Database update history - meso-cacase/CRISPRdirect GitHub Wiki

[2021-10-20] Database added

  • Paroedura picta genome, Ppicta_v2.0 (Sep, 2021)
  • Xenopus laevis genome, XenBase/NCBI 9.2
  • Xenopus tropicalis genome, XenBase/UCB 10.0

[2020-11-07] Database added

  • Mouse genome, GRCm39/mm39 (Jun, 2020)
  • Aspergillus luchuensis str. RIB 2604 genome, AspL_2604
  • Aspergillus kawachii genome, IFO 4308 (Nov, 2011)

[2020-11-02] Database added

  • Paroedura picta genome, Ppicta_assembly_v1 (Mar, 2018)

[2018-09-02] Database added

  • Aedes aegypti genome, AaegL5 (Jun, 2017)
  • Aedes albopictus genome, AaloF1 (Nov, 2015)
  • Kluyveromyces marxianus genome, KM1777_03 (Oct, 2014)
  • Komagataella phaffii CBS 7435 genome, PicPas_Mar2011 (Oct, 2016)
  • Glycine max genome, v2.0 (Nov, 2015)
  • Sorghum bicolor genome, NCBIv3 (Jun, 2017)

[2018-05-10] Database added

  • Zebrafish genome, GRCz11/danRer11 (May, 2017)
  • Zebrafish genome, GRCz10/danRer10 (Sep, 2014)

[2018-05-07] Database added

  • Zea mays genome, AGPv4 (Mar, 2016)
  • Cucurbita moschata (Rifu) genome, v1
  • Capsicum annuum (Zunla-1) genome, release 2.0
  • Capsicum annuum var. glabriusculum (Chiltepin) genome, release 2.0
  • Cucumis melo genome, v3.6.1 (Jul, 2017)
  • Solanum melongena genome, r2.5.1
  • Cucumis sativus (Gy14) genome, v1
  • Cucurbita pepo subsp. pepo (Zucchini) genome, v4.1
  • Citrullus lanatus subsp. vulgaris (Charleston Gray) genome, v1
  • Citrullus lanatus subsp. vulgaris (97103) genome, v1
  • Helianthus annuus genome, HanXRQr1.0 (Dec, 2015)
  • Coffea canephora genome, v1.0

[2017-11-30] Database added

[2017-11-08] Database added

  • Aspergillus oryzae (RIB40) genome, s01-m09-r03 (Oct, 2015)
  • Actinidia chinensis genome
  • Torulaspora delbrueckii genome, ASM24337v1 (Feb, 2015)
  • Athalia rosae genome, Aros_1.0 (Mar, 2013)
  • Marchantia polymorpha genome JGI 3.1

[2017-06-19] Database added

  • Citrus clementina genome, v1.0
  • Citrus sinensis genome, v1.1
  • Solanum lycopersicum genome, SL3.00 (Feb, 2017)
  • Solanum lycopersicum genome, SL2.40 (Jan, 2011)
  • Cucumis melo genome, v3.5.1 (Oct, 2013)
  • Cucumis sativus (PI183967) genome (Apr, 2013)
  • Cucumis sativus (Chinese long) genome, v2
  • Silkworm genome, SilkBase assembly (Jan, 2017)

[2017-06-09] Database added

  • Human Japanese Reference Genome, JRGv2 (Jun, 2017)

[2017-02-17] Database added

  • Brassica rapa genome, v1.5 (May, 2013)

[2017-01-23] Database added

  • Mouse genome, MSMv3
  • Mouse genome, JF1v2
  • Ramazzottius variornatus (YOKOZUNA-1) genome (Sep, 2016)
  • Phaeodactylum tricornutum genome, ASM15095v2 (Feb, 2010)
  • Thalassiosira pseudonana genome, ASM14940v2 (May, 2014)
  • Ipomoea nil (Tokyo Kokei Standard; TKS) genome (Sep, 2016)
  • Malus domestica genome, v1.0p (Aug, 2012)
  • Fragaria vesca genome, v2.0.a1 (Dec, 2014)

[2016-09-09] Database added

  • Ichthyophthirius multifiliis macronuclear genome
  • Stylonychia lemnae macronuclear genome
  • Oxytricha trifallax macronuclear genome
  • Oxytricha trifallax micronuclear genome
  • Aspergillus nidulans (FGSC A4) genome, s10-m04-r06 (Apr, 2016)
  • Aspergillus fumigatus (Af293) genome, s03-m05-r06 (Apr, 2016)
  • Candida glabrata (CBS138) genome, s02-m07-r08 (Jun, 2016)
  • Candida albicans (SC5314) genome, Assembly 21, A21-s02-m09-r10 (Feb, 2016)
  • Penicillium marneffei (ATCC 18224) genome, JCVI-PMFA1-2.0 (Oct, 2008)
  • Coprinopsis cinerea (okayama7#130) genome, CC3 (Aug, 2014)

[2016-08-30] Database added

  • Human Japanese Reference Genome, JRGv1 (Aug, 2016)

[2016-06-14] Database added

  • Nicotiana tabacum (BX) genome, Ntab-BX (2014)
  • Debaryomyces hansenii (CBS767) genome, ASM644v2 (Feb, 2015)
  • Kluyveromyces lactis genome, ASM251v1 (Feb, 2015)
  • Yarrowia lipolytica genome, ASM252v1 (May, 2012)
  • Fusarium graminearum genome, RR (Nov, 2014)
  • Rhodotorula toruloides (NP11) genome, RHOziaDV1.0 (Apr, 2013)
  • Tetrahymena thermophila genome (Jun, 2014)
  • Tetrahymena borealis genome (Oct, 2012)
  • Tetrahymena elliotti genome (Oct, 2012)
  • Tetrahymena malaccensis genome (Oct, 2012)

[2016-03-30] Database added

  • Golden hamster genome, MesAur1.0 (Mar, 2013)

[2015-11-24] Database added

  • Magnaporthe oryzae (70-15) genome, MG8 (Sep, 2011)