Installing JAMM - mahmoudibrahim/JAMM GitHub Wiki

JAMM Installation (since v1.0.6rev1)

Step 2. Make sure you are on a Linux system

Step 3. Make sure you have R (version 3 or later), awk and Perl installed

Step 4. Install the following R packages: signal - mclust (versions 4 or 5)

You are good to go. You just need to unzip the JAMM folder you donwloaded and you can run JAMM via:

bash /path/to/JAMM/folder/JAMM.sh

For more information on how to use JAMM, please check this page.

To install those older JAMM versions you will aslo need the sqldf R package in addition to the packages listed above.

We tested those versions with the following combination of R packages, so those should work:

R version 3.1.0: sqldf_0.4-10 RSQLite_1.0.0 DBI_0.3.1 gsubfn_0.6-6 proto_0.3-10 chron_2.3-45 tcltk_3.1.0
R version 3.0.1: sqldf_0.4-7.1 RSQLite_0.11.4 DBI_0.3.1 gsubfn_0.6-6 proto_0.3-10 chron_2.3-45 tcltk_3.0.1