Description - mjsull/HapFlow GitHub Wiki

HapFlow is an application for visualizing hapolotypes present in reads. It is written in python and uses the Tkinter windows system. It is divided into 2 parts.

HapFlow-generator creates a profile of variants present in each read. If the variant profile is unique, a flow (profile of variants in a read) is created. If the flow already exists in another read, the count of the flow is incremented by one.

HapFlow-viewer displays the created flow file on the canvas of the GUI.