PB Print trees - mendessoares/BuddySuite GitHub Wiki

--print_trees, -ptr

Description

Output an ascii representation of all each tree

Example

Input file: fir.nex

#NEXUS

BEGIN TAXA;
    DIMENSIONS NTAX=6;
    TAXLABELS
        firSA25b
        firSA24a
        firSA25a
        firSA26b
        firSA24b
        firSA26a
  ;
END;

BEGIN TREES;
    TREE fir1 = [&U] ((firSA25b:2.0,firSA24a:1.0),((firSA25a:1.0,(firSA26b:3.0,firSA24b:1.0)),firSA26a:1.0)):2.0;
END;

Usage example

$: pb fir.nex -ptr

Output

#### fir1 ####
                                                    /----------------- firSA25b
/---------------------------------------------------+                          
|                                                   \----------------- firSA24a
|                                                                              
+                                  /---------------------------------- firSA25a
|                /-----------------+                                           
|                |                 |                /----------------- firSA26b
\----------------+                 \----------------+                          
                 |                                  \----------------- firSA24b
                 |                                                             
                 \---------------------------------------------------- firSA26a