COG metagenome - microDM/MicFunPred GitHub Wiki
COG metagenome
This directory will contain predicted metagenome in terms of COG.
| File | Description |
|---|---|
| COG_metagenome.tsv.gz | Tab separated, COG metagenome, each column represents samples while rows represents COG |
| COG_metagenome_with_description.tsv.gz | COG metagenome along with annotations, names and description |
COG_metagenome.tsv.gz
zcat COG_metagenome.tsv.gz | head
sample1 sample2 sample3
COG0001 25.0 91.0 83.0
COG0005 12.0 0.0 83.0
COG0006 66.0 484.0 176.0
COG0008 60.0 278.0 239.0
COG0009 47.0 231.0 117.0
COG0010 28.0 219.0 38.0
COG0012 32.0 135.0 117.0
COG0013 32.0 163.0 118.0
COG0015 27.0 139.0 117.0
COG_metagenome_with_description.tsv.gz
zcat COG_metagenome_with_description.tsv.gz | head
sample1 sample2 sample3 func name
COG0001 25.0 91.0 83.0 H Glutamate-1-semialdehyde aminotransferase
COG0005 12.0 0.0 83.0 F Purine nucleoside phosphorylase
COG0006 66.0 484.0 176.0 E Xaa-Pro aminopeptidase
COG0008 60.0 278.0 239.0 J Glutamyl- or glutaminyl-tRNA synthetase
COG0009 47.0 231.0 117.0 J tRNA A37 threonylcarbamoyladenosine synthetase subunit TsaC/SUA5/YrdC
COG0010 28.0 219.0 38.0 E Arginase family enzyme
COG0012 32.0 135.0 117.0 J Ribosome-binding ATPase YchF, GTP1/OBG family
COG0013 32.0 163.0 118.0 J Alanyl-tRNA synthetase
COG0015 27.0 139.0 117.0 F Adenylosuccinate lyase