WSL2_Analyze_tests - morphorm22/engine GitHub Wiki
1/31 Testing: runPlatoMathHelpersUnitTests 1/31 Test: runPlatoMathHelpersUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/PlatoMathHelpersUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runPlatoMathHelpersUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 4.3e-06)
Running unit tests ...
[GlenDows:1480001] *** Process received signal *** [GlenDows:1480001] Signal: Floating point exception (8) [GlenDows:1480001] Signal code: Invalid floating point operation (7) [GlenDows:1480001] Failing at address: 0x7f104efd9c48 [GlenDows:1480001] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f10540a5520] [GlenDows:1480001] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7f104efd9c48] [GlenDows:1480001] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7f104ef5988a] [GlenDows:1480001] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7f104eff9e53] [GlenDows:1480001] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7f104ecf1ab3] [GlenDows:1480001] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7f104edaec15] [GlenDows:1480001] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7f104f1bd303] [GlenDows:1480001] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7f104f1c6879] [GlenDows:1480001] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7f104f167628] [GlenDows:1480001] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7f104f16ac14] [GlenDows:1480001] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7f104f16ae99] [GlenDows:1480001] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7f105255ecf3] [GlenDows:1480001] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7f105404764f] [GlenDows:1480001] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7f1054056895] [GlenDows:1480001] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7f105d80ad82] [GlenDows:1480001] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7f105d80b255] [GlenDows:1480001] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/PlatoMathHelpersUnitTests(+0x68f6f)[0x5634ce00bf6f] [GlenDows:1480001] [17] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/PlatoMathHelpersUnitTests(_ZNK14PlatoUnitTests65PlatoAnalyzeUnitTests_PlatoMathHelpers_FromToBlockMatrix_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x3d)[0x5634ce00d78d] [GlenDows:1480001] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7f10549d5ceb] [GlenDows:1480001] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7f10549dbc63] [GlenDows:1480001] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7f10549ddb03] [GlenDows:1480001] [21] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7f10549de6e7] [GlenDows:1480001] [22] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/PlatoMathHelpersUnitTests(main+0x4f)[0x5634cdfe3b8f] [GlenDows:1480001] [23] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f105408cd90] [GlenDows:1480001] [24] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f105408ce40] [GlenDows:1480001] [25] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/PlatoMathHelpersUnitTests(_start+0x25)[0x5634cdfe3c85] [GlenDows:1480001] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
2/31 Testing: runBLASUnitTests 2/31 Test: runBLASUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BLASUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runBLASUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.6e-06)
Running unit tests ...
- PlatoAnalyzeUnitTests_PlatoMathHelpers_abs_UnitTest ... [Passed] (0.000146 sec)
- PlatoAnalyzeUnitTests_PlatoMathHelpers_dot_UnitTest ... [Passed] (0.000985 sec)
- PlatoAnalyzeUnitTests_PlatoMathHelpers_norm_UnitTest ... [Passed] (0.000112 sec)
- PlatoAnalyzeUnitTests_PlatoMathHelpers_sum_UnitTest ... [Passed] (7.7e-06 sec) [GlenDows:1480008] *** Process received signal *** [GlenDows:1480008] Signal: Floating point exception (8) [GlenDows:1480008] Signal code: Invalid floating point operation (7) [GlenDows:1480008] Failing at address: 0x7fc7feb35c48 [GlenDows:1480008] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fc80dfda520] [GlenDows:1480008] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7fc7feb35c48] [GlenDows:1480008] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7fc7feab588a] [GlenDows:1480008] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7fc7feb55e53] [GlenDows:1480008] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7fc7fe84dab3] [GlenDows:1480008] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7fc7fe90ac15] [GlenDows:1480008] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7fc7fed19303] [GlenDows:1480008] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7fc7fed22879] [GlenDows:1480008] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7fc7fecc3628] [GlenDows:1480008] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7fc7fecc6c14] [GlenDows:1480008] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7fc7fecc6e99] [GlenDows:1480008] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7fc802264cf3] [GlenDows:1480008] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7fc80579364f] [GlenDows:1480008] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7fc8057a2895] [GlenDows:1480008] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7fc80ef38d82] [GlenDows:1480008] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7fc80ef39255] [GlenDows:1480008] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BLASUnitTests(_ZNK9BLASTests52PlatoAnalyzeUnitTests_PlatoMathHelpers_fill_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0xf8)[0x55f6d5579c98] [GlenDows:1480008] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7fc80e90aceb] [GlenDows:1480008] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7fc80e910c63] [GlenDows:1480008] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7fc80e912b03] [GlenDows:1480008] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7fc80e9136e7] [GlenDows:1480008] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BLASUnitTests(main+0x4f)[0x55f6d55779af] [GlenDows:1480008] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fc80dfc1d90] [GlenDows:1480008] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fc80dfc1e40] [GlenDows:1480008] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BLASUnitTests(_start+0x25)[0x55f6d5577aa5] [GlenDows:1480008] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
3/31 Testing: runElectroThermalUnitTests 3/31 Test: runElectroThermalUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElectroThermalUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runElectroThermalUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 1.8e-06)
Running unit tests ...
[GlenDows:1480015] *** Process received signal *** [GlenDows:1480015] Signal: Floating point exception (8) [GlenDows:1480015] Signal code: Invalid floating point operation (7) [GlenDows:1480015] Failing at address: 0x7f08f1c9ec48 [GlenDows:1480015] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f08f6d6a520] [GlenDows:1480015] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7f08f1c9ec48] [GlenDows:1480015] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7f08f1c1e88a] [GlenDows:1480015] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7f08f1cbee53] [GlenDows:1480015] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7f08f19b6ab3] [GlenDows:1480015] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7f08f1a73c15] [GlenDows:1480015] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7f08f1e82303] [GlenDows:1480015] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7f08f1e8b879] [GlenDows:1480015] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7f08f1e2c628] [GlenDows:1480015] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7f08f1e2fc14] [GlenDows:1480015] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7f08f1e2fe99] [GlenDows:1480015] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7f08f5223cf3] [GlenDows:1480015] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7f08f6d0c64f] [GlenDows:1480015] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7f08f6d1b895] [GlenDows:1480015] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7f09004cfd82] [GlenDows:1480015] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7f09004d0255] [GlenDows:1480015] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElectroThermalUnitTests(_ZNK14ElectroThermal62PlatoAnalyzeUnitTests_FactoryVolumetricForceEvaluator_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x102)[0x5603174626f2] [GlenDows:1480015] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7f08f769aceb] [GlenDows:1480015] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7f08f76a0c63] [GlenDows:1480015] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7f08f76a2b03] [GlenDows:1480015] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7f08f76a36e7] [GlenDows:1480015] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElectroThermalUnitTests(main+0x4f)[0x56031746043f] [GlenDows:1480015] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f08f6d51d90] [GlenDows:1480015] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f08f6d51e40] [GlenDows:1480015] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElectroThermalUnitTests(_start+0x25)[0x560317460535] [GlenDows:1480015] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
4/31 Testing: runEllipticNitscheUnitTests 4/31 Test: runEllipticNitscheUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/EllipticNitscheUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runEllipticNitscheUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 3.6e-06)
Running unit tests ...
- EllipticNitscheTests_MaterialIsotropicElastic_UnitTest ... [Passed] (0.000279 sec) [GlenDows:1480022] *** Process received signal *** [GlenDows:1480022] Signal: Floating point exception (8) [GlenDows:1480022] Signal code: Invalid floating point operation (7) [GlenDows:1480022] Failing at address: 0x7f9f0b053c48 [GlenDows:1480022] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f9f1011f520] [GlenDows:1480022] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7f9f0b053c48] [GlenDows:1480022] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7f9f0afd388a] [GlenDows:1480022] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7f9f0b073e53] [GlenDows:1480022] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7f9f0ad6bab3] [GlenDows:1480022] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7f9f0ae28c15] [GlenDows:1480022] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7f9f0b237303] [GlenDows:1480022] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7f9f0b240879] [GlenDows:1480022] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7f9f0b1e1628] [GlenDows:1480022] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7f9f0b1e4c14] [GlenDows:1480022] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7f9f0b1e4e99] [GlenDows:1480022] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7f9f0e5d8cf3] [GlenDows:1480022] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7f9f100c164f] [GlenDows:1480022] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7f9f100d0895] [GlenDows:1480022] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7f9f19884d82] [GlenDows:1480022] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7f9f19885255] [GlenDows:1480022] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/EllipticNitscheUnitTests(_ZNK20EllipticNitscheTests42EllipticNitscheTests_StrainTensor_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x8e)[0x557090fbfd2e] [GlenDows:1480022] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7f9f10a4fceb] [GlenDows:1480022] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7f9f10a55c63] [GlenDows:1480022] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7f9f10a57b03] [GlenDows:1480022] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7f9f10a586e7] [GlenDows:1480022] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/EllipticNitscheUnitTests(main+0x4f)[0x557090fbb96f] [GlenDows:1480022] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f9f10106d90] [GlenDows:1480022] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f9f10106e40] [GlenDows:1480022] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/EllipticNitscheUnitTests(_start+0x25)[0x557090fbba65] [GlenDows:1480022] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
5/31 Testing: runLinearMaterialModelUnitTests 5/31 Test: runLinearMaterialModelUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/LinearMaterialModelUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runLinearMaterialModelUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 3.9e-06)
Running unit tests ...
- LinearElasticMaterialTest_Orthotropic1D_UnitTest ... [Passed] (0.000133 sec)
- LinearElasticMaterialTest_Orthotropic1D_PoissonRatioKeyword_Error_UnitTest ... [Passed] (9.17e-05 sec)
- LinearElasticMaterialTest_Orthotropic1D_YoungModulusKeyword_Error_UnitTest ... [Passed] (2.75e-05 sec)
- LinearElasticMaterialTest_Orthotropic2D_UnitTest ... [Passed] (5.39e-05 sec)
- LinearElasticMaterialTest_Orthotropic2D_PoissonRatioKeyword_Error_UnitTest ... [Passed] (3.36e-05 sec)
- LinearElasticMaterialTest_Orthotropic2D_ShearModulusKeyword_Error_UnitTest ... [Passed] (2.69e-05 sec)
- LinearElasticMaterialTest_Orthotropic2D_YoungsModulusXKeyword_Error_UnitTest ... [Passed] (3.32e-05 sec)
- LinearElasticMaterialTest_Orthotropic2D_YoungsModulusYKeyword_Error_UnitTest ... [Passed] (3.46e-05 sec)
- LinearElasticMaterialTest_Orthotropic2D_YoungsModulusXCondition_Error_UnitTest ... [Passed] (3.44e-05 sec)
- LinearElasticMaterialTest_Orthotropic2D_YoungsModulusYCondition_Error_UnitTest ... [Passed] (2.72e-05 sec)
- LinearElasticMaterialTest_Orthotropic2D_PoissonRatioXYCondition_Error_UnitTest ... [Passed] (5e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_UnitTest ... [Passed] (0.000134 sec)
- LinearElasticMaterialTest_Orthotropic3D_YoungsModulusXKeyword_Error_UnitTest ... [Passed] (5.33e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_YoungsModulusYKeyword_Error_UnitTest ... [Passed] (5.18e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_YoungsModulusZKeyword_Error_UnitTest ... [Passed] (5.02e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_ShearModulusYZKeyword_Error_UnitTest ... [Passed] (5.16e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_ShearModulusXZKeyword_Error_UnitTest ... [Passed] (5.16e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_ShearModulusXYKeyword_Error_UnitTest ... [Passed] (4.88e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_PoissonsRatioXYKeyword_Error_UnitTest ... [Passed] (5.14e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_PoissonsRatioXZKeyword_Error_UnitTest ... [Passed] (4.81e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_PoissonsRatioYZKeyword_Error_UnitTest ... [Passed] (4.8e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_YoungsModulusXCondition_Error_UnitTest ... [Passed] (4.7e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_YoungsModulusYCondition_Error_UnitTest ... [Passed] (4.78e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_YoungsModulusZCondition_Error_UnitTest ... [Passed] (4.67e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_ShearModulusXYCondition_Error_UnitTest ... [Passed] (4.67e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_ShearModulusXZCondition_Error_UnitTest ... [Passed] (4.68e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_ShearModulusYZCondition_Error_UnitTest ... [Passed] (4.7e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_PoissonRationXYCondition_Error_UnitTest ... [Passed] (4.74e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_PoissonRationXZCondition_Error_UnitTest ... [Passed] (4.74e-05 sec)
- LinearElasticMaterialTest_Orthotropic3D_PoissonRationYZCondition_Error_UnitTest ... [Passed] (4.65e-05 sec)
Total Time: 0.00238 sec
Summary: total = 30, run = 30, passed = 30, failed = 0
Test Passed. "runLinearMaterialModelUnitTests" end time: Dec 21 04:37 MST "runLinearMaterialModelUnitTests" time elapsed: 00:00:00
6/31 Testing: runPlatoMaterialModelUnitTests 6/31 Test: runPlatoMaterialModelUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/PlatoMaterialModelUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runPlatoMaterialModelUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.4e-06)
Running unit tests ...
- PlatoAnalyzeUnitTests_PlatoMaterialModel_ScalarFunctor_UnitTest ... [Passed] (0.000208 sec)
- PlatoAnalyzeUnitTests_PlatoMaterialModel_TensorConstant_UnitTest ... [Passed] (1.41e-05 sec)
- PlatoAnalyzeUnitTests_PlatoMaterialModel_TensorFunctor_UnitTest ... [Passed] (0.000168 sec)
- PlatoAnalyzeUnitTests_PlatoMaterialModel_Rank4VoigtFunctor_UnitTest ... [Passed] (0.00115 sec)
- PlatoAnalyzeUnitTests_PlatoMaterialModel_Rank4VoigtConstant_UnitTest ... [Passed] (0.000138 sec)
- PlatoAnalyzeUnitTests_PlatoMaterialModel_IsotropicStiffnessFunctor_UnitTest ... [Passed] (0.00101 sec)
- PlatoAnalyzeUnitTests_PlatoMaterialModel_IsotropicStiffnessConstant_UnitTest ... [Passed] (0.000129 sec)
- PlatoAnalyzeUnitTests_PlatoMaterialModel_MaterialModel_UnitTest ... [Passed] (0.00028 sec)
Total Time: 0.00345 sec
Summary: total = 8, run = 8, passed = 8, failed = 0
Test Passed. "runPlatoMaterialModelUnitTests" end time: Dec 21 04:37 MST "runPlatoMaterialModelUnitTests" time elapsed: 00:00:00
7/31 Testing: runMaterialBasisUnitTests 7/31 Test: runMaterialBasisUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/MaterialBasisUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runMaterialBasisUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 1.7e-06)
Running unit tests ...
- PlatoAnalyzeUnitTests_MaterialBasis_Parse_3D_UnitTest ...
REPORT: Reading basis Normalizing vector{0.00000000000000000e+00, -2.00000000000000000e+00, 0.00000000000000000e+00}
REPORT: Reading basis Normalizing vector{2.00000000000000000e+00, 0.00000000000000000e+00, 0.00000000000000000e+00}
[Passed] (0.000271 sec)
- PlatoAnalyzeUnitTests_MaterialBasis_Parse_2D_UnitTest ...
REPORT: Reading basis Normalizing vector{0.00000000000000000e+00, -2.00000000000000000e+00}
[Passed] (0.000149 sec) 2. PlatoAnalyzeUnitTests_MaterialBasis_TransformVector_3D_UnitTest ... [Passed] (9.57e-05 sec) 3. PlatoAnalyzeUnitTests_MaterialBasis_TransformTensorFromBasis_3D_UnitTest ... [Passed] (8.66e-05 sec)
Total Time: 0.000928 sec
Summary: total = 4, run = 4, passed = 4, failed = 0
Test Passed. "runMaterialBasisUnitTests" end time: Dec 21 04:37 MST "runMaterialBasisUnitTests" time elapsed: 00:00:00
8/31 Testing: runReadDataUnitTests 8/31 Test: runReadDataUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ReadDataUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runReadDataUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.4e-06)
Running unit tests ...
- PlatoAnalyzeUnitTests_getFileExtensionV_UnitTest ... [Passed] (5e-06 sec)
- PlatoAnalyzeUnitTests_trim_UnitTest ... [Passed] (4.1e-06 sec)
- PlatoAnalyzeUnitTests_split_UnitTest ... [Passed] (1.33e-05 sec) [GlenDows:1480050] *** Process received signal *** [GlenDows:1480050] Signal: Floating point exception (8) [GlenDows:1480050] Signal code: Invalid floating point operation (7) [GlenDows:1480050] Failing at address: 0x7f8b0a21cc48 [GlenDows:1480050] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f8b0f40e520] [GlenDows:1480050] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7f8b0a21cc48] [GlenDows:1480050] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7f8b0a19c88a] [GlenDows:1480050] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7f8b0a23ce53] [GlenDows:1480050] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7f8b09f34ab3] [GlenDows:1480050] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7f8b09ff1c15] [GlenDows:1480050] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7f8b0a400303] [GlenDows:1480050] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7f8b0a409879] [GlenDows:1480050] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7f8b0a3aa628] [GlenDows:1480050] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7f8b0a3adc14] [GlenDows:1480050] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7f8b0a3ade99] [GlenDows:1480050] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7f8b0d8c7cf3] [GlenDows:1480050] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7f8b0f3b064f] [GlenDows:1480050] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7f8b0f3bf895] [GlenDows:1480050] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7f8b18a4dd82] [GlenDows:1480050] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7f8b18a4e255] [GlenDows:1480050] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ReadDataUnitTests(_ZNK14PlatoUnitTests38PlatoAnalyzeUnitTests_readCSV_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x3f7)[0x55b60e886a57] [GlenDows:1480050] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7f8b0fd3eceb] [GlenDows:1480050] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7f8b0fd44c63] [GlenDows:1480050] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7f8b0fd46b03] [GlenDows:1480050] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7f8b0fd476e7] [GlenDows:1480050] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ReadDataUnitTests(main+0x4f)[0x55b60e88257f] [GlenDows:1480050] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f8b0f3f5d90] [GlenDows:1480050] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f8b0f3f5e40] [GlenDows:1480050] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ReadDataUnitTests(_start+0x25)[0x55b60e882675] [GlenDows:1480050] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
9/31 Testing: runPlatoSpatialModelUnitTests 9/31 Test: runPlatoSpatialModelUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/PlatoSpatialModelUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runPlatoSpatialModelUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.2e-06)
Running unit tests ...
[GlenDows:1480057] *** Process received signal *** [GlenDows:1480057] Signal: Floating point exception (8) [GlenDows:1480057] Signal code: Invalid floating point operation (7) [GlenDows:1480057] Failing at address: 0x7fe7ec6e0c48 [GlenDows:1480057] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fe7f17ac520] [GlenDows:1480057] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7fe7ec6e0c48] [GlenDows:1480057] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7fe7ec66088a] [GlenDows:1480057] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7fe7ec700e53] [GlenDows:1480057] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7fe7ec3f8ab3] [GlenDows:1480057] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7fe7ec4b5c15] [GlenDows:1480057] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7fe7ec8c4303] [GlenDows:1480057] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7fe7ec8cd879] [GlenDows:1480057] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7fe7ec86e628] [GlenDows:1480057] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7fe7ec871c14] [GlenDows:1480057] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7fe7ec871e99] [GlenDows:1480057] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7fe7efc65cf3] [GlenDows:1480057] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7fe7f174e64f] [GlenDows:1480057] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7fe7f175d895] [GlenDows:1480057] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7fe7faf11d82] [GlenDows:1480057] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7fe7faf12255] [GlenDows:1480057] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/PlatoSpatialModelUnitTests(_ZNK14PlatoUnitTests40PlatoAnalyzeUnitTests_PlatoMask_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x142)[0x55c34e44fb22] [GlenDows:1480057] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7fe7f20dcceb] [GlenDows:1480057] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7fe7f20e2c63] [GlenDows:1480057] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7fe7f20e4b03] [GlenDows:1480057] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7fe7f20e56e7] [GlenDows:1480057] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/PlatoSpatialModelUnitTests(main+0x4f)[0x55c34e44d3bf] [GlenDows:1480057] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fe7f1793d90] [GlenDows:1480057] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fe7f1793e40] [GlenDows:1480057] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/PlatoSpatialModelUnitTests(_start+0x25)[0x55c34e44d4b5] [GlenDows:1480057] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
10/31 Testing: runElementUnitTests 10/31 Test: runElementUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElementUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runElementUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 1.13e-05)
Running unit tests ...
- Bar2_Bar2_Constants_UnitTest ... [Passed] (3.5e-06 sec)
- Bar2_MechanicsBar2_Constants_UnitTest ... [Passed] (2.8e-06 sec)
- Bar2_BasisFunctions_UnitTest ... [Passed] (2.65e-05 sec)
- Bar2_BasisFunctionGradients_UnitTest ... [Passed] (9.2e-06 sec)
- Bar3_Bar3_Constants_UnitTest ... [Passed] (2.2e-06 sec)
- Bar3_MechanicsBar3_Constants_UnitTest ... [Passed] (5.8e-06 sec)
- Bar3_Bar3_BasisFunctions_UnitTest ... [Passed] (5.6e-06 sec)
- Bar3_Bar3_BasisFunctionGradients_UnitTest ... [Passed] (9.2e-06 sec)
- Hex27_Hex27_Constants_UnitTest ... [Passed] (2.6e-06 sec)
- Hex27_MechanicsHex27_Constants_UnitTest ... [Passed] (2.6e-06 sec)
- Hex27_MechanicsHex27_CubWeightsSum_UnitTest ... [Passed] (5e-06 sec)
- Hex27_MechanicsHex27_FaceCubPoints_UnitTest ... [Passed] (7.82e-05 sec)
- Hex27_Hex27_FaceCubWeights_UnitTest ... [Passed] (6.4e-06 sec)
- Hex27_BasisFunctions_UnitTest ... [Passed] (0.00015 sec)
- Hex27_BasisFunctionGradients_UnitTest ... [Passed] (0.000158 sec)
- Hex8_Hex8_Constants_UnitTest ... [Passed] (1.6e-06 sec)
- Hex8_MechanicsHex8_Constants_UnitTest ... [Passed] (2.7e-06 sec)
- Hex8_MechanicsHex8_FaceCubPoints_UnitTest ... [Passed] (1.98e-05 sec)
- Hex8_Hex8_FaceCubWeights_UnitTest ... [Passed] (3.8e-06 sec)
- Hex8_MechanicsHex8_CubWeightsSum_UnitTest ... [Passed] (3.6e-06 sec)
- Hex8_BasisFunctions_UnitTest ... [Passed] (0.000116 sec)
- Hex8_BasisFunctionGradients_UnitTest ... [Passed] (5.09e-05 sec)
- Hex8_JacobianParentCoords_UnitTest ... [Passed] (2.37e-05 sec)
- Quad4_Quad4_Constants_UnitTest ... [Passed] (2.7e-06 sec)
- Quad4_MechanicsQuad4_Constants_UnitTest ... [Passed] (2.6e-06 sec)
- Quad4_MechanicsQuad4_FaceCubPoints_UnitTest ... [Passed] (7.7e-06 sec)
- Quad4_Quad4_FaceCubWeights_UnitTest ... [Passed] (7.7e-06 sec)
- Quad4_BasisFunctions_UnitTest ... [Passed] (1.77e-05 sec)
- Quad4_BasisFunctionGradients_UnitTest ... [Passed] (2.35e-05 sec)
- Quad9_Quad9_Constants_UnitTest ... [Passed] (2.1e-06 sec)
- Quad9_Quad9_FaceCubPoints_UnitTest ... [Passed] (9.8e-06 sec)
- Quad9_Quad9_FaceCubWeights_UnitTest ... [Passed] (4.7e-06 sec)
- Quad9_MechanicsQuad9_Constants_UnitTest ... [Passed] (2.4e-06 sec)
- Quad9_BasisFunctions_UnitTest ... [Passed] (1.98e-05 sec)
- Quad9_BasisFunctionGradients_UnitTest ... [Passed] (4.02e-05 sec)
- Tet10_Tet10_Constants_UnitTest ... [Passed] (2.5e-06 sec)
- Tet10_Tet10_FaceCubPoints_UnitTest ... [Passed] (1.16e-05 sec)
- Tet10_Tet10_FaceCubWeights_UnitTest ... [Passed] (4.7e-06 sec)
- Tet10_MechanicsTet10_Constants_UnitTest ... [Passed] (2.4e-06 sec)
- Tet10_MechanicsTet10_CubWeightsSum_UnitTest ... [Passed] (4.9e-06 sec)
- Tet10_BasisFunctions_UnitTest ... [Passed] (2.38e-05 sec)
- Tet10_BasisFunctionGradients_UnitTest ... [Passed] (5.84e-05 sec) [GlenDows:1480064] *** Process received signal *** [GlenDows:1480064] Signal: Floating point exception (8) [GlenDows:1480064] Signal code: Invalid floating point operation (7) [GlenDows:1480064] Failing at address: 0x7fde5a2b7c48 [GlenDows:1480064] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fde68486520] [GlenDows:1480064] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7fde5a2b7c48] [GlenDows:1480064] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7fde5a23788a] [GlenDows:1480064] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7fde5a2d7e53] [GlenDows:1480064] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7fde59fcfab3] [GlenDows:1480064] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7fde5a08cc15] [GlenDows:1480064] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7fde5a49b303] [GlenDows:1480064] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7fde5a4a4879] [GlenDows:1480064] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7fde5a445628] [GlenDows:1480064] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7fde5a448c14] [GlenDows:1480064] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7fde5a448e99] [GlenDows:1480064] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7fde5d9d3cf3] [GlenDows:1480064] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7fde5fc3f64f] [GlenDows:1480064] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7fde5fc4e895] [GlenDows:1480064] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7fde68f0ed82] [GlenDows:1480064] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7fde68f0f255] [GlenDows:1480064] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElementUnitTests(_ZNK34Tet10_IntegrateExpression_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x98)[0x561a3ab32348] [GlenDows:1480064] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7fde68db6ceb] [GlenDows:1480064] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7fde68dbcc63] [GlenDows:1480064] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7fde68dbeb03] [GlenDows:1480064] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7fde68dbf6e7] [GlenDows:1480064] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElementUnitTests(main+0x4f)[0x561a3ab07e6f] [GlenDows:1480064] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fde6846dd90] [GlenDows:1480064] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fde6846de40] [GlenDows:1480064] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElementUnitTests(_start+0x25)[0x561a3ab07f65] [GlenDows:1480064] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
11/31 Testing: runPlatoMathTypesUnitTests 11/31 Test: runPlatoMathTypesUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/PlatoMathTypesUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runPlatoMathTypesUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 1.6e-06)
Running unit tests ...
- PlatoMathTypesTests_Matrix_UnitTest ... [Passed] (0.000304 sec)
- PlatoMathTypesTests_Math_UnitTest ... [Passed] (5.32e-05 sec)
- PlatoMathTypesTests_Eigen_UnitTest ... [Passed] (2.23e-05 sec)
- PlatoMathTypesTests_trace_UnitTest ... [Passed] (7.5e-06 sec)
Total Time: 0.000627 sec
Summary: total = 4, run = 4, passed = 4, failed = 0
Test Passed. "runPlatoMathTypesUnitTests" end time: Dec 21 04:37 MST "runPlatoMathTypesUnitTests" time elapsed: 00:00:00
12/31 Testing: runTensorNormUnitTests 12/31 Test: runTensorNormUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/TensorNormUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runTensorNormUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 1.5e-06)
Running unit tests ...
- TensorNormTests_VonMisesPNormDefaultVolumeScaling_UnitTest ... [Passed] (0.00017 sec)
- TensorNormTests_VonMisesPNormSpecifiedVolumeScaling_UnitTest ... [Passed] (7.82e-05 sec)
- TensorNormTests_VonMisesPNormNoVolumeScaling_UnitTest ... [Passed] (6.87e-05 sec)
Total Time: 0.000539 sec
Summary: total = 3, run = 3, passed = 3, failed = 0
Test Passed. "runTensorNormUnitTests" end time: Dec 21 04:37 MST "runTensorNormUnitTests" time elapsed: 00:00:00
13/31 Testing: runCrsMatrixUtilsUnitTests 13/31 Test: runCrsMatrixUtilsUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/CrsMatrixUtilsUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runCrsMatrixUtilsUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.3e-06)
Running unit tests ...
- CrsMatrixUtils_SparsityPatternSymmetric_UnitTest ... [Passed] (5.2e-06 sec)
- CrsMatrixUtils_SparsityPatternSymmetricFull_UnitTest ... [Passed] (2.1e-06 sec)
- CrsMatrixUtils_SparsityPatternNonsymmetricUpperTri_UnitTest ... [Passed] (1.6e-06 sec)
- CrsMatrixUtils_SparsityPatternNonsymmetricLowerTri_UnitTest ... [Passed] (1.6e-06 sec)
- CrsMatrixUtils_SparsityPatternHash_UnitTest ... [Passed] (7.7e-06 sec)
Total Time: 0.000293 sec
Summary: total = 5, run = 5, passed = 5, failed = 0
Test Passed. "runCrsMatrixUtilsUnitTests" end time: Dec 21 04:37 MST "runCrsMatrixUtilsUnitTests" time elapsed: 00:00:00
14/31 Testing: runThermostaticUnitTests 14/31 Test: runThermostaticUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ThermostaticUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runThermostaticUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.6e-06)
Running unit tests ...
- DerivativeTests_MaterialThermalConductionTwoPhaseAlloy_UnitTest ... [Passed] (0.000161 sec) [GlenDows:1480092] *** Process received signal *** [GlenDows:1480092] Signal: Floating point exception (8) [GlenDows:1480092] Signal code: Invalid floating point operation (7) [GlenDows:1480092] Failing at address: 0x7f0402cdbc48 [GlenDows:1480092] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f0407da7520] [GlenDows:1480092] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7f0402cdbc48] [GlenDows:1480092] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7f0402c5b88a] [GlenDows:1480092] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7f0402cfbe53] [GlenDows:1480092] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7f04029f3ab3] [GlenDows:1480092] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7f0402ab0c15] [GlenDows:1480092] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7f0402ebf303] [GlenDows:1480092] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7f0402ec8879] [GlenDows:1480092] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7f0402e69628] [GlenDows:1480092] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7f0402e6cc14] [GlenDows:1480092] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7f0402e6ce99] [GlenDows:1480092] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7f0406260cf3] [GlenDows:1480092] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7f0407d4964f] [GlenDows:1480092] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7f0407d58895] [GlenDows:1480092] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7f041150cd82] [GlenDows:1480092] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7f041150d255] [GlenDows:1480092] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ThermostaticUnitTests(_ZNK17ThermostaticTests44DerivativeTests_InternalThermalFlux_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x98)[0x564ddd9c08e8] [GlenDows:1480092] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7f04086d7ceb] [GlenDows:1480092] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7f04086ddc63] [GlenDows:1480092] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7f04086dfb03] [GlenDows:1480092] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7f04086e06e7] [GlenDows:1480092] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ThermostaticUnitTests(main+0x4f)[0x564ddd9b02af] [GlenDows:1480092] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f0407d8ed90] [GlenDows:1480092] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f0407d8ee40] [GlenDows:1480092] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ThermostaticUnitTests(_start+0x25)[0x564ddd9b03a5] [GlenDows:1480092] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
15/31 Testing: runElastostaticUnitTests 15/31 Test: runElastostaticUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElastostaticUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runElastostaticUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 3.6e-06)
Running unit tests ...
[GlenDows:1480099] *** Process received signal *** [GlenDows:1480099] Signal: Floating point exception (8) [GlenDows:1480099] Signal code: Invalid floating point operation (7) [GlenDows:1480099] Failing at address: 0x7fde74dfbc48 [GlenDows:1480099] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fde79ec7520] [GlenDows:1480099] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7fde74dfbc48] [GlenDows:1480099] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7fde74d7b88a] [GlenDows:1480099] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7fde74e1be53] [GlenDows:1480099] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7fde74b13ab3] [GlenDows:1480099] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7fde74bd0c15] [GlenDows:1480099] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7fde74fdf303] [GlenDows:1480099] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7fde74fe8879] [GlenDows:1480099] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7fde74f89628] [GlenDows:1480099] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7fde74f8cc14] [GlenDows:1480099] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7fde74f8ce99] [GlenDows:1480099] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7fde78380cf3] [GlenDows:1480099] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7fde79e6964f] [GlenDows:1480099] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7fde79e78895] [GlenDows:1480099] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7fde8362cd82] [GlenDows:1480099] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7fde8362d255] [GlenDows:1480099] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElastostaticUnitTests(_ZNK17ElastostaticTests48DerivativeTests_InternalElasticEnergy3D_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0xe3)[0x558c166cc483] [GlenDows:1480099] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7fde7a7f7ceb] [GlenDows:1480099] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7fde7a7fdc63] [GlenDows:1480099] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7fde7a7ffb03] [GlenDows:1480099] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7fde7a8006e7] [GlenDows:1480099] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElastostaticUnitTests(main+0x4f)[0x558c166bc30f] [GlenDows:1480099] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fde79eaed90] [GlenDows:1480099] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fde79eaee40] [GlenDows:1480099] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElastostaticUnitTests(_start+0x25)[0x558c166bc405] [GlenDows:1480099] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
16/31 Testing: runElastic_Tet10UnitTests 16/31 Test: runElastic_Tet10UnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/Elastic_Tet10UnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runElastic_Tet10UnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.9e-06)
Running unit tests ...
[GlenDows:1480106] *** Process received signal *** [GlenDows:1480106] Signal: Floating point exception (8) [GlenDows:1480106] Signal code: Invalid floating point operation (7) [GlenDows:1480106] Failing at address: 0x7f6bae2e9c48 [GlenDows:1480106] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f6bb33b5520] [GlenDows:1480106] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7f6bae2e9c48] [GlenDows:1480106] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7f6bae26988a] [GlenDows:1480106] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7f6bae309e53] [GlenDows:1480106] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7f6bae001ab3] [GlenDows:1480106] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7f6bae0bec15] [GlenDows:1480106] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7f6bae4cd303] [GlenDows:1480106] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7f6bae4d6879] [GlenDows:1480106] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7f6bae477628] [GlenDows:1480106] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7f6bae47ac14] [GlenDows:1480106] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7f6bae47ae99] [GlenDows:1480106] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7f6bb186ecf3] [GlenDows:1480106] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7f6bb335764f] [GlenDows:1480106] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7f6bb3366895] [GlenDows:1480106] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7f6bbcb1ad82] [GlenDows:1480106] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7f6bbcb1b255] [GlenDows:1480106] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/Elastic_Tet10UnitTests(_ZNK48DerivativeTests_InternalElasticEnergy3D_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0xe3)[0x555e0f81c973] [GlenDows:1480106] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7f6bb3ce5ceb] [GlenDows:1480106] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7f6bb3cebc63] [GlenDows:1480106] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7f6bb3cedb03] [GlenDows:1480106] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7f6bb3cee6e7] [GlenDows:1480106] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/Elastic_Tet10UnitTests(main+0x4f)[0x555e0f807bcf] [GlenDows:1480106] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f6bb339cd90] [GlenDows:1480106] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f6bb339ce40] [GlenDows:1480106] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/Elastic_Tet10UnitTests(_start+0x25)[0x555e0f807cc5] [GlenDows:1480106] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
17/31 Testing: runThermoelasticUnitTests 17/31 Test: runThermoelasticUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ThermoelasticUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runThermoelasticUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.1e-06)
Running unit tests ...
[GlenDows:1480113] *** Process received signal *** [GlenDows:1480113] Signal: Floating point exception (8) [GlenDows:1480113] Signal code: Invalid floating point operation (7) [GlenDows:1480113] Failing at address: 0x7fee6f768c48 [GlenDows:1480113] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fee74834520] [GlenDows:1480113] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7fee6f768c48] [GlenDows:1480113] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7fee6f6e888a] [GlenDows:1480113] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7fee6f788e53] [GlenDows:1480113] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7fee6f480ab3] [GlenDows:1480113] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7fee6f53dc15] [GlenDows:1480113] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7fee6f94c303] [GlenDows:1480113] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7fee6f955879] [GlenDows:1480113] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7fee6f8f6628] [GlenDows:1480113] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7fee6f8f9c14] [GlenDows:1480113] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7fee6f8f9e99] [GlenDows:1480113] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7fee72cedcf3] [GlenDows:1480113] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7fee747d664f] [GlenDows:1480113] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7fee747e5895] [GlenDows:1480113] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(_ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEdididi+0x15d)[0x7fee7df9753d] [GlenDows:1480113] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ThermoelasticUnitTests(_ZNK56PlatoAnalyzeUnitTests_VolAvgStressPNormAxial_3D_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x7a)[0x5559e2cbbc2a] [GlenDows:1480113] [16] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7fee75164ceb] [GlenDows:1480113] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7fee7516ac63] [GlenDows:1480113] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7fee7516cb03] [GlenDows:1480113] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7fee7516d6e7] [GlenDows:1480113] [20] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ThermoelasticUnitTests(main+0x4f)[0x5559e2cb895f] [GlenDows:1480113] [21] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fee7481bd90] [GlenDows:1480113] [22] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fee7481be40] [GlenDows:1480113] [23] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ThermoelasticUnitTests(_start+0x25)[0x5559e2cb8a55] [GlenDows:1480113] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
18/31 Testing: runAugLagStressUnitTests 18/31 Test: runAugLagStressUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/AugLagStressUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runAugLagStressUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 3.9e-06)
Running unit tests ...
- PlatoAnalyzeUnitTests_AugLag_Eigenvalue1D_UnitTest ... [Passed] (3.56e-05 sec)
- PlatoAnalyzeUnitTests_AugLag_Eigenvalue2D_UnitTest ... [Passed] (2.23e-05 sec)
- PlatoAnalyzeUnitTests_AugLag_Eigenvalue3D_UnitTest ... [Passed] (3.09e-05 sec) [GlenDows:1480120] *** Process received signal *** [GlenDows:1480120] Signal: Floating point exception (8) [GlenDows:1480120] Signal code: Invalid floating point operation (7) [GlenDows:1480120] Failing at address: 0x7fc6141ccc48 [GlenDows:1480120] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fc61a44c520] [GlenDows:1480120] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7fc6141ccc48] [GlenDows:1480120] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7fc61414c88a] [GlenDows:1480120] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7fc6141ece53] [GlenDows:1480120] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7fc613ee4ab3] [GlenDows:1480120] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7fc613fa1c15] [GlenDows:1480120] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7fc6143b0303] [GlenDows:1480120] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7fc6143b9879] [GlenDows:1480120] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7fc61435a628] [GlenDows:1480120] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7fc61435dc14] [GlenDows:1480120] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7fc61435de99] [GlenDows:1480120] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7fc618905cf3] [GlenDows:1480120] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7fc61a3ee64f] [GlenDows:1480120] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7fc61a3fd895] [GlenDows:1480120] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7fc6241add82] [GlenDows:1480120] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7fc6241ae255] [GlenDows:1480120] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/AugLagStressUnitTests(_ZNK16AugLagStressTest63PlatoAnalyzeUnitTests_AugLagQuadratic_EvaluateVonMises_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x98)[0x55f7abd5af88] [GlenDows:1480120] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7fc61ad7cceb] [GlenDows:1480120] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7fc61ad82c63] [GlenDows:1480120] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7fc61ad84b03] [GlenDows:1480120] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7fc61ad856e7] [GlenDows:1480120] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/AugLagStressUnitTests(main+0x4f)[0x55f7abd5174f] [GlenDows:1480120] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fc61a433d90] [GlenDows:1480120] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fc61a433e40] [GlenDows:1480120] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/AugLagStressUnitTests(_start+0x25)[0x55f7abd51845] [GlenDows:1480120] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
19/31 Testing: runElectrostaticsUnitTests 19/31 Test: runElectrostaticsUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElectrostaticsUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runElectrostaticsUnitTests" start time: Dec 21 04:37 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.6e-06)
Running unit tests ...
[GlenDows:1480127] *** Process received signal *** [GlenDows:1480127] Signal: Floating point exception (8) [GlenDows:1480127] Signal code: Invalid floating point operation (7) [GlenDows:1480127] Failing at address: 0x7fae60a42c48 [GlenDows:1480127] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fae65b0e520] [GlenDows:1480127] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7fae60a42c48] [GlenDows:1480127] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7fae609c288a] [GlenDows:1480127] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7fae60a62e53] [GlenDows:1480127] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7fae6075aab3] [GlenDows:1480127] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7fae60817c15] [GlenDows:1480127] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7fae60c26303] [GlenDows:1480127] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7fae60c2f879] [GlenDows:1480127] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7fae60bd0628] [GlenDows:1480127] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7fae60bd3c14] [GlenDows:1480127] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7fae60bd3e99] [GlenDows:1480127] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7fae63fc7cf3] [GlenDows:1480127] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7fae65ab064f] [GlenDows:1480127] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7fae65abf895] [GlenDows:1480127] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7fae6f273d82] [GlenDows:1480127] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7fae6f274255] [GlenDows:1480127] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElectrostaticsUnitTests(_ZNK18ElectrostaticsTest68PlatoAnalyzeUnitTests_CurrentDensityEvaluator_TwoPhaseAlloy_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x98)[0x55fa1ed4b798] [GlenDows:1480127] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7fae6643eceb] [GlenDows:1480127] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7fae66444c63] [GlenDows:1480127] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7fae66446b03] [GlenDows:1480127] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7fae664476e7] [GlenDows:1480127] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElectrostaticsUnitTests(main+0x4f)[0x55fa1ed46a6f] [GlenDows:1480127] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fae65af5d90] [GlenDows:1480127] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fae65af5e40] [GlenDows:1480127] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElectrostaticsUnitTests(_start+0x25)[0x55fa1ed46b65] [GlenDows:1480127] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
20/31 Testing: runElectroelasticUnitTests 20/31 Test: runElectroelasticUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElectroelasticUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runElectroelasticUnitTests" start time: Dec 21 04:38 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 8e-07)
Running unit tests ...
[GlenDows:1480134] *** Process received signal *** [GlenDows:1480134] Signal: Floating point exception (8) [GlenDows:1480134] Signal code: Invalid floating point operation (7) [GlenDows:1480134] Failing at address: 0x7f916e503c48 [GlenDows:1480134] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f91735cf520] [GlenDows:1480134] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7f916e503c48] [GlenDows:1480134] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7f916e48388a] [GlenDows:1480134] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7f916e523e53] [GlenDows:1480134] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7f916e21bab3] [GlenDows:1480134] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7f916e2d8c15] [GlenDows:1480134] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7f916e6e7303] [GlenDows:1480134] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7f916e6f0879] [GlenDows:1480134] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7f916e691628] [GlenDows:1480134] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7f916e694c14] [GlenDows:1480134] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7f916e694e99] [GlenDows:1480134] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7f9171a88cf3] [GlenDows:1480134] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7f917357164f] [GlenDows:1480134] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7f9173580895] [GlenDows:1480134] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7f917cd34d82] [GlenDows:1480134] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7f917cd35255] [GlenDows:1480134] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElectroelasticUnitTests(_ZNK59ElectroelasticTests_InternalElectroelasticEnergy3D_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0xc3)[0x5576901f0ea3] [GlenDows:1480134] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7f9173effceb] [GlenDows:1480134] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7f9173f05c63] [GlenDows:1480134] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7f9173f07b03] [GlenDows:1480134] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7f9173f086e7] [GlenDows:1480134] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElectroelasticUnitTests(main+0x4f)[0x5576901eef2f] [GlenDows:1480134] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f91735b6d90] [GlenDows:1480134] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f91735b6e40] [GlenDows:1480134] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElectroelasticUnitTests(_start+0x25)[0x5576901ef025] [GlenDows:1480134] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
21/31 Testing: runSolutionFunctionUnitTests 21/31 Test: runSolutionFunctionUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/SolutionFunctionUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runSolutionFunctionUnitTests" start time: Dec 21 04:38 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2e-06)
Running unit tests ...
[GlenDows:1480141] *** Process received signal *** [GlenDows:1480141] Signal: Floating point exception (8) [GlenDows:1480141] Signal code: Invalid floating point operation (7) [GlenDows:1480141] Failing at address: 0x7f51c4d5bc48 [GlenDows:1480141] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f51c9e27520] [GlenDows:1480141] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7f51c4d5bc48] [GlenDows:1480141] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7f51c4cdb88a] [GlenDows:1480141] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7f51c4d7be53] [GlenDows:1480141] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7f51c4a73ab3] [GlenDows:1480141] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7f51c4b30c15] [GlenDows:1480141] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7f51c4f3f303] [GlenDows:1480141] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7f51c4f48879] [GlenDows:1480141] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7f51c4ee9628] [GlenDows:1480141] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7f51c4eecc14] [GlenDows:1480141] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7f51c4eece99] [GlenDows:1480141] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7f51c82e0cf3] [GlenDows:1480141] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7f51c9dc964f] [GlenDows:1480141] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7f51c9dd8895] [GlenDows:1480141] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(_ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEdididi+0x15d)[0x7f51d358a53d] [GlenDows:1480141] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/SolutionFunctionUnitTests(_ZNK35DerivativeTests_Solution2D_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x92)[0x55563db9f562] [GlenDows:1480141] [16] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7f51ca757ceb] [GlenDows:1480141] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7f51ca75dc63] [GlenDows:1480141] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7f51ca75fb03] [GlenDows:1480141] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7f51ca7606e7] [GlenDows:1480141] [20] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/SolutionFunctionUnitTests(main+0x4f)[0x55563db9d84f] [GlenDows:1480141] [21] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f51c9e0ed90] [GlenDows:1480141] [22] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f51c9e0ee40] [GlenDows:1480141] [23] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/SolutionFunctionUnitTests(_start+0x25)[0x55563db9d945] [GlenDows:1480141] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
22/31 Testing: runSolverInterfaceUnitTests 22/31 Test: runSolverInterfaceUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/SolverInterfaceUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runSolverInterfaceUnitTests" start time: Dec 21 04:38 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 3.7e-06)
Running unit tests ...
- PlatoAnalyzeUnitTests_TachoSolver_NonBlockMatrix_UnitTest ... TachoSolver: Analyze ==================== Linear system A number of equations: 4
A is a small problem ( < 1024 ) and LAPACK is used
Time time for copying A into supernodes: 0.001402 s time for numeric factorization: 0.000187 s total time spent: 0.001589 s
Time time for extra work e.g.,copy rhs: 0.000006 s time for numeric solve: 0.000038 s total time spent: 0.000044 s
[Passed] (0.00225 sec)
- PlatoAnalyzeUnitTests_TachoSolver_AsymmetricSparsityPatternThrows_UnitTest ... TachoSolver: Release ==================== [Passed] (0.000254 sec)
- PlatoAnalyzeUnitTests_TachoSolver_BlockMatrix_UnitTest ... TachoSolver: Analyze ==================== Linear system A number of equations: 4
A is a small problem ( < 1024 ) and LAPACK is used
Time time for copying A into supernodes: 0.000010 s time for numeric factorization: 0.000006 s total time spent: 0.000016 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000005 s total time spent: 0.000006 s
[Passed] (0.00029 sec) [GlenDows:1480148] *** Process received signal *** [GlenDows:1480148] Signal: Floating point exception (8) [GlenDows:1480148] Signal code: Invalid floating point operation (7) [GlenDows:1480148] Failing at address: 0x7fdaa38e4c48 [GlenDows:1480148] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fdaa9528520] [GlenDows:1480148] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7fdaa38e4c48] [GlenDows:1480148] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7fdaa386488a] [GlenDows:1480148] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7fdaa3904e53] [GlenDows:1480148] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7fdaa35fcab3] [GlenDows:1480148] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7fdaa36b9c15] [GlenDows:1480148] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7fdaa3ac8303] [GlenDows:1480148] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7fdaa3ad1879] [GlenDows:1480148] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7fdaa3a72628] [GlenDows:1480148] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7fdaa3a75c14] [GlenDows:1480148] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7fdaa3a75e99] [GlenDows:1480148] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7fdaa79e1cf3] [GlenDows:1480148] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7fdaa94ca64f] [GlenDows:1480148] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7fdaa94d9895] [GlenDows:1480148] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7fdab38d2d82] [GlenDows:1480148] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7fdab38d3255] [GlenDows:1480148] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/SolverInterfaceUnitTests(_ZNK52SolverInterfaceTests_MatrixConversionEpetra_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x86)[0x55bcb49f4a56] [GlenDows:1480148] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7fdaa9e58ceb] [GlenDows:1480148] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7fdaa9e5ec63] [GlenDows:1480148] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7fdaa9e60b03] [GlenDows:1480148] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7fdaa9e616e7] [GlenDows:1480148] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/SolverInterfaceUnitTests(main+0x4f)[0x55bcb49e6fef] [GlenDows:1480148] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fdaa950fd90] [GlenDows:1480148] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fdaa950fe40] [GlenDows:1480148] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/SolverInterfaceUnitTests(_start+0x25)[0x55bcb49e70e5] [GlenDows:1480148] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
23/31 Testing: runAugLagStressCriterionUnitTests 23/31 Test: runAugLagStressCriterionUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/AugLagStressCriterionUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runAugLagStressCriterionUnitTests" start time: Dec 21 04:38 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.6e-06)
Running unit tests ...
- PlatoAnalyzeUnitTests_AugLagDataMng_ParseDefaults_UnitTest ... [Passed] (0.00026 sec)
- PlatoAnalyzeUnitTests_AugLagDataMng_ParseInputs_UnitTest ... [Passed] (7.74e-05 sec)
- PlatoAnalyzeUnitTests_AugLagDataMng_AllocateContainers_UnitTest ... [Passed] (0.000117 sec)
- PlatoAnalyzeUnitTests_AugLagDataMng_Initialize_UnitTest ... [Passed] (5.62e-05 sec)
- PlatoAnalyzeUnitTests_AugLagDataMng_UpdateLagrangeMultipliers_UnitTest ... [Passed] (2.73e-05 sec)
- PlatoAnalyzeUnitTests_AugLagDataMng_UpdatePenaltyValues_1_UnitTest ... [Passed] (2.54e-05 sec)
- PlatoAnalyzeUnitTests_AugLagDataMng_UpdatePenaltyValues_2_UnitTest ... [Passed] (2.43e-05 sec) [GlenDows:1480155] *** Process received signal *** [GlenDows:1480155] Signal: Floating point exception (8) [GlenDows:1480155] Signal code: Invalid floating point operation (7) [GlenDows:1480155] Failing at address: 0x7fa6c3fb2c48 [GlenDows:1480155] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fa6ca232520] [GlenDows:1480155] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7fa6c3fb2c48] [GlenDows:1480155] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7fa6c3f3288a] [GlenDows:1480155] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7fa6c3fd2e53] [GlenDows:1480155] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7fa6c3ccaab3] [GlenDows:1480155] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7fa6c3d87c15] [GlenDows:1480155] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7fa6c4196303] [GlenDows:1480155] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7fa6c419f879] [GlenDows:1480155] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7fa6c4140628] [GlenDows:1480155] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7fa6c4143c14] [GlenDows:1480155] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7fa6c4143e99] [GlenDows:1480155] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7fa6c86ebcf3] [GlenDows:1480155] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7fa6ca1d464f] [GlenDows:1480155] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7fa6ca1e3895] [GlenDows:1480155] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7fa6d3f93d82] [GlenDows:1480155] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7fa6d3f94255] [GlenDows:1480155] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/AugLagStressCriterionUnitTests(_ZNK25AugLagStressCriterionTest78PlatoAnalyzeUnitTests_StrengthConstraintCriterion_Evaluate_VonMises2D_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x98)[0x55770e659af8] [GlenDows:1480155] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7fa6cab62ceb] [GlenDows:1480155] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7fa6cab68c63] [GlenDows:1480155] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7fa6cab6ab03] [GlenDows:1480155] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7fa6cab6b6e7] [GlenDows:1480155] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/AugLagStressCriterionUnitTests(main+0x4f)[0x55770e650e0f] [GlenDows:1480155] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fa6ca219d90] [GlenDows:1480155] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fa6ca219e40] [GlenDows:1480155] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/AugLagStressCriterionUnitTests(_start+0x25)[0x55770e650f05] [GlenDows:1480155] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
24/31 Testing: runMultipointConstraintUnitTests 24/31 Test: runMultipointConstraintUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/MultipointConstraintUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runMultipointConstraintUnitTests" start time: Dec 21 04:38 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.1e-06)
Running unit tests ...
[GlenDows:1480162] *** Process received signal *** [GlenDows:1480162] Signal: Floating point exception (8) [GlenDows:1480162] Signal code: Invalid floating point operation (7) [GlenDows:1480162] Failing at address: 0x7f992e1d5c48 [GlenDows:1480162] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f99343c6520] [GlenDows:1480162] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7f992e1d5c48] [GlenDows:1480162] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7f992e15588a] [GlenDows:1480162] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7f992e1f5e53] [GlenDows:1480162] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7f992deedab3] [GlenDows:1480162] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7f992dfaac15] [GlenDows:1480162] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7f992e3b9303] [GlenDows:1480162] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7f992e3c2879] [GlenDows:1480162] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7f992e363628] [GlenDows:1480162] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7f992e366c14] [GlenDows:1480162] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7f992e366e99] [GlenDows:1480162] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7f993287fcf3] [GlenDows:1480162] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7f993436864f] [GlenDows:1480162] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7f9934377895] [GlenDows:1480162] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7f993e1b6d82] [GlenDows:1480162] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7f993e1b7255] [GlenDows:1480162] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/MultipointConstraintUnitTests(_ZNK55MultipointConstraintTests_BuildCondensedSystem_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0xc5)[0x5622075588d5] [GlenDows:1480162] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7f9934cf6ceb] [GlenDows:1480162] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7f9934cfcc63] [GlenDows:1480162] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7f9934cfeb03] [GlenDows:1480162] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7f9934cff6e7] [GlenDows:1480162] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/MultipointConstraintUnitTests(main+0x4f)[0x562207554daf] [GlenDows:1480162] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f99343add90] [GlenDows:1480162] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f99343ade40] [GlenDows:1480162] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/MultipointConstraintUnitTests(_start+0x25)[0x562207554ea5] [GlenDows:1480162] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
25/31 Testing: runVolumeAverageCriterionUnitTests 25/31 Test: runVolumeAverageCriterionUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/VolumeAverageCriterionUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runVolumeAverageCriterionUnitTests" start time: Dec 21 04:38 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 1.9e-06)
Running unit tests ...
- VolumeAverageCriterionTests_VolumeAverageVonMisesStressAxial_3D_UnitTest ... TachoSolver: Analyze ==================== Linear system A number of equations: 24
A is a small problem ( < 1024 ) and LAPACK is used
Time time for copying A into supernodes: 0.009402 s time for numeric factorization: 0.000057 s total time spent: 0.009459 s
Time time for extra work e.g.,copy rhs: 0.000004 s time for numeric solve: 0.000041 s total time spent: 0.000045 s
Cycle: 1.000000e+00 Increment: 1.000000e+00 N-R Itr: 0 Increment norm: 4.156922e-01 Residual norm: 8.281734e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 1.000000e+00 N-R Itr: 1 Increment norm: 4.156922e-01 Residual norm: 1.027742e-13
Time time for copying A into supernodes: 0.000006 s time for numeric factorization: 0.000007 s total time spent: 0.000012 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000003 s
[Passed] (0.0165 sec)
- VolumeAverageCriterionTests_VolumeAverageVonMisesStressShear_3D_UnitTest ... TachoSolver: Analyze ==================== Linear system A number of equations: 24
A is a small problem ( < 1024 ) and LAPACK is used
Time time for copying A into supernodes: 0.000006 s time for numeric factorization: 0.000007 s total time spent: 0.000013 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 1.000000e+00 N-R Itr: 0 Increment norm: 5.656854e-01 Residual norm: 5.656854e-01
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 1.000000e+00 N-R Itr: 1 Increment norm: 5.656854e-01 Residual norm: 2.034924e-14
Time time for copying A into supernodes: 0.000005 s time for numeric factorization: 0.000006 s total time spent: 0.000011 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
[Passed] (0.00466 sec) 2. VolumeAverageCriterionTests_VolumeAverageVonMisesStressGradientZ_3D_UnitTest ... TachoSolver: Analyze
Linear system A number of equations: 72
A is a small problem ( < 1024 ) and LAPACK is used
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000025 s total time spent: 0.000033 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000006 s total time spent: 0.000007 s
Cycle: 1.000000e+00 Increment: 1.000000e+00 N-R Itr: 0 Increment norm: 3.001935e-01 Residual norm: 2.852723e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 1.000000e+00 N-R Itr: 1 Increment norm: 3.001935e-01 Residual norm: 1.791043e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000002 s time for numeric solve: 0.000005 s total time spent: 0.000006 s
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001470e-01 Residual norm: 2.918039e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001470e-01 Residual norm: 1.389128e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.002407e-01 Residual norm: 2.788399e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.002407e-01 Residual norm: 1.263299e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001013e-01 Residual norm: 2.984357e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001013e-01 Residual norm: 1.503171e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.002887e-01 Residual norm: 2.725061e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.002887e-01 Residual norm: 1.414334e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001888e-01 Residual norm: 2.859209e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001888e-01 Residual norm: 1.453878e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001982e-01 Residual norm: 2.846246e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001982e-01 Residual norm: 1.582146e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001841e-01 Residual norm: 2.865706e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001841e-01 Residual norm: 1.750037e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.002029e-01 Residual norm: 2.839779e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.002029e-01 Residual norm: 1.476866e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001930e-01 Residual norm: 2.853371e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001930e-01 Residual norm: 1.440481e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001940e-01 Residual norm: 2.852074e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001940e-01 Residual norm: 1.233912e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001926e-01 Residual norm: 2.854019e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001926e-01 Residual norm: 1.334933e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001944e-01 Residual norm: 2.851426e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001944e-01 Residual norm: 1.161781e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e-01 Residual norm: 2.852787e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e-01 Residual norm: 1.485107e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e-01 Residual norm: 2.852658e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e-01 Residual norm: 1.791145e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001934e-01 Residual norm: 2.852852e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001934e-01 Residual norm: 1.321787e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001936e-01 Residual norm: 2.852593e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001936e-01 Residual norm: 1.625812e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e-01 Residual norm: 2.852729e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e-01 Residual norm: 1.593980e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e-01 Residual norm: 2.852716e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e-01 Residual norm: 1.445433e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e-01 Residual norm: 2.852736e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e-01 Residual norm: 1.416178e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e-01 Residual norm: 2.852710e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e-01 Residual norm: 1.601997e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e-01 Residual norm: 2.852723e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e-01 Residual norm: 2.447367e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e-01 Residual norm: 2.852722e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e-01 Residual norm: 1.669120e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e-01 Residual norm: 2.852724e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e-01 Residual norm: 1.499559e-13
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e-01 Residual norm: 2.852721e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e-01 Residual norm: 1.770520e-13
Step Size Grad'*Step FD Approx abs(Error) 1.00000000e-01 8.76490047e+00 8.76490047e+00 3.67350594e-12 1.00000000e-02 8.76490047e+00 8.76490047e+00 1.72128978e-12 1.00000000e-03 8.76490047e+00 8.76490047e+00 1.44506629e-11 1.00000000e-04 8.76490047e+00 8.76490047e+00 9.03543906e-11 1.00000000e-05 8.76490047e+00 8.76490047e+00 1.27151800e-09 1.00000000e-06 8.76490047e+00 8.76490047e+00 3.99526634e-09 TachoSolver: Release
[Passed] (0.0229 sec) 3. VolumeAverageCriterionTests_VolumeAverageTensileEnergyAxial_3D_UnitTest ... TachoSolver: Analyze
Linear system A number of equations: 24
A is a small problem ( < 1024 ) and LAPACK is used
Time time for copying A into supernodes: 0.000005 s time for numeric factorization: 0.000007 s total time spent: 0.000012 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 1.000000e+00 N-R Itr: 0 Increment norm: 4.156922e-01 Residual norm: 8.281734e+02
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 1.000000e+00 N-R Itr: 1 Increment norm: 4.156922e-01 Residual norm: 1.027742e-13
Time time for copying A into supernodes: 0.000006 s time for numeric factorization: 0.000006 s total time spent: 0.000012 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
[Passed] (0.0045 sec) 4. VolumeAverageCriterionTests_VolumeAverageTensileEnergyShear_3D_UnitTest ... TachoSolver: Analyze
Linear system A number of equations: 24
A is a small problem ( < 1024 ) and LAPACK is used
Time time for copying A into supernodes: 0.000005 s time for numeric factorization: 0.000007 s total time spent: 0.000012 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000003 s
Cycle: 1.000000e+00 Increment: 1.000000e+00 N-R Itr: 0 Increment norm: 5.656854e-01 Residual norm: 5.656854e-01
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 1.000000e+00 N-R Itr: 1 Increment norm: 5.656854e-01 Residual norm: 2.034924e-14
Time time for copying A into supernodes: 0.000006 s time for numeric factorization: 0.000006 s total time spent: 0.000012 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
[Passed] (0.00448 sec) 5. VolumeAverageCriterionTests_VolumeAverageTensileEnergyGradientZ_3D_UnitTest ... TachoSolver: Analyze
Linear system A number of equations: 72
A is a small problem ( < 1024 ) and LAPACK is used
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000005 s total time spent: 0.000007 s
Cycle: 1.000000e+00 Increment: 1.000000e+00 N-R Itr: 0 Increment norm: 3.001935e+00 Residual norm: 2.852723e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 1.000000e+00 N-R Itr: 1 Increment norm: 3.001935e+00 Residual norm: 1.472785e-12
Time time for copying A into supernodes: 0.000009 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000002 s time for numeric solve: 0.000005 s total time spent: 0.000006 s
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001470e+00 Residual norm: 2.918039e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001470e+00 Residual norm: 1.363718e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.002407e+00 Residual norm: 2.788399e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.002407e+00 Residual norm: 1.522592e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001013e+00 Residual norm: 2.984357e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001013e+00 Residual norm: 1.861990e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.002887e+00 Residual norm: 2.725061e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.002887e+00 Residual norm: 1.365730e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001888e+00 Residual norm: 2.859209e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001888e+00 Residual norm: 1.689674e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001982e+00 Residual norm: 2.846246e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001982e+00 Residual norm: 1.342701e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001841e+00 Residual norm: 2.865706e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001841e+00 Residual norm: 1.325497e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.002029e+00 Residual norm: 2.839779e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.002029e+00 Residual norm: 1.368528e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001930e+00 Residual norm: 2.853371e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001930e+00 Residual norm: 1.377097e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001940e+00 Residual norm: 2.852074e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001940e+00 Residual norm: 1.322539e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001926e+00 Residual norm: 2.854019e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001926e+00 Residual norm: 1.860810e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001944e+00 Residual norm: 2.851426e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001944e+00 Residual norm: 1.635734e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e+00 Residual norm: 2.852787e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e+00 Residual norm: 1.653943e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e+00 Residual norm: 2.852658e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e+00 Residual norm: 1.192702e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000005 s total time spent: 0.000006 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001934e+00 Residual norm: 2.852852e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001934e+00 Residual norm: 1.226546e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000002 s time for numeric solve: 0.000004 s total time spent: 0.000006 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001936e+00 Residual norm: 2.852593e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001936e+00 Residual norm: 1.762207e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000032 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e+00 Residual norm: 2.852729e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e+00 Residual norm: 1.504779e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000006 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e+00 Residual norm: 2.852716e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e+00 Residual norm: 1.981563e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e+00 Residual norm: 2.852736e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e+00 Residual norm: 1.468886e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e+00 Residual norm: 2.852710e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e+00 Residual norm: 2.027662e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000003 s total time spent: 0.000004 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e+00 Residual norm: 2.852723e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e+00 Residual norm: 2.064071e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e+00 Residual norm: 2.852722e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e+00 Residual norm: 1.323833e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000024 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e+00 Residual norm: 2.852724e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e+00 Residual norm: 1.663908e-12
Time time for copying A into supernodes: 0.000008 s time for numeric factorization: 0.000023 s total time spent: 0.000031 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000004 s total time spent: 0.000005 s
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 0 Increment norm: 3.001935e+00 Residual norm: 2.852721e+03
*** Newton-Raphson Solver Report: Residual norm tolerance satisfied ***
Cycle: 1.000000e+00 Increment: 0.000000e+00 N-R Itr: 1 Increment norm: 3.001935e+00 Residual norm: 1.706126e-12
Step Size Grad'*Step FD Approx abs(Error) 1.00000000e-01 2.24863477e+00 2.24863477e+00 8.12683254e-13 1.00000000e-02 2.24863477e+00 2.24863477e+00 6.67021993e-13 1.00000000e-03 2.24863477e+00 2.24863477e+00 9.96136507e-12 1.00000000e-04 2.24863477e+00 2.24863477e+00 1.01505027e-10 1.00000000e-05 2.24863477e+00 2.24863477e+00 9.53946699e-10 1.00000000e-06 2.24863477e+00 2.24863480e+00 2.90943998e-08 TachoSolver: Release
[Passed] (0.0229 sec)
Total Time: 0.0761 sec
Summary: total = 6, run = 6, passed = 6, failed = 0
Test Passed. "runVolumeAverageCriterionUnitTests" end time: Dec 21 04:38 MST "runVolumeAverageCriterionUnitTests" time elapsed: 00:00:00
26/31 Testing: runElastostaticTotalLagrangianUnitTests 26/31 Test: runElastostaticTotalLagrangianUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElastostaticTotalLagrangianUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runElastostaticTotalLagrangianUnitTests" start time: Dec 21 04:38 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.9e-06)
Running unit tests ...
- ElastostaticTotalLagrangianTests_ComputeDeviatoricStressTensor_UnitTest ... [Passed] (5.06e-05 sec)
- ElastostaticTotalLagrangianTests_ApplyCauchyStressTransformation_UnitTest ... [Passed] (2e-05 sec) [GlenDows:1480176] *** Process received signal *** [GlenDows:1480176] Signal: Floating point exception (8) [GlenDows:1480176] Signal code: Invalid floating point operation (7) [GlenDows:1480176] Failing at address: 0x7f3d363e8c48 [GlenDows:1480176] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f3d3b4b4520] [GlenDows:1480176] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7f3d363e8c48] [GlenDows:1480176] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7f3d3636888a] [GlenDows:1480176] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7f3d36408e53] [GlenDows:1480176] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7f3d36100ab3] [GlenDows:1480176] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7f3d361bdc15] [GlenDows:1480176] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7f3d365cc303] [GlenDows:1480176] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7f3d365d5879] [GlenDows:1480176] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7f3d36576628] [GlenDows:1480176] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7f3d36579c14] [GlenDows:1480176] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7f3d36579e99] [GlenDows:1480176] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7f3d3996dcf3] [GlenDows:1480176] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7f3d3b45664f] [GlenDows:1480176] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7f3d3b465895] [GlenDows:1480176] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7f3d44c19d82] [GlenDows:1480176] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7f3d44c1a255] [GlenDows:1480176] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElastostaticTotalLagrangianUnitTests(_ZNK32ElastostaticTotalLagrangianTests82ElastostaticTotalLagrangianTests_Nonlinear_LocalMeasureVonMises_PureShear_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x8b)[0x560b96e0759b] [GlenDows:1480176] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7f3d3bde4ceb] [GlenDows:1480176] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7f3d3bdeac63] [GlenDows:1480176] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7f3d3bdecb03] [GlenDows:1480176] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7f3d3bded6e7] [GlenDows:1480176] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElastostaticTotalLagrangianUnitTests(main+0x4f)[0x560b96df734f] [GlenDows:1480176] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f3d3b49bd90] [GlenDows:1480176] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f3d3b49be40] [GlenDows:1480176] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ElastostaticTotalLagrangianUnitTests(_start+0x25)[0x560b96df7445] [GlenDows:1480176] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
27/31 Testing: runThermoelastostaticTotalLagrangianUnitTests 27/31 Test: runThermoelastostaticTotalLagrangianUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ThermoelastostaticTotalLagrangianUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runThermoelastostaticTotalLagrangianUnitTests" start time: Dec 21 04:38 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 3.2e-06)
Running unit tests ...
[GlenDows:1480183] *** Process received signal *** [GlenDows:1480183] Signal: Floating point exception (8) [GlenDows:1480183] Signal code: Invalid floating point operation (7) [GlenDows:1480183] Failing at address: 0x7fe58bea1c48 [GlenDows:1480183] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fe590f6d520] [GlenDows:1480183] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7fe58bea1c48] [GlenDows:1480183] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7fe58be2188a] [GlenDows:1480183] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7fe58bec1e53] [GlenDows:1480183] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7fe58bbb9ab3] [GlenDows:1480183] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7fe58bc76c15] [GlenDows:1480183] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7fe58c085303] [GlenDows:1480183] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7fe58c08e879] [GlenDows:1480183] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7fe58c02f628] [GlenDows:1480183] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7fe58c032c14] [GlenDows:1480183] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7fe58c032e99] [GlenDows:1480183] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7fe58f426cf3] [GlenDows:1480183] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7fe590f0f64f] [GlenDows:1480183] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7fe590f1e895] [GlenDows:1480183] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7fe59a6d2d82] [GlenDows:1480183] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7fe59a6d3255] [GlenDows:1480183] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ThermoelastostaticTotalLagrangianUnitTests(_ZNK38ThermoelastostaticTotalLagrangianTests92ElastostaticTotalLagrangianTests_Nonlinear_LocalMeasureThermoMechVonMises_PureShear_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x98)[0x5565116ddca8] [GlenDows:1480183] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7fe59189dceb] [GlenDows:1480183] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7fe5918a3c63] [GlenDows:1480183] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7fe5918a5b03] [GlenDows:1480183] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7fe5918a66e7] [GlenDows:1480183] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ThermoelastostaticTotalLagrangianUnitTests(main+0x4f)[0x5565116c0c4f] [GlenDows:1480183] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fe590f54d90] [GlenDows:1480183] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fe590f54e40] [GlenDows:1480183] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/ThermoelastostaticTotalLagrangianUnitTests(_start+0x25)[0x5565116c0d45] [GlenDows:1480183] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
28/31 Testing: runHelmholtzFilterUnitTests 28/31 Test: runHelmholtzFilterUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/HelmholtzFilterUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runHelmholtzFilterUnitTests" start time: Dec 21 04:38 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.4e-06)
Running unit tests ...
[GlenDows:1480190] *** Process received signal *** [GlenDows:1480190] Signal: Floating point exception (8) [GlenDows:1480190] Signal code: Invalid floating point operation (7) [GlenDows:1480190] Failing at address: 0x7fa16615ec48 [GlenDows:1480190] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fa16c3de520] [GlenDows:1480190] [ 1] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T__init_native_float_types+0xbc8)[0x7fa16615ec48] [GlenDows:1480190] [ 2] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5T_init+0x4a)[0x7fa1660de88a] [GlenDows:1480190] [ 3] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5VL_init_phase2+0x143)[0x7fa16617ee53] [GlenDows:1480190] [ 4] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5_init_library+0x2f3)[0x7fa165e76ab3] [GlenDows:1480190] [ 5] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/hdf5-1.14.3-k5asxjzko7gum2iipewobvqq5mt3pdnv/lib/libhdf5.so.310(H5Eset_auto2+0x105)[0x7fa165f33c15] [GlenDows:1480190] [ 6] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc4_hdf5_initialize+0x13)[0x7fa166342303] [GlenDows:1480190] [ 7] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_HDF5_initialize+0x39)[0x7fa16634b879] [GlenDows:1480190] [ 8] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc_initialize+0x68)[0x7fa1662ec628] [GlenDows:1480190] [ 9] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(NC_create+0xc4)[0x7fa1662efc14] [GlenDows:1480190] [10] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/netcdf-c-4.9.2-yxfpekj5aotmu5hushjgtwi2abakbglw/lib/libnetcdf.so.19(nc__create+0x19)[0x7fa1662efe99] [GlenDows:1480190] [11] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libexodus.so.14(ex_create_int+0x83)[0x7fa16a897cf3] [GlenDows:1480190] [12] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG9writeMeshERNS_8MeshDataERKNS_8MeshSpecE+0x7f)[0x7fa16c38064f] [GlenDows:1480190] [13] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/libBamGlib.so(_ZN4BamG8generateERKNS_8MeshSpecE+0x465)[0x7fa16c38f895] [GlenDows:1480190] [14] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers22get_box_mesh_with_specERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS8+0x122)[0x7fa17613fd82] [GlenDows:1480190] [15] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/util/libAnalyze_UnitTestUtils.so(ZN5Plato11TestHelpers12get_box_meshENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiS6+0x25)[0x7fa176140255] [GlenDows:1480190] [16] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/HelmholtzFilterUnitTests(_ZNK53HelmholtzFilterTests_LengthScaleKeywordError_UnitTest15runUnitTestImplERN7Teuchos18basic_FancyOStreamIcSt11char_traitsIcEEERb+0x73)[0x56137cd755c3] [GlenDows:1480190] [17] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZNK7Teuchos12UnitTestBase11runUnitTestERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x3b)[0x7fa16cd0eceb] [GlenDows:1480190] [18] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository15runUnitTestImplERKNS_12UnitTestBaseERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x73)[0x7fa16cd14c63] [GlenDows:1480190] [19] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository12runUnitTestsERNS_18basic_FancyOStreamIcSt11char_traitsIcEEE+0x1813)[0x7fa16cd16b03] [GlenDows:1480190] [20] /home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/trilinos-14.0.0-we5onf6b77xbkafv53qqhjdicn77qw5o/lib/libteuchoscore.so.14(_ZN7Teuchos18UnitTestRepository20runUnitTestsFromMainEiPPc+0x77)[0x7fa16cd176e7] [GlenDows:1480190] [21] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/HelmholtzFilterUnitTests(main+0x4f)[0x56137cd6cbef] [GlenDows:1480190] [22] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fa16c3c5d90] [GlenDows:1480190] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fa16c3c5e40] [GlenDows:1480190] [24] /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/HelmholtzFilterUnitTests(_start+0x25)[0x56137cd6cce5] [GlenDows:1480190] *** End of error message ***
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 0 with PID 0 on node GlenDows exited on signal 8 (Floating point exception).
29/31 Testing: runTachoSolverUnitTests 29/31 Test: runTachoSolverUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/TachoSolverUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runTachoSolverUnitTests" start time: Dec 21 04:38 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 1e-06)
Running unit tests ...
- tachoSolver_Test1_UnitTest ... number of rows = 4 testing double type (symmetric matrix)------------------ TachoSolver: Analyze ==================== Linear system A number of equations: 4
A is a small problem ( < 1024 ) and LAPACK is used
Time time for copying A into supernodes: 0.000016 s time for numeric factorization: 0.000187 s total time spent: 0.000202 s
Time time for extra work e.g.,copy rhs: 0.000005 s time for numeric solve: 0.000073 s total time spent: 0.000078 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000001 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000001 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000001 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000001 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000001 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
tacho:: solve time (10) = 0.0003929 tacho:: relative error = 7.00135e-16 tacho PASS TachoSolver: Factorize Cholesky
Time time for copying A into supernodes: 0.000005 s time for numeric factorization: 0.000002 s total time spent: 0.000007 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000000 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000000 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000001 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
tacho:: solve time (10) = 0.0004449 tacho:: relative error = 4.76369e-16 tacho PASS TachoSolver: Release
Linear system A number of equations: 4
A is a small problem ( < 1024 ) and LAPACK is used
Time time for copying A into supernodes: 0.000002 s time for numeric factorization: 0.000169 s total time spent: 0.000171 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000002 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000001 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000002 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000002 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000002 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000002 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000001 s total time spent: 0.000001 s
tacho:: solve time (10) = 0.0006901 tacho:: relative error = 1.59389e-16 tacho PASS TachoSolver: Factorize SymLU
Time time for copying A into supernodes: 0.000002 s time for numeric factorization: 0.000008 s total time spent: 0.000010 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000002 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000001 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000002 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000001 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000001 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000000 s time for numeric solve: 0.000001 s total time spent: 0.000001 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000002 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000002 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000003 s
Time time for extra work e.g.,copy rhs: 0.000001 s time for numeric solve: 0.000002 s total time spent: 0.000002 s
tacho:: solve time (10) = 0.0003728 tacho:: relative error = 3.2392e-16 tacho PASS TachoSolver: Release
[Passed] (0.00301 sec)
Total Time: 0.00315 sec
Summary: total = 1, run = 1, passed = 1, failed = 0
Test Passed. "runTachoSolverUnitTests" end time: Dec 21 04:38 MST "runTachoSolverUnitTests" time elapsed: 00:00:00
30/31 Testing: runMeshMapUnitTests 30/31 Test: runMeshMapUnitTests Command: "/home/hansen/Codes/Morphorm/spack/opt/spack/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.3-aa3t5r5azmwb7zf4xvujaa652szxnqnm/bin/mpirun" "-npernode" "1" "-n" "1" "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/MeshMapUnitTests" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests "runMeshMapUnitTests" start time: Dec 21 04:38 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 2.9e-06)
Running unit tests ...
- PlatoTestMeshMap_GetBasis_Tet4_UnitTest ... [Passed] (0.0109 sec)
- PlatoTestMeshMap_GetBasis_Tet10_UnitTest ... [Passed] (0.0111 sec)
- PlatoTestMeshMap_GetBasis_Hex8_UnitTest ... [Passed] (0.00315 sec)
- PlatoTestMeshMap_GetBasis_Quad4_UnitTest ... [Passed] (0.00168 sec)
- PlatoTestMeshMap_GetBasis_Hex27_UnitTest ... [Passed] (0.00678 sec)
- PlatoTestMeshMap_SymmetryPlane_UnitTest ... [Passed] (6.27e-05 sec)
- PlatoTestMeshMap_Translation_UnitTest ... [Passed] (3.23e-05 sec)
- PlatoTestMeshMap_SymmetryMeshMap_Tet10_UnitTest ... [Passed] (0.00426 sec)
- PlatoTestMeshMap_SymmetryMeshMap_UnitTest ... [Passed] (0.00456 sec)
- PlatoTestMeshMap_SymmetryMeshMap_Hex8_UnitTest ... [Passed] (0.00443 sec)
- PlatoTestMeshMap_SymmetryMeshMap_Quad4_UnitTest ...
FILE: /home/hansen/Codes/Morphorm/analyze/src/Plato_MeshMap.hpp FUNCTION: void Plato::Geometry::MeshMap::setMatrixValues(Plato::Mesh, Plato::Geometry::MeshMap::IntegerArrayT, Plato::Geometry::MeshMap::VectorArrayT, Plato::Geometry::MeshMap::SparseMatrix&) [with ElementT = Plato::Quad4; ScalarT = double; Plato::Mesh = std::shared_ptrPlato::EngineMesh; Plato::Geometry::MeshMap::IntegerArrayT = Kokkos::View<int*, Kokkos::HostSpace>; Plato::Geometry::MeshMap::VectorArrayT = Kokkos::View<double**, Kokkos::LayoutRight, Kokkos::HostSpace>] LINE:269 MESSAGE: WARNING: NO PARENT ELEMENT COULD BE FOUND FOR AT LEAST ONE MAPPED NODE IN MESH MAP. TRY INCREASING SEARCH TOLERANCE
Check: rel_err(2*ry-tInField_host(i), tOutField_host(i)) = rel_err(0.8, 0.8) = 0 <= tol = 1e-12 : passed
Check: rel_err(2*ry-tInField_host(i), tOutField_host(i)) = rel_err(0.6, 0) = 1 <= tol = 1e-12 : FAILED
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(0.6, 0.6) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(0.8, 0.8) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(2*ry-tInField_host(i), tOutField_host(i)) = rel_err(0.8, 0) = 1 <= tol = 1e-12 : FAILED
Check: rel_err(2*ry-tInField_host(i), tOutField_host(i)) = rel_err(0.6, 0) = 1 <= tol = 1e-12 : FAILED
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(0.6, 0.6) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(0.8, 0.8) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(2*ry-tInField_host(i), tOutField_host(i)) = rel_err(0.8, 0.8) = 0 <= tol = 1e-12 : passed
Check: rel_err(2*ry-tInField_host(i), tOutField_host(i)) = rel_err(0.6, 0.6) = 1.85037e-16 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(0.6, 0.6) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(0.8, 0.8) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(2*ry-tInField_host(i), tOutField_host(i)) = rel_err(0.8, 0.8) = 2.77556e-16 <= tol = 1e-12 : passed
Check: rel_err(2*ry-tInField_host(i), tOutField_host(i)) = rel_err(0.6, 0.6) = 1.85037e-16 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(0.6, 0.6) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(0.8, 0.8) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(2*ry-tInField_host(i), tOutField_host(i)) = rel_err(0.8, 0) = 1 <= tol = 1e-12 : FAILED
Check: rel_err(2*ry-tInField_host(i), tOutField_host(i)) = rel_err(0.6, 0.6) = 1.85037e-16 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(0.6, 0.6) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(0.8, 0.8) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(2*ry-tInField_host(i), tOutField_host(i)) = rel_err(0.8, 0.8) = 0 <= tol = 1e-12 : passed
Check: rel_err(2*ry-tInField_host(i), tOutField_host(i)) = rel_err(0.6, 0.6) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(0.6, 0.6) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(0.8, 0.8) = 0 <= tol = 1e-12 : passed
Check: rel_err(tInField_host(i), tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed [FAILED] (0.00177 sec) PlatoTestMeshMap_SymmetryMeshMap_Quad4_UnitTest Location: /home/hansen/Codes/Morphorm/analyze/unit_tests/PlatoMeshMapTests.cpp:949
- PlatoTestMeshMap_SymmetryMeshMapWFilter_UnitTest ... [Passed] (0.00447 sec)
- PlatoTestMeshMap_SymmetryMeshMapWFilter_Hex8_UnitTest ... [Passed] (0.00463 sec)
- PlatoTestMeshMap_SymmetryMeshMapWFilter_Quad4_UnitTest ...
FILE: /home/hansen/Codes/Morphorm/analyze/src/Plato_MeshMap.hpp FUNCTION: void Plato::Geometry::MeshMap::setMatrixValues(Plato::Mesh, Plato::Geometry::MeshMap::IntegerArrayT, Plato::Geometry::MeshMap::VectorArrayT, Plato::Geometry::MeshMap::SparseMatrix&) [with ElementT = Plato::Quad4; ScalarT = double; Plato::Mesh = std::shared_ptrPlato::EngineMesh; Plato::Geometry::MeshMap::IntegerArrayT = Kokkos::View<int*, Kokkos::HostSpace>; Plato::Geometry::MeshMap::VectorArrayT = Kokkos::View<double**, Kokkos::LayoutRight, Kokkos::HostSpace>] LINE:269 MESSAGE: WARNING: NO PARENT ELEMENT COULD BE FOUND FOR AT LEAST ONE MAPPED NODE IN MESH MAP. TRY INCREASING SEARCH TOLERANCE
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 1.11022e-16 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 1.11022e-16 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 3.33067e-16 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 1.11022e-16 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 2.22045e-16 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 1.11022e-16 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 0) = 1 <= tol = 1e-12 : FAILED
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 1.11022e-16 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 2.22045e-16 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 2.22045e-16 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 1.11022e-16 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 1.11022e-16 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 1.11022e-16 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed
Check: rel_err(1.0, tOutField_host(i)) = rel_err(1, 1) = 0 <= tol = 1e-12 : passed [FAILED] (0.0019 sec) PlatoTestMeshMap_SymmetryMeshMapWFilter_Quad4_UnitTest Location: /home/hansen/Codes/Morphorm/analyze/unit_tests/PlatoMeshMapTests.cpp:1237
- PlatoTestMeshMap_SymmetryMeshMapWFilter_Tet4_UnitTest ... [Passed] (0.00446 sec)
- PlatoTestMeshMap_TransposeMatrix_UnitTest ... [Passed] (0.233 sec)
- PlatoTestMeshMap_TransposeMatrix_Tet10_UnitTest ... [Passed] (8.88 sec)
The following tests FAILED: 10. PlatoTestMeshMap_SymmetryMeshMap_Quad4_UnitTest ... 13. PlatoTestMeshMap_SymmetryMeshMapWFilter_Quad4_UnitTest ...
Total Time: 9.18 sec
Summary: total = 17, run = 17, passed = 15, failed = 2
Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted.
mpirun detected that one or more processes exited with non-zero status, thus causing the job to be terminated. The first process to do so was:
Test time = 11.35 sec ---------------------------------------------------------- Test Failed. "runMeshMapUnitTests" end time: Dec 21 04:38 MST "runMeshMapUnitTests" time elapsed: 00:00:11 ----------------------------------------------------------31/31 Testing: BamG_UnitTester 31/31 Test: BamG_UnitTester Command: "/home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/unittest/BamG_UnitTester" Directory: /home/hansen/Codes/Morphorm/analyze/spack-build-ikvodny/unit_tests/BamG/unittest "BamG_UnitTester" start time: Dec 21 04:38 MST Output:
*** Unit test suite ...
Sorting tests by group name then by the order they were added ... (time = 4e-06)
Running unit tests ...
- PlatoTestBamG_matches_UnitTest ... [Passed] (8e-06 sec)
- PlatoTestBamG_isSame_UnitTest ... [Passed] (6e-06 sec)
- PlatoTestBamG_indexMap_Hex8_UnitTest ... [Passed] (3e-06 sec)
- PlatoTestBamG_generateCoords_Hex8_UnitTest ... [Passed] (7e-06 sec)
- PlatoTestBamG_generateCoords_Tet4_UnitTest ... [Passed] (2e-06 sec)
- PlatoTestBamG_generateCoords_Quad4_UnitTest ... [Passed] (2e-06 sec)
- PlatoTestBamG_generateCoords_Tri3_UnitTest ... [Passed] (2e-06 sec)
- PlatoTestBamG_generateCoords_Tri3_2x2_UnitTest ... [Passed] (2e-06 sec)
- PlatoTestBamG_generateCoords_Bar2_UnitTest ... [Passed] (2e-06 sec)
- PlatoTestBamG_generateConnectivity_Hex8_UnitTest ... [Passed] (2e-06 sec)
- PlatoTestBamG_generateConnectivity_Tet4_UnitTest ... [Passed] (5e-06 sec)
- PlatoTestBamG_generateConnectivity_Quad4_UnitTest ... [Passed] (2e-06 sec)
- PlatoTestBamG_generateConnectivity_Tri3_UnitTest ... [Passed] (2e-06 sec)
- PlatoTestBamG_generateConnectivity_Tri3_2x2_UnitTest ... [Passed] (2e-06 sec)
- PlatoTestBamG_generateConnectivity_Bar2_UnitTest ... [Passed] (1e-06 sec)
- PlatoTestBamG_getNumNPE_UnitTest ... [Passed] (6e-06 sec)
- PlatoTestBamG_generateNodeSets_Hex8_Tet4_UnitTest ... [Passed] (6e-05 sec)
- PlatoTestBamG_generateNodeSets_Quad4_Tri3_UnitTest ... [Passed] (1.7e-05 sec)
- PlatoTestBamG_generateNodeSets_Quad4_Tri3_2x2_UnitTest ... [Passed] (1.4e-05 sec)
- PlatoTestBamG_generateNodeSets_Bar2_UnitTest ... [Passed] (3e-06 sec)
- PlatoTestBamG_generateSideSets_Hex8_UnitTest ... [Passed] (2e-05 sec)
- PlatoTestBamG_generateSideSets_Quad4_UnitTest ... [Passed] (8e-06 sec)
- PlatoTestBamG_generateSideSets_Tet4_UnitTest ... [Passed] (2.1e-05 sec)
- PlatoTestBamG_generateSideSets_Tri3_UnitTest ... [Passed] (1e-05 sec)
- PlatoTestBamG_generateSideSets_Tri3_2x2_UnitTest ... [Passed] (1e-05 sec)
Total Time: 0.000349 sec
Summary: total = 25, run = 25, passed = 25, failed = 0
End testing: Dec 21 04:38 MST