161215 Slight Progress - npslindstrom/DE-analysis GitHub Wiki

So it seems like the indexmake I did yesterday worked! This is great news.

I also tried to do an alignment of the first set of reads to the indexed genome that Linnea uploaded to the common project folder but that failed since it seems like uou need access to the entire genomeDir Directory generated using the star index maker.

Nevertheless I now have my own indexed reference genome to mess around with. Unfortunately I have placed it in my home directory so I seem to have overridden my allowed quota. I think I am just going to move the entire thing to the global directory and be done with it.

There is going to be a seminar later today regarding the poster presentation. That will be interesting. Linnea can't be there but hopefully Dorines and I can handle it.