Tools - quadram-institute-bioscience/gmh-sops GitHub Wiki

List of tools and packages

Release 2020.1 (February)

  • samtools=1.9 (latest being 1.10)
  • bbmap=38.75 (latest being 38.76)
  • kraken2=2.0.7_beta (latest being 2.0.8_beta)
  • spades=3.13.2 (latest being 3.14.0)
  • megahit=1.2.9
  • metaphlan2=2.96.1
  • virsorter=1.0.6