Vocabulary consensus - linkedannotation/blah2015 GitHub Wiki

proteins

• [uniprot] http://identifiers.org/protein

Subcellular localizations / structures

• [GO-CC] http://identifiers.org/go

Organisms

• [NCBI Taxonomy] http://identifiers.org/taxonomy

drugs

• [RxNorm via UMLS] http://bio2rdf.org/umls:
• [Mesh] http://bio2rdf.org/mesh:
• [ChEBI] http://www.ebi.ac.uk/chebi/searchId.do?chebiId=23888 (ChEBI is more than drugs, this is just the drug subset)

Phenotypes

• [PhenoMiner??]
• [Mammalian Phenotype Ontology] http://www.informatics.jax.org/searches/MP_form.shtml
• [Human Phenotype Ontology] http://www.human-phenotype-ontology.org/

Anatomy

• [Uberon] http://uberon.github.io/