check_seg_proofread_status - jaybgager/tracertools GitHub Wiki

This function checks if a list of segment IDs have been marked as "proofread" or not in a datastack's official proofreading table.

Arguments:

• datastack (string, mandatory)
  • the name of the CAVE datastack the segment IDs are from (e.g. "brain_and_nerve_cord")
• seg_ids (list of integers, mandatory)
  • a list of segment IDs to check the proofreading status of

Returns:

• out_list (list of booleans)
  • a list of True/False values denoting proofreading status of each segment ID
  • True = marked as proofread

Example

INPUT:

import tracertools as tt

segments = [
    720575940379940739, # not proofread #
    720575941535667946, # not proofread #
    720575941539599858, # not proofread #
    720575940380068115, # not proofread #
    720575941609391725, # proofread #
    720575940380207581, # not proofread #
]

is_proofread = tt.check_seg_proofread_status(
    datastack = "brain_and_nerve_cord", 
    seg_ids = segments,
)

print(is_proofread)

OUTPUT:

[False, False, False, False, True, False]

[!NOTE] The proofreading status of the example segment IDs may have changed since the writing of this example if any of them have been edited. If this is the case, running the above code may give you output with more True results.