Intermediary files - microDM/MicFunPred GitHub Wiki

File with description

MicFunPred creates several intermediate files which can be used by user in downstram analysis. This files will be further used to predict metagenomes.

File	Description
out.blast	BLAST results of alignment of mapping OTU/ASV sequence against cutomized 16S rRNA gene sequence database
tax_abund.table	Abundance table consolidated at genus level. OTU/ASV ids are replaced with genus and all abundance values are consolidated.
predicted_16S_copy_numbers.txt	Predicted 16S rRNA gene copy numbers for each genera
tax_abund_normalized.table	Abundance table normalized with respect to 16S rRNA gene copy numbers
predicted_CAZymes.tsv.gz	Predicted CAZyme copy numbers for each genera
predicted_COG.tsv.gz	Predicted COG copy numbers for each genera
predicted_EC.tsv.gz	Predicted EC copy numbers for each genera
predicted_KO.tsv.gz	Predicted KO copy numbers for each genera
predicted_Pfam.tsv.gz	Predicted Pfam copy numbers for each genera
predicted_TIGRFAM.tsv.gz	Predicted TIGRFAM copy numbers for each genera