Lectures - pseudogene/aquaexcel GitHub Wiki

Workshop 1: Unix/Linux command systemHow do I use the command line?

Workshop 2: Basic scriptingHow to write reusable data analysis scripts

Workshop 3: Remote computingHow is bioinformatics practiced.

Workshop 4: Cloud computing

Workshop 5: Sequence formats

Workshop 6: Sequence qualityHow to evaluate and improve the sequencing data quality

Workshop 7: Sequence alignment (genomic)What sequence alignment are and how to control the algorithms.

Workshop 8: Sequence alignment (transcriptomic)

Workshop 9: 16S metagenomics

Workshop 10: Variation calling (SNP)How to detect small scale variation in genomic data

Workshop 11: RNA-Seq expression measurementLearn to perform RNA-Seq data analyses

Workshop 12: Markers developmentGBS/RAD-Seq

Workshop 13/14: Genome assemblywith short and long reads

Seminar: Xelect