snakemake - k821209/pipelines GitHub Wiki

installation

wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh
bash Miniconda3-latest-Linux-x86_64.sh
conda install -c bioconda snakemake

pipeline visualization

snakemake --dag 2> /dev/null | dot -T svg > dag.svg