Home - igheyas/Bioinformatics GitHub Wiki

Welcome to the Bioinformatics wiki!

1. DNA, RNA, Protein Gene etc.
2. intro to Biostrings 2.1)Intro to Biostrings
3. MSA
4. Genome Assemble Concept
5. Genome Assemble Demo
6. Ref Genome Preparation and Indexing
7. Aligning Reads

8)BAM Processing with samtools

9)Coverage and Depth Analysis

10. Filtering and cleanup

11)IGV Visualization

12)Map Reading_Hand-on Exercise

13)Calling Variants

14)Basic VCF Operations

15)Variant Filtering Strategies

16)Annotation and Enrichment