Home - ppmitra/BICCN-Anatomy-Paper-Package GitHub Wiki

Welcome to the BICCN-Anatomy-Paper-Package wiki!

What is the BICCN Anatomy Package?

The BRAIN Initiative Cell Census Network is a consortium ... (for reference: https://knowledge.brain-map.org/program/biccn)

Links of interest

How to use the data and analysis resources?

Data modalities

Imaging data

Cell Density

Tracer injections

Single neuron tracings

Heterogeneity in dataset links e.g. fMOST swc table with detailed metadata Peng and Huang, or heteoregeneous data which need curation in BIL.

Analysis tools

Single neuron tracing

Yang Lab

Osten Lab

CAR

HortaCloud

nTracer2

Spatial registration and brain atlases

Example use cases

Further information

FAQ

Future directions