL7 2.3 pipehat file modifying a few MSH fields example
It seems pretty hard to find simple example channels, so I thought I'd share one I created. This channel reads an HL7 2.3 pipehat file, modifies a few fields in the MSH segment, then writes an HL7 2.3 pipehat file. It may not be the best way, but it is si
Page: HL7 v2.x to FHIR Conversions
Before continuing, read the FHIR Connector overview and user guide if you haven't already: Overview User Guide Along with the Example Channel, we're also providing some sample code templates, transformers, and channels to help you kickstart any HL7 v2.x t
Home page: Home
Welcome to the Mirth Connect community wiki. Any pages or groups of pages marked as "official" are created and maintained by Mirth, while all other pages are driven by the Mirth Community. We welcome all users to contribute tips, hints and suggestions for
Page: How to create and invoke custom Java code in Mirth Connect
This guide will show you how to create a custom Java class, compile/package it into a JAR, include it in Mirth Connect, and invoke it in JavaScript. Your custom code can be invoked from any JavaScript context, including the global/channel scripts, filters
Page: How to run Mirth Connect on IBM JVM
Mirth Connect is configured by default to run on the Sun Java JVM. However, with some minor changes, you can have it run on IBM's JVM. Note that this fix only works with Mirth Connect 1.8.2 or later. Step 1: Edit the $MIRTH_HOME/conf/mirth.properties file
Page: How-to articles
Page: Index
{index}{index}
Page: Inserting values into an Informix TEXT column
It is not possible to directly insert a String into an INFORMIX TEXT column. It is necessary to get the data from InputStream source and to inset the stream using the PreparedStatement.setAsciiStream() method. If the data is contained into a String, it is
Page: Installing and configuring MS SQL Server 2008
Installation Before you proceed make sure you sure your system is up to date (Windows Update) and that you have the most recent version of the .NET framework (http://www.microsoft.com/net/download) Download and install SQL Server 2008 R2 Express with Tool
Page: Interacting With Your Server in a Browser
You can also view resources from your FHIR server in any modern browser. For example, the capability statement: Or, searching on a particular patient: If anything goes wrong and the server returns an OperationOutcome, you will see that as well: The web pa
Page: JavaScript Reference
The Reference Guide for any Mirth version contains the Reference List:http://www.mirthproject.org/community/wiki/display/mirthuserguidev1r8p0/Reference+List For universal JavaScript Functions, check out the JavaScript reference here:http://www.w3schools.c
Page: Map XML to custom XML and insert into DB
The first tab defines that XML is being read and this channel will auto start. 2.2.4XML Inbound Directory Clicking on the Source tab will show which directory is being read to find the XML content and the file name format required to process. Note that th
Page: Mapping HL7 fields to database values
Replace HL7 field with a database value: //assign values to variable.
//Variables are of type Mapper from HL7 message. var drNum =
Page: Mapping Multiple Segments to a Database
This post will explain the likely situation where you need to process more than one segment of the same type from your current HL-7 message to a database. For example, consider an ADT^A04 with multiple NK1 segments for multiple next of kins. Now, if we wa
Page: Mirth Connect 1.8 to 2.0 Upgrade Guide
Welcome to Mirth Connect 2.0! For the most part, the upgrade process from 1.8.x is managed by Mirth Connect on startup (for example, updating of channel properties). However, there are a few steps that must be performed before upgrading to tell Mirth Conn
Page: Mirth Connect 2.0 to 2.1 Upgrade Guide
This guide is for upgrading your Mirth Connect 2.0.0 or 2.0.1 installation to Mirth Connect 2.1. If you are upgrading from Mirth Connect 1.8, please follow the Mirth Connect 1.8 to 2.0 Upgrade Guide. There are a few steps that must be performed before upg
Page: Mirth Connect 2.0.0 to 2.0.1 Upgrade Guide
This guide is for upgrading your Mirth Connect 2.0.0 installation to Mirth Connect 2.0.1. If you are upgrading from Mirth Connect 1.8, please follow the Mirth Connect 1.8 to 2.0 Upgrade Guide. There are a few steps that must be performed before upgrading
Page: Mirth Connect 2.2
Page: Mirth Connect 2.2.2 - Release Notes
Page: Mirth Connect 2.2.3 - Release Notes
Page: Mirth Connect 3.0
Page: Mirth Connect 3.0.0 - Release Notes
Page: Mirth Connect 3.0.0 - What's New
Mirth Connect Connect 3.0 introduces hundreds of new features over Mirth Connect 2. It features a new internal messaging engine, designed and written from the ground up by Mirth, focusing on durability (guaranteed delivery), performance, and configurabili
Page: Mirth Connect 3.0.1 - Release Notes
Page: Mirth Connect 3.0.2 - Release Notes
Page: Mirth Connect 3.0.3 - Release Notes
Page: Mirth Connect 3.1
Page: Mirth Connect 3.1.0 - Release Notes
Page: Mirth Connect 3.1.0 - What's New
Mirth Connect Connect 3.1 introduces over a hundred new features, improvements, and bug fixes. It features universal batch support for all data types, connector enhancements, and many other features designed to help you manage your channels. Batch Process
Page: Mirth Connect 3.1.1 - Release Notes
Page: Mirth Connect 3.2
Page: Mirth Connect 3.2.0 - Release Notes
Page: Mirth Connect 3.2.0 - What's New
New and Improved JavaScript Editor! Code Completion Code Folding Multi-line Tab & Commenting Auto Indent & Bracket Matching Macros Also Featuring Line wrapping Customizable hotkey mappings Improved find and replace View tab and whitespace characte
Page: Mirth Connect 3.2.1 - Release Notes
Page: Mirth Connect 3.2.2 - Release Notes
Page: Mirth Connect 3.3
Page: Mirth Connect 3.3.0 - Release Notes
Page: Mirth Connect 3.3.0 - What's New
Mirth Connect 3.3 introduces almost a hundred new features, improvements, and bug fixes. It features enhanced code template support with the concept of code template libraries, improvements to the polling connector scheduling settings, a new JSON data typ
Page: Mirth Connect 3.3.1 - Release Notes
Page: Mirth Connect 3.3.2 - Release Notes
Page: Mirth Connect 3.4
Mirth Connect 3.4.2 - Release Notes Mirth Connect 3.4.1 - Release Notes Mirth Connect 3.4.0 - Release Notes Mirth Connect 3.4.0 - What's New
Page: Mirth Connect 3.4.0 - Release Notes
Page: Mirth Connect 3.4.0 - What's New
Mirth Connect 3.4 introduces dozens of new features, improvements, and bug fixes. Channel groups and dependencies add an entirely new level to managing your interfaces. It also features a new and easy to use REST API, HTTP authentication settings, configu
Page: Mirth Connect 3.4.1 - Release Notes
Page: Mirth Connect 3.4.2 - Release Notes
Page: Mirth Connect 3.5
Page: Mirth Connect 3.5.0 - Release Notes
Page: Mirth Connect 3.5.0 - What's New
Mirth Connect 3.5 introduces around a hundred new features, improvements, and bug fixes. Enhanced filtering for channel names / tags makes it even easier to manage and monitor your interfaces. Filter / Transformer Iterators allow you to loop through segme
Page: Mirth Connect 3.5.1 - Release Notes
Page: Mirth Connect 3.5.2 - Release Notes
Duo Multi-Factor Authentication Extension Duo Multi-Factor Authentication is a new commercial extension released along with version 3.5.2. It provides an extra layer of security for all user accounts. A secondary device such as a phone, tablet, or landlin
Page: Mirth Connect 3.6
Page: Mirth Connect 3.6.0 - Release Notes
Page: Mirth Connect 3.6.0 - What's New
Mirth Connect 3.6 introduces dozens of new features, improvements, and bug fixes. There's an explosion of interoperability options with the updated FHIR Connector, and the new Interoperability Connector Suite which supports PIX/PDQ/XDS.b/XCA/XCPD! A new M
Page: Mirth Connect 3.6.1 - Release Notes
Page: Mirth Connect 3.6.2 - Release Notes
Page: Mirth Connect 3.7
Page: Mirth Connect 3.7.0 - Release Notes
Page: Mirth Connect 3.7.0 - What's New
Mirth Connect 3.7 introduces dozens of new features, improvements, and bug fixes. Java support has expanded significantly, as Connect now supports Java 11, as well as most OpenJDK distributions. The database connections Connect uses can now be separated i
Page: Mirth Connect 3.7.1 - Release Notes
Page: Mirth Connect 3.8
Page: Mirth Connect 3.8.0 - Release Notes
Page: Mirth Connect 3.8.0 - What's New
Mirth Connect 3.8 is a minor stability update with a couple dozen bug fixes, some third-party library updates, and a few new features and improvements. Mirth Connect 3.8.0 - What's New Mirth Connect 3.8.0 - What's New Database Reader/Writer Driver improve
Page: Mirth Connect 3.8.1 - Release Notes
Page: Mirth Connect Code Formatting in Eclipse
When developing Mirth Connect in Eclipse, it is recommended to use the Mirth Connect code formatter to ensure that the source code is formatted consistently. Instructions Download the Mirth Connect code formatter XML file: Mirth Connect Formatter.xml. Fro
Page: Mirth Connect FAQ
This FAQ covers technical questions regarding Mirth Connect. For more general questions about Mirth Connect or Mirth Corporation, please see the Mirth Connect Product FAQ. What are the key components of the Mirth Connect architecture? Mirth Connect consis
Page: Mirth Connect Roadmap
This page explains some of the major changes planned for upcoming versions of Mirth Connect. For a full list of planned changes to Mirth Connect along with their version numbers, please visit the Mirth Connect Issue Tracker. Code Template Libraries - (Upd
Page: Mirth Connect Upgrade Guide
This guide is for upgrading your installation of Mirth Connect 2.1 or later. There are a few steps that must be performed before upgrading to backup your database and configuration properties. It is important to follow all of the steps below, to ensure th
Page: Mirth for Dummies
If you are here, you have probably gone through some of the tutorials, then decided to try doing something for yourself, and found that you were frustrated with what, to you, seems like it should be a simple process and you just can't get it to work. Rela
Page: Mirth Results Plugin Upgrade Guide
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Page: Modifying HL7 Messages
This is my not so valid HL7 v22 sample message: MSH|^~\&|SUNS1|OPN01|AZIS|CMD|200607261151||ADT^A01|1342749200|P|2.2 EVN|A01|200607270800 PID||4509276047^^58276|0187214^51286||JOHNSON^MARINA||19451027|F|||Townstreet 53PARIS8800^150||777/789456~0476 357737
Page: Moving Mirth Connect configuration from one database to another
Mirth Connect ships by default using the Apache Derby database. You may find yourself in a situation where you wish to move the Mirth Connect database to MySQL / PostgreSQL / Oracle / SQL Server, but you do not want to lose your configuration settings. Th
Page: queryDatabase Filter Example
//test existence of PatientId in database //other drivers names are located in your //Mirth Directory\conf\dbdrivers.xml //Simply use the value in the class= specification var driver = "net.sourceforge.jtds.jdbc.Driver"; var address = "jdbc:jtds:sqlserver
Page: Release Notes (Official)
Page: Selecting an Interation / Operation
If you haven't retrieved a remote capability statement, then by default the FHIR Sender will be populated with all known resources, interactions, operations, and parameters. Once you retrieve and cache a capability statement, only the interactions etc. su
Page: Server Configuration
Before starting the Mirth Connect server, there are some settings you might want to change: Ports: Used for communication between the administrator and the server Database drivers: JDBC drivers for connecting to different databases for the back-end Loggin
Page: Setting FHIR Listener Properties
After installing, you should now have "FHIR Listener" as one of your source connector options. You can see that it's quite similar to the HTTP Listener: A FHIR server provides a capability statement that gives clients an overview of the application. This
Page: Setting FHIR Sender Properties
After installing, you should now have "FHIR Sender" as one of your destination connector options. It is similar to the HTTP Sender: Retrieving and Viewing Capabilities The FHIR Sender has the ability to request a Capability Statement from the remote serve
Page: Setting up Mirth Connect 1.8.0 on IBM iSeries server
The following is what I had to do to get Mirth 1.8.0 to run on an IBM iSeries (AS/400) server. This addresses the issue of getting Mirth to run using the Sun SSL provider and making the JVM start using that provider. Create a folder named Mirth. It should
Page: Setting Up Mirth Using PostgreSQL
Purpose The point of this wiki is to give step by step instructions on how to set up a new installation of PSQL with the free windows mirth connect server prepackaged on this site. It's not insanely difficult, but I'd like to break it down into pieces for
Page: Simple HL7 2.x "pipes" to HL7 v2.x XML conversion
This channel reads HL7 v2.x encoded files from an input directory and writes hl7 v3.0 encoded XML to an output directory. Steps Create a new channel Summary Tab name it HL7toXML Click Set Data Types and make sure the sources are set to HL7 2.x and the des
Page: Source Code Contribution Guidelines
Mirth encourages contribution of patches, documentation, and components from the community. This document details guidelines for contributing and integrating contributed artifacts. Patches Patches should be submitted as a patch which can be created using
Page: Stop a Channel if it Errors
This example is a simple function that will stop a channel if it detects any errors. It is a simplified version of code written by glenn71 on the forums. It consists of two parts. The first is a function stored in code templates, and the second is a funct
Page: System Requirements
The Mirth Connect Server is a fully standalone application that does not require any sort of application server. The Mirth Connect Server and Mirth Connect Administrator are cross-platform applications that only require an Oracle JRE. Supported JRE versio
Page: The FhirUtil Utility Class
There is also a FhirUtil class accessible in JavaScript contexts. This contains methods to convert to and from XML/JSON, create special resource types like OperationOutcome, or generating resource narratives. Here are some of the most useful methods avail
Page: TreeNavigation
Index
Page: Tuning PostgreSQL for production use
We recommend PostgreSQL as the back-end database for production use of Mirth Connect (we use it on our appliances). Make sure you add the following lines to your configuration file: autovacuum=on autovacuum_vacuum_threshold=1000 This ensures that the data
Page: Tutorial using Mirth 1.3.2
http://www.generalbiodefense.com/wiki/index.php?title=Tutorial\_on\_HL7\_using\_Mirth\_and\_Nule.org\_tools by Jeremy Espino
Page: Upgrade Guides (Official)
As of Mirth Connect 2.1, there is only one required upgrade guide. Mirth Connect 2.1+ upgrading requires little to no user intervention, depending on your configuration, and skipping versions while upgrading requires no additional instruction. If you are
Page: User Guide
Before continuing, read the overview if you haven't already: Overview This guide is separated into the following sections:
Page: User Guide (TP1)
Note: This preview is now obsolete and superseded by Technology Preview 2. Before continuing, read the overview if you haven't already: Overview Getting the FHIR Listener Download the FHIR Technology Preview 1 here: https://info.mirth.com/Fast-Healthcar
Page: User Guide (TP2)
Note: This preview is now obsolete and superseded by FHIR Connector Extension (3.6) Before continuing, read the overview if you haven't already: Overview This guide is separated into the following sections: Getting / Installing Setting FHIR Listener Pro
Page: Using Apache HttpClient to HTTP GET a resource and stream it directly to a file
Here's a javascript transformer step I created to get a file via HTTP GET using Apache HttpClient v4.0.1. It shows how to: make calls to Java using importPackage instead of using the fully-qualified name on every object reference take advantage of the Ent
Page: Using E4X FAQ
Mirth uses Javascript with E4X internally for Filtering and Transformation. This FAQ is great for figuring out the E4X and Javascript syntax to transform messages inside of Mirth: http://web.archive.org/web/20090129224344/http://faqts.com/knowledge\_base/i
Page: Video & Photo Tutorials
Mirth Connect Demonstration Videos Very helpful in understanding the basics of Mirth Connect. http://www.mirthcorp.com/webinars/mirth-connect-screencast Mirth Videos by Dr Jaimin Patel (www.doc4child.com) Mirth Tutorial configuring MSSQL 2008 Mirth Tutori
Page: Working with Dates
There are a number of ways to work with dates in mirth. The simplest is using DateUtil, which is provided with Mirth, along with Date objects or strings. You can also use java, string functions, and regex to work with dates. For most cases, DateUtil shoul
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