x86_64 default singlecell notebook 2fe24267777c - huchlab/sequencing-docker-stacks GitHub Wiki
- Build timestamp: 2025-08-05T09:06:29Z
- Docker image:
quay.io/huchlab/singlecell-notebook:2fe24267777c - Docker image size: 9.86GB
- Git commit SHA: 2fe24267777c70313b57b8f287ce8cfcec68af1e
- Git commit message:
Revert "use github access token for devtools:install_github"
This reverts commit 7a075755569a9f876ed45bc838678a7326abd466.
Python 3.12.11
conda info:
active environment : None
user config file : /home/jovyan/.condarc
populated config files : /opt/conda/.condarc
/home/jovyan/.condarc
conda version : 25.5.1
conda-build version : not installed
python version : 3.12.11.final.0
solver : libmamba (default)
virtual packages : __archspec=1=zen2
__conda=25.5.1=0
__glibc=2.39=0
__linux=6.11.0=0
__unix=0=0
base environment : /opt/conda (writable)
conda av data dir : /opt/conda/etc/conda
conda av metadata url : None
channel URLs : https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
https://conda.anaconda.org/bioconda/linux-64
https://conda.anaconda.org/bioconda/noarch
package cache : /opt/conda/pkgs
/home/jovyan/.conda/pkgs
envs directories : /opt/conda/envs
/home/jovyan/.conda/envs
platform : linux-64
user-agent : conda/25.5.1 requests/2.32.4 CPython/3.12.11 Linux/6.11.0-1018-azure ubuntu/24.04.2 glibc/2.39 solver/libmamba conda-libmamba-solver/25.4.0 libmambapy/2.3.1
UID:GID : 1000:100
netrc file : None
offline mode : False
mamba info:
libmamba version : 2.3.1
mamba version : 2.3.1
curl version : libcurl/8.14.1 OpenSSL/3.5.1 zlib/1.3.1 zstd/1.5.7 libssh2/1.11.1 nghttp2/1.64.0
libarchive version : libarchive 3.8.1 zlib/1.3.1 liblzma/5.8.1 bz2lib/1.0.8 liblz4/1.10.0 libzstd/1.5.7 liblzo2/2.10 openssl/3.5.0 libb2/bundled
envs directories : /opt/conda/envs
package cache : /opt/conda/pkgs
/home/jovyan/.mamba/pkgs
environment : base
env location : /opt/conda
user config files : /home/jovyan/.mambarc
populated config files : /home/jovyan/.condarc
/opt/conda/.condarc
virtual packages : __unix=0=0
__linux=6.11.0=0
__glibc=2.39=0
__archspec=1=x86_64_v3
channels : https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
https://conda.anaconda.org/bioconda/linux-64
https://conda.anaconda.org/bioconda/noarch
base environment : /opt/conda
platform : linux-64
mamba list:
List of packages in environment: "/opt/conda"
Name Version Build Channel
────────────────────────────────────────────────────────────────────────────────────────────────
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 3_kmp_llvm conda-forge
_r-mutex 1.0.1 anacondar_1 conda-forge
_x86_64-microarch-level 3 2_x86_64_v3 conda-forge
absl-py 2.3.1 pyhd8ed1ab_0 conda-forge
adjusttext 1.3.0 pyhd8ed1ab_0 conda-forge
aiohappyeyeballs 2.6.1 pyhd8ed1ab_0 conda-forge
aiohttp 3.12.15 py312h8a5da7c_0 conda-forge
aiosignal 1.4.0 pyhd8ed1ab_0 conda-forge
alembic 1.16.4 pyhd8ed1ab_0 conda-forge
altair 5.5.0 pyhd8ed1ab_1 conda-forge
anndata 0.12.1 pyhd8ed1ab_0 conda-forge
anndata2ri 1.3.2 pyhdfd78af_0 bioconda
annotated-types 0.7.0 pyhd8ed1ab_1 conda-forge
anyio 4.9.0 pyh29332c3_0 conda-forge
aom 3.9.1 hac33072_0 conda-forge
arboreto 0.1.6 pyh3252c3a_0 bioconda
archspec 0.2.5 pyhd8ed1ab_0 conda-forge
argcomplete 3.6.2 pyhd8ed1ab_0 conda-forge
argon2-cffi 25.1.0 pyhd8ed1ab_0 conda-forge
argon2-cffi-bindings 25.1.0 py312h4c3975b_0 conda-forge
arpack 3.9.1 nompi_hf03ea27_102 conda-forge
array-api-compat 1.12.0 pyhe01879c_0 conda-forge
arrow 1.3.0 pyhd8ed1ab_1 conda-forge
asttokens 3.0.0 pyhd8ed1ab_1 conda-forge
async-lru 2.0.5 pyh29332c3_0 conda-forge
async_generator 1.10 pyhd8ed1ab_2 conda-forge
attr 2.5.1 h166bdaf_1 conda-forge
attrs 25.3.0 pyh71513ae_0 conda-forge
aws-c-auth 0.9.0 h92a005d_16 conda-forge
aws-c-cal 0.9.2 he7b75e1_1 conda-forge
aws-c-common 0.12.4 hb03c661_0 conda-forge
aws-c-compression 0.3.1 h92c474e_6 conda-forge
aws-c-event-stream 0.5.5 h0c2b49e_1 conda-forge
aws-c-http 0.10.2 hee85082_3 conda-forge
aws-c-io 0.21.0 h1d8da38_1 conda-forge
aws-c-mqtt 0.13.1 h46c1de9_4 conda-forge
aws-c-s3 0.8.3 h9cdc349_1 conda-forge
aws-c-sdkutils 0.2.4 h92c474e_1 conda-forge
aws-checksums 0.2.7 h92c474e_2 conda-forge
aws-crt-cpp 0.32.10 h186f887_3 conda-forge
aws-sdk-cpp 1.11.510 h379b65b_14 conda-forge
azure-core-cpp 1.14.0 h5cfcd09_0 conda-forge
azure-identity-cpp 1.10.0 h113e628_0 conda-forge
azure-storage-blobs-cpp 12.13.0 h3cf044e_1 conda-forge
azure-storage-common-cpp 12.8.0 h736e048_1 conda-forge
azure-storage-files-datalake-cpp 12.12.0 ha633028_1 conda-forge
babel 2.17.0 pyhd8ed1ab_0 conda-forge
bbknn 1.6.0 py312h0fa9677_4 bioconda
beautifulsoup4 4.13.4 pyha770c72_0 conda-forge
binutils_impl_linux-64 2.44 h4bf12b8_1 conda-forge
bioconductor-assorthead 1.0.0 r44hdfd78af_0 bioconda
bioconductor-basilisk 1.18.0 r44hdfd78af_0 bioconda
bioconductor-basilisk.utils 1.18.0 r44hdfd78af_0 bioconda
bioconductor-beachmat 2.22.0 r44he5774e6_1 bioconda
bioconductor-biobase 2.66.0 r44h3df3fcb_0 bioconda
bioconductor-biocgenerics 0.52.0 r44hdfd78af_3 bioconda
bioconductor-biocio 1.16.0 r44hdfd78af_0 bioconda
bioconductor-biocneighbors 2.0.0 r44he5774e6_1 bioconda
bioconductor-biocparallel 1.40.0 r44he5774e6_1 bioconda
bioconductor-biocsingular 1.22.0 r44he5774e6_1 bioconda
bioconductor-biocviews 1.74.0 r44hdfd78af_0 bioconda
bioconductor-bluster 1.16.0 r44he5774e6_1 bioconda
bioconductor-complexheatmap 2.22.0 r44hdfd78af_0 bioconda
bioconductor-data-packages 20250625 hdfd78af_0 bioconda
bioconductor-delayedarray 0.32.0 r44h3df3fcb_1 bioconda
bioconductor-deseq2 1.46.0 r44he5774e6_1 bioconda
bioconductor-dir.expiry 1.14.0 r44hdfd78af_0 bioconda
bioconductor-edger 4.4.0 r44h3df3fcb_0 bioconda
bioconductor-fgsea 1.32.2 r44he5774e6_0 bioconda
bioconductor-genomeinfodb 1.42.0 r44hdfd78af_2 bioconda
bioconductor-genomeinfodbdata 1.2.13 r44hdfd78af_0 bioconda
bioconductor-genomicranges 1.58.0 r44h3df3fcb_2 bioconda
bioconductor-graph 1.84.0 r44h3df3fcb_1 bioconda
bioconductor-hdf5array 1.34.0 r44h15a9599_1 bioconda
bioconductor-hsmmsinglecell 1.26.0 r44hdfd78af_0 bioconda
bioconductor-iranges 2.40.0 r44h3df3fcb_2 bioconda
bioconductor-limma 3.62.1 r44h15a9599_1 bioconda
bioconductor-loomexperiment 1.24.0 r44hdfd78af_0 bioconda
bioconductor-mast 1.32.0 r44hdfd78af_0 bioconda
bioconductor-matrixgenerics 1.18.0 r44hdfd78af_0 bioconda
bioconductor-metapod 1.14.0 r44he5774e6_1 bioconda
bioconductor-milor 2.2.0 r44he5774e6_0 bioconda
bioconductor-monocle 2.34.0 r44he5774e6_0 bioconda
bioconductor-rbgl 1.82.0 r44he5774e6_1 bioconda
bioconductor-rhdf5 2.50.0 r44h77050f0_1 bioconda
bioconductor-rhdf5filters 1.18.0 r44h77050f0_1 bioconda
bioconductor-rhdf5lib 1.28.0 r44h15a9599_0 bioconda
bioconductor-s4arrays 1.6.0 r44h3df3fcb_1 bioconda
bioconductor-s4vectors 0.44.0 r44h3df3fcb_2 bioconda
bioconductor-scaledmatrix 1.14.0 r44hdfd78af_0 bioconda
bioconductor-scater 1.34.1 r44hdfd78af_0 bioconda
bioconductor-scran 1.34.0 r44he5774e6_1 bioconda
bioconductor-scuttle 1.16.0 r44he5774e6_1 bioconda
bioconductor-singlecellexperiment 1.28.0 r44hdfd78af_0 bioconda
bioconductor-sparsearray 1.6.0 r44h3df3fcb_1 bioconda
bioconductor-summarizedexperiment 1.36.0 r44hdfd78af_0 bioconda
bioconductor-ucsc.utils 1.2.0 r44h9ee0642_1 bioconda
bioconductor-xvector 0.46.0 r44h15a9599_2 bioconda
bioconductor-zellkonverter 1.16.0 r44hdfd78af_0 bioconda
bioconductor-zlibbioc 1.52.0 r44h3df3fcb_2 bioconda
biopython 1.85 py312h66e93f0_1 conda-forge
blas 2.132 openblas conda-forge
blas-devel 3.9.0 32_h1ea3ea9_openblas conda-forge
blast 2.16.0 h66d330f_5 bioconda
bleach 6.2.0 pyh29332c3_4 conda-forge
bleach-with-css 6.2.0 h82add2a_4 conda-forge
blinker 1.9.0 pyhff2d567_0 conda-forge
blosc 1.21.6 he440d0b_1 conda-forge
bokeh 3.7.3 pyhd8ed1ab_0 conda-forge
boltons 25.0.0 pyhd8ed1ab_0 conda-forge
bottleneck 1.5.0 py312hc0a28a1_0 conda-forge
brotli 1.1.0 hb9d3cd8_3 conda-forge
brotli-bin 1.1.0 hb9d3cd8_3 conda-forge
brotli-python 1.1.0 py312h2ec8cdc_3 conda-forge
brunsli 0.1 h9c3ff4c_0 conda-forge
bwidget 1.10.1 ha770c72_1 conda-forge
bzip2 1.0.8 h4bc722e_7 conda-forge
c-ares 1.34.5 hb9d3cd8_0 conda-forge
c-blosc2 2.15.2 h3122c55_1 conda-forge
ca-certificates 2025.8.3 hbd8a1cb_0 conda-forge
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cairo 1.18.4 h3394656_0 conda-forge
cellbender 0.3.0 pypi_0 pypi
cellrank 2.0.7 pyhd8ed1ab_0 conda-forge
celltypist 1.7.1 pyhdfd78af_0 bioconda
certifi 2025.8.3 pyhd8ed1ab_0 conda-forge
certipy 0.2.2 pyhd8ed1ab_0 conda-forge
cffi 1.17.1 py312h06ac9bb_0 conda-forge
charls 2.4.2 h59595ed_0 conda-forge
charset-normalizer 3.4.2 pyhd8ed1ab_0 conda-forge
chex 0.1.90 pyhd8ed1ab_0 conda-forge
click 8.2.2 pyh707e725_0 conda-forge
cloudpickle 3.1.1 pyhd8ed1ab_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_1 conda-forge
comm 0.2.3 pyhe01879c_0 conda-forge
conda 25.5.1 py312h7900ff3_0 conda-forge
conda-libmamba-solver 25.4.0 pyhd8ed1ab_0 conda-forge
conda-package-handling 2.4.0 pyh7900ff3_2 conda-forge
conda-package-streaming 0.12.0 pyhd8ed1ab_0 conda-forge
contourpy 1.3.3 py312hd9148b4_1 conda-forge
cpp-expected 1.1.0 hff21bea_1 conda-forge
cpython 3.12.11 py312hd8ed1ab_0 conda-forge
crc32c 2.7.1 py312h66e93f0_1 conda-forge
cryptography 45.0.5 py312hda17c39_0 conda-forge
curl 8.14.1 h332b0f4_0 conda-forge
cycler 0.12.1 pyhd8ed1ab_1 conda-forge
cython 3.1.2 py312h2614dfc_2 conda-forge
cytoolz 1.0.1 py312h66e93f0_0 conda-forge
dask 2025.7.0 pyhe01879c_0 conda-forge
dask-core 2025.7.0 pyhe01879c_1 conda-forge
dav1d 1.2.1 hd590300_0 conda-forge
dcor 0.6 pyhd8ed1ab_1 conda-forge
debugpy 1.8.15 py312h8285ef7_0 conda-forge
decorator 5.2.1 pyhd8ed1ab_0 conda-forge
decoupler-py 2.1.1 pyhd8ed1ab_0 conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge
deprecated 1.2.18 pyhd8ed1ab_0 conda-forge
dill 0.4.0 pyhd8ed1ab_0 conda-forge
distributed 2025.7.0 pyhe01879c_0 conda-forge
distro 1.9.0 pyhd8ed1ab_1 conda-forge
docrep 0.3.2 pyh44b312d_0 conda-forge
donfig 0.8.1.post1 pyhd8ed1ab_1 conda-forge
dunamai 1.25.0 pyhd8ed1ab_0 conda-forge
entrez-direct 22.4 he881be0_0 bioconda
et_xmlfile 2.0.0 pyhd8ed1ab_1 conda-forge
etils 1.12.2 pyhd8ed1ab_0 conda-forge
exceptiongroup 1.3.0 pyhd8ed1ab_0 conda-forge
executing 2.2.0 pyhd8ed1ab_0 conda-forge
expat 2.7.1 hecca717_0 conda-forge
fastcluster 1.3.0 pypi_0 pypi
fbpca 1.0 pyhd8ed1ab_1 conda-forge
fcsparser 0.2.8 pyhdfd78af_0 bioconda
fftw 3.3.10 mpi_mpich_hbcf76dd_10 conda-forge
filelock 3.18.0 pyhd8ed1ab_0 conda-forge
flax 0.10.2 pyhd8ed1ab_0 conda-forge
fmt 11.2.0 h07f6e7f_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 h77eed37_3 conda-forge
fontconfig 2.15.0 h7e30c49_1 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.59.0 py312h8a5da7c_0 conda-forge
formulaic 1.2.0 py312h7900ff3_2 conda-forge
formulaic-contrasts 1.0.0 pyhdfd78af_0 bioconda
fqdn 1.5.1 pyhd8ed1ab_1 conda-forge
freetype 2.13.3 ha770c72_1 conda-forge
fribidi 1.0.10 h36c2ea0_0 conda-forge
frozendict 2.4.6 py312h66e93f0_0 conda-forge
frozenlist 1.7.0 py312h447239a_0 conda-forge
fsspec 2025.7.0 pyhd8ed1ab_0 conda-forge
future 1.0.0 pyhd8ed1ab_2 conda-forge
gcc_impl_linux-64 15.1.0 h4393ad2_4 conda-forge
geosketch 1.3 pyhdfd78af_0 bioconda
get_version 3.5.5 pyhd8ed1ab_1 conda-forge
gflags 2.2.2 h5888daf_1005 conda-forge
gfortran_impl_linux-64 15.1.0 h3b9cdf2_4 conda-forge
giflib 5.2.2 hd590300_0 conda-forge
git 2.49.0 pl5321h59d505e_0 conda-forge
gitdb 4.0.12 pyhd8ed1ab_0 conda-forge
gitpython 3.1.45 pyhff2d567_0 conda-forge
glog 0.7.1 hbabe93e_0 conda-forge
glpk 5.0 h445213a_0 conda-forge
gmp 6.3.0 hac33072_2 conda-forge
gmpy2 2.2.1 py312h7201bc8_0 conda-forge
graphite2 1.3.14 hecca717_1 conda-forge
greenlet 3.2.3 py312h2ec8cdc_0 conda-forge
grpcio 1.71.0 py312hdcb7bd4_1 conda-forge
gseapy 1.1.9 py312h004ce86_0 bioconda
gsl 2.7 he838d99_0 conda-forge
gxx_impl_linux-64 15.1.0 h6a1bac1_4 conda-forge
h11 0.16.0 pyhd8ed1ab_0 conda-forge
h2 4.2.0 pyhd8ed1ab_0 conda-forge
h5py 3.12.1 nompi_py312hd203070_103 conda-forge
harfbuzz 11.2.1 h3beb420_0 conda-forge
harmonypy 0.0.10 pyhdfd78af_0 bioconda
hdf5 1.14.4 mpi_mpich_h7f58efa_5 conda-forge
hnswlib 0.8.0 py312hc39e661_0 conda-forge
hpack 4.1.0 pyhd8ed1ab_0 conda-forge
httpcore 1.0.9 pyh29332c3_0 conda-forge
httpx 0.28.1 pyhd8ed1ab_0 conda-forge
humanize 4.12.3 pyhd8ed1ab_0 conda-forge
hyperframe 6.1.0 pyhd8ed1ab_0 conda-forge
hypre 2.32.0 mpi_mpich_h2e71eac_1 conda-forge
icu 75.1 he02047a_0 conda-forge
idna 3.10 pyhd8ed1ab_1 conda-forge
igraph 0.10.16 h98b0679_0 conda-forge
imagecodecs 2024.12.30 py312h097a544_0 conda-forge
imageio 2.37.0 pyhfb79c49_0 conda-forge
importlib-metadata 8.7.0 pyhe01879c_1 conda-forge
importlib_resources 6.5.2 pyhd8ed1ab_0 conda-forge
interface_meta 1.3.0 pyhd8ed1ab_1 conda-forge
intervaltree 3.1.0 pyhd8ed1ab_1 conda-forge
ipykernel 6.30.0 pyh82676e8_0 conda-forge
ipympl 0.9.7 pyhd8ed1ab_1 conda-forge
ipython 9.4.0 pyhfa0c392_0 conda-forge
ipython_genutils 0.2.0 pyhd8ed1ab_2 conda-forge
ipython_pygments_lexers 1.1.1 pyhd8ed1ab_0 conda-forge
ipywidgets 8.1.7 pyhd8ed1ab_0 conda-forge
isoduration 20.11.0 pyhd8ed1ab_1 conda-forge
jax 0.6.2 pyhd8ed1ab_0 conda-forge
jaxlib 0.6.2 cpu_py312h73730d4_1 conda-forge
jaxopt 0.8.4 pyhd8ed1ab_0 conda-forge
jedi 0.19.2 pyhd8ed1ab_1 conda-forge
jinja2 3.1.6 pyhd8ed1ab_0 conda-forge
joblib 1.5.1 pyhd8ed1ab_0 conda-forge
jq 1.8.1 h73b1eb8_0 conda-forge
json5 0.12.0 pyhd8ed1ab_0 conda-forge
jsonpatch 1.33 pyhd8ed1ab_1 conda-forge
jsonpointer 3.0.0 py312h7900ff3_1 conda-forge
jsonschema 4.25.0 pyhe01879c_0 conda-forge
jsonschema-specifications 2025.4.1 pyh29332c3_0 conda-forge
jsonschema-with-format-nongpl 4.25.0 he01879c_0 conda-forge
jupyter 1.1.1 pyhd8ed1ab_1 conda-forge
jupyter-lsp 2.2.6 pyhe01879c_0 conda-forge
jupyter-pluto-proxy 0.1.2 pyhd8ed1ab_0 conda-forge
jupyter-server-mathjax 0.2.6 pyhbbac1ac_2 conda-forge
jupyter-server-proxy 4.4.0 pyhd8ed1ab_1 conda-forge
jupyter_client 8.6.3 pyhd8ed1ab_1 conda-forge
jupyter_console 6.6.3 pyhd8ed1ab_1 conda-forge
jupyter_core 5.8.1 pyh31011fe_0 conda-forge
jupyter_events 0.12.0 pyh29332c3_0 conda-forge
jupyter_server 2.16.0 pyhe01879c_0 conda-forge
jupyter_server_terminals 0.5.3 pyhd8ed1ab_1 conda-forge
jupyterhub-base 5.3.0 pyhda7c55b_0 conda-forge
jupyterhub-singleuser 5.3.0 h4422900_0 conda-forge
jupyterlab 4.4.5 pyhd8ed1ab_0 conda-forge
jupyterlab-git 0.51.2 pyhd8ed1ab_0 conda-forge
jupyterlab_execute_time 3.2.0 pyhd8ed1ab_1 conda-forge
jupyterlab_pygments 0.3.0 pyhd8ed1ab_2 conda-forge
jupyterlab_server 2.27.3 pyhd8ed1ab_1 conda-forge
jupyterlab_widgets 3.0.15 pyhd8ed1ab_0 conda-forge
jxrlib 1.1 hd590300_3 conda-forge
kernel-headers_linux-64 5.14.0 he073ed8_2 conda-forge
keyutils 1.6.1 h166bdaf_0 conda-forge
kiwisolver 1.4.8 py312h68727a3_1 conda-forge
krb5 1.21.3 h659f571_0 conda-forge
lark 1.2.2 pyhd8ed1ab_1 conda-forge
lazy-loader 0.4 pyhd8ed1ab_2 conda-forge
lcms2 2.17 h717163a_0 conda-forge
ld_impl_linux-64 2.44 h1423503_1 conda-forge
legacy-api-wrap 1.4.1 pyhd8ed1ab_0 conda-forge
legendkit 0.3.4 pyhd8ed1ab_0 conda-forge
leidenalg 0.10.2 py312h30efb56_0 conda-forge
lerc 4.0.0 h0aef613_1 conda-forge
liana 1.6.0 pypi_0 pypi
libabseil 20250127.1 cxx17_hbbce691_0 conda-forge
libaec 1.1.4 h3f801dc_0 conda-forge
libamd 3.3.3 haaf9dc3_7100102 conda-forge
libarchive 3.8.1 gpl_h98cc613_100 conda-forge
libarrow 20.0.0 h1b9301b_8_cpu conda-forge
libarrow-acero 20.0.0 hcb10f89_8_cpu conda-forge
libarrow-dataset 20.0.0 hcb10f89_8_cpu conda-forge
libarrow-substrait 20.0.0 h1bed206_8_cpu conda-forge
libasprintf 0.25.1 h3f43e3d_1 conda-forge
libavif16 1.3.0 h766b0b6_0 conda-forge
libblas 3.9.0 32_h59b9bed_openblas conda-forge
libbrotlicommon 1.1.0 hb9d3cd8_3 conda-forge
libbrotlidec 1.1.0 hb9d3cd8_3 conda-forge
libbrotlienc 1.1.0 hb9d3cd8_3 conda-forge
libbtf 2.3.2 h32481e8_7100102 conda-forge
libcamd 3.3.3 h32481e8_7100102 conda-forge
libcap 2.75 h39aace5_0 conda-forge
libcblas 3.9.0 32_he106b2a_openblas conda-forge
libccolamd 3.3.4 h32481e8_7100102 conda-forge
libcholmod 5.3.1 h59ddab4_7100102 conda-forge
libcolamd 3.3.4 h32481e8_7100102 conda-forge
libcrc32c 1.1.2 h9c3ff4c_0 conda-forge
libcurl 8.14.1 h332b0f4_0 conda-forge
libdeflate 1.23 h86f0d12_0 conda-forge
libedit 3.1.20250104 pl5321h7949ede_0 conda-forge
libev 4.33 hd590300_2 conda-forge
libevent 2.1.12 hf998b51_1 conda-forge
libexpat 2.7.1 hecca717_0 conda-forge
libfabric 2.2.0 ha770c72_1 conda-forge
libfabric1 2.2.0 h47b3337_1 conda-forge
libffi 3.4.6 h2dba641_1 conda-forge
libfreetype 2.13.3 ha770c72_1 conda-forge
libfreetype6 2.13.3 h48d6fc4_1 conda-forge
libgcc 15.1.0 h767d61c_4 conda-forge
libgcc-devel_linux-64 15.1.0 h4c094af_104 conda-forge
libgcc-ng 15.1.0 h69a702a_4 conda-forge
libgcrypt-lib 1.11.1 hb9d3cd8_0 conda-forge
libgettextpo 0.25.1 h3f43e3d_1 conda-forge
libgfortran 15.1.0 h69a702a_4 conda-forge
libgfortran-ng 15.1.0 h69a702a_4 conda-forge
libgfortran5 15.1.0 hcea5267_4 conda-forge
libgit2 1.8.4 hd24f944_1 conda-forge
libglib 2.84.1 h2ff4ddf_0 conda-forge
libglu 9.0.3 h5888daf_1 conda-forge
libglvnd 1.7.0 ha4b6fd6_2 conda-forge
libgomp 15.1.0 h767d61c_4 conda-forge
libgoogle-cloud 2.36.0 hc4361e1_1 conda-forge
libgoogle-cloud-storage 2.36.0 h0121fbd_1 conda-forge
libgpg-error 1.55 h3f2d84a_0 conda-forge
libgrpc 1.71.0 h8e591d7_1 conda-forge
libhwloc 2.12.1 default_h3d81e11_1000 conda-forge
libhwy 1.2.0 hf40a0c7_0 conda-forge
libiconv 1.18 h4ce23a2_1 conda-forge
libidn2 2.3.8 ha4ef2c3_0 conda-forge
libjpeg-turbo 3.1.0 hb9d3cd8_0 conda-forge
libjxl 0.11.1 h7b0646d_2 conda-forge
libklu 2.3.5 hf24d653_7100102 conda-forge
liblapack 3.9.0 32_h7ac8fdf_openblas conda-forge
liblapacke 3.9.0 32_he2f377e_openblas conda-forge
libleidenalg 0.11.1 h00ab1b0_0 conda-forge
liblzma 5.8.1 hb9d3cd8_2 conda-forge
libmamba 2.3.1 hae34dd5_1 conda-forge
libmambapy 2.3.1 py312ha9ff5c7_1 conda-forge
libnghttp2 1.64.0 h161d5f1_0 conda-forge
libnl 3.11.0 hb9d3cd8_0 conda-forge
libnsl 2.0.1 hb9d3cd8_1 conda-forge
libopenblas 0.3.30 openmp_hd680484_1 conda-forge
libopengl 1.7.0 ha4b6fd6_2 conda-forge
libopentelemetry-cpp 1.21.0 hd1b1c89_0 conda-forge
libopentelemetry-cpp-headers 1.21.0 ha770c72_0 conda-forge
libparquet 20.0.0 h081d1f1_8_cpu conda-forge
libpng 1.6.50 h421ea60_1 conda-forge
libprotobuf 5.29.3 h7460b1f_2 conda-forge
libptscotch 7.0.5 h7ea1560_4 conda-forge
libre2-11 2025.06.26 hba17884_0 conda-forge
libsanitizer 15.1.0 h97b714f_4 conda-forge
libscotch 7.0.5 ha3546ae_4 conda-forge
libsodium 1.0.20 h4ab18f5_0 conda-forge
libsolv 0.7.34 h9463b59_0 conda-forge
libspqr 4.3.4 h852d39f_7100102 conda-forge
libsqlite 3.50.4 h0c1763c_0 conda-forge
libssh2 1.11.1 hcf80075_0 conda-forge
libstdcxx 15.1.0 h8f9b012_4 conda-forge
libstdcxx-devel_linux-64 15.1.0 h4c094af_104 conda-forge
libstdcxx-ng 15.1.0 h4852527_4 conda-forge
libsuitesparseconfig 7.10.1 h92d6892_7100102 conda-forge
libsystemd0 257.7 h4e0b6ca_0 conda-forge
libthrift 0.21.0 h0e7cc3e_0 conda-forge
libtiff 4.7.0 hd9ff511_4 conda-forge
libtorch 2.7.1 cpu_generic_hd123cff_2 conda-forge
libudev1 257.7 hbe16f8c_0 conda-forge
libumfpack 6.3.5 heb53515_7100102 conda-forge
libunistring 0.9.10 h7f98852_0 conda-forge
libutf8proc 2.10.0 h202a827_0 conda-forge
libuuid 2.38.1 h0b41bf4_0 conda-forge
libuv 1.51.0 hb03c661_1 conda-forge
libwebp-base 1.6.0 hd42ef1d_0 conda-forge
libxcb 1.17.0 h8a09558_0 conda-forge
libxcrypt 4.4.36 hd590300_1 conda-forge
libxgboost 3.0.3 cpu_h2ebb00f_0 conda-forge
libxml2 2.13.8 h4bc477f_0 conda-forge
libzlib 1.3.1 hb9d3cd8_2 conda-forge
libzopfli 1.0.3 h9c3ff4c_0 conda-forge
lightning 2.5.2 pyhd8ed1ab_0 conda-forge
lightning-utilities 0.15.0 pyhd8ed1ab_0 conda-forge
llvm-openmp 20.1.8 h4922eb0_1 conda-forge
llvmlite 0.44.0 py312h374181b_1 conda-forge
locket 1.0.0 pyhd8ed1ab_0 conda-forge
loompy 3.0.6 py_0 conda-forge
louvain 0.8.2 py312h2ec8cdc_1 conda-forge
lz4 4.4.4 py312hf0f0c11_0 conda-forge
lz4-c 1.10.0 h5888daf_1 conda-forge
lzo 2.10 h280c20c_1002 conda-forge
make 4.4.1 hb9d3cd8_2 conda-forge
mako 1.3.10 pyhd8ed1ab_0 conda-forge
mamba 2.3.1 hf857f84_1 conda-forge
markdown 3.8.2 pyhd8ed1ab_0 conda-forge
markdown-it-py 3.0.0 pyhd8ed1ab_1 conda-forge
markupsafe 3.0.2 py312h178313f_1 conda-forge
marsilea 0.5.4 pyhd8ed1ab_0 conda-forge
matplotlib-base 3.10.5 py312he3d6523_0 conda-forge
matplotlib-inline 0.1.7 pyhd8ed1ab_1 conda-forge
mdurl 0.1.2 pyhd8ed1ab_1 conda-forge
mellon 1.6.1 pyhd8ed1ab_0 conda-forge
menuinst 2.3.1 py312h7900ff3_0 conda-forge
metis 5.1.0 hd0bcaf9_1007 conda-forge
mistune 3.1.3 pyh29332c3_0 conda-forge
mizani 0.14.2 pyhd8ed1ab_0 conda-forge
ml-collections 1.0.0 pyh29332c3_0 conda-forge
ml_dtypes 0.5.1 py312hf9745cd_0 conda-forge
mpc 1.3.1 h24ddda3_1 conda-forge
mpfr 4.2.1 h90cbb55_3 conda-forge
mpi 1.0.1 mpich conda-forge
mpi4py 4.1.0 py312hcfe685a_100 conda-forge
mpich 4.3.1 h74c0cd0_102 conda-forge
mpmath 1.3.0 pyhd8ed1ab_1 conda-forge
msgpack-python 1.1.1 py312h68727a3_0 conda-forge
mudata 0.3.1 pyhd8ed1ab_1 conda-forge
multidict 6.6.3 py312h178313f_0 conda-forge
multipledispatch 0.6.0 pyhd8ed1ab_1 conda-forge
mumps-include 5.7.3 ha770c72_5 conda-forge
mumps-mpi 5.7.3 hb595572_5 conda-forge
munkres 1.1.4 pyhd8ed1ab_1 conda-forge
muon 0.1.6 pyhd8ed1ab_0 conda-forge
muscle 5.3 h9948957_3 bioconda
narwhals 2.0.1 pyhe01879c_0 conda-forge
natsort 8.4.0 pyh29332c3_1 conda-forge
nbclassic 1.3.1 pyhe01879c_0 conda-forge
nbclient 0.10.2 pyhd8ed1ab_0 conda-forge
nbconvert-core 7.16.6 pyh29332c3_0 conda-forge
nbdime 4.0.2 pyhd8ed1ab_1 conda-forge
nbformat 5.10.4 pyhd8ed1ab_1 conda-forge
ncbi-vdb 3.2.1 h9948957_0 bioconda
ncurses 6.5 h2d0b736_3 conda-forge
nest-asyncio 1.6.0 pyhd8ed1ab_1 conda-forge
networkx 3.5 pyhe01879c_0 conda-forge
nlohmann_json 3.11.3 he02047a_1 conda-forge
nlopt 2.9.0 py312h1d0b465_0 conda-forge
nomkl 1.0 h5ca1d4c_0 conda-forge
notebook 7.4.4 pyhd8ed1ab_0 conda-forge
notebook-shim 0.2.4 pyhd8ed1ab_1 conda-forge
numba 0.61.2 py312h7bcfee6_1 conda-forge
numcodecs 0.16.1 py312hf9745cd_0 conda-forge
numexpr 2.10.2 py312h6a710ac_100 conda-forge
numpy 2.2.6 py312h72c5963_0 conda-forge
numpy_groupies 0.11.3 pyhd8ed1ab_0 conda-forge
numpyro 0.18.0 pyhd8ed1ab_0 conda-forge
oauthlib 3.3.1 pyhd8ed1ab_0 conda-forge
oniguruma 6.9.10 hb9d3cd8_0 conda-forge
openblas 0.3.30 openmp_hd77311e_1 conda-forge
openjpeg 2.5.3 h5fbd93e_0 conda-forge
openpyxl 3.1.5 py312h710cb58_1 conda-forge
openssl 3.5.1 h7b32b05_0 conda-forge
opt_einsum 3.4.0 pyhd8ed1ab_1 conda-forge
optax 0.2.4 pyhd8ed1ab_1 conda-forge
optree 0.17.0 py312hd9148b4_0 conda-forge
orbax-checkpoint 0.8.0 pyhd8ed1ab_1 conda-forge
orc 2.1.2 h17f744e_0 conda-forge
overrides 7.7.0 pyhd8ed1ab_1 conda-forge
packaging 25.0 pyh29332c3_1 conda-forge
palantir 1.4.1 pyh7e72e81_0 bioconda
pamela 1.2.0 pyhd8ed1ab_1 conda-forge
pandas 2.3.1 py312hf79963d_0 conda-forge
pandoc 3.7.0.2 ha770c72_0 conda-forge
pandocfilters 1.5.0 pyhd8ed1ab_0 conda-forge
pango 1.56.3 h9ac818e_1 conda-forge
parmetis 4.0.3 hc7bef4e_1007 conda-forge
parso 0.8.4 pyhd8ed1ab_1 conda-forge
partd 1.4.2 pyhd8ed1ab_0 conda-forge
patsy 1.0.1 pyhd8ed1ab_1 conda-forge
pcre2 10.44 hc749103_2 conda-forge
perl 5.32.1 7_hd590300_perl5 conda-forge
perl-archive-tar 3.04 pl5321hdfd78af_0 bioconda
perl-carp 1.50 pl5321hd8ed1ab_0 conda-forge
perl-common-sense 3.75 pl5321hd8ed1ab_0 conda-forge
perl-compress-raw-bzip2 2.201 pl5321hbf60520_1 conda-forge
perl-compress-raw-zlib 2.202 pl5321hadc24fc_0 conda-forge
perl-encode 3.21 pl5321hb9d3cd8_1 conda-forge
perl-exporter 5.74 pl5321hd8ed1ab_0 conda-forge
perl-exporter-tiny 1.002002 pl5321hd8ed1ab_0 conda-forge
perl-extutils-makemaker 7.70 pl5321hd8ed1ab_0 conda-forge
perl-io-compress 2.201 pl5321h503566f_5 bioconda
perl-io-zlib 1.15 pl5321hdfd78af_1 bioconda
perl-json 4.10 pl5321hdfd78af_1 bioconda
perl-json-xs 4.03 pl5321h9948957_4 bioconda
perl-list-moreutils 0.430 pl5321hdfd78af_0 bioconda
perl-list-moreutils-xs 0.430 pl5321h7b50bb2_5 bioconda
perl-parent 0.243 pl5321hd8ed1ab_0 conda-forge
perl-pathtools 3.75 pl5321hb9d3cd8_2 conda-forge
perl-scalar-list-utils 1.70 pl5321hb03c661_0 conda-forge
perl-storable 3.15 pl5321hb9d3cd8_2 conda-forge
perl-types-serialiser 1.01 pl5321hdfd78af_0 bioconda
petsc 3.22.2 real_hc5e87de_102 conda-forge
petsc4py 3.22.2 py312h84d7c54_0 conda-forge
pexpect 4.9.0 pyhd8ed1ab_1 conda-forge
pickleshare 0.7.5 pyhd8ed1ab_1004 conda-forge
pillow 11.3.0 py312h80c1187_0 conda-forge
pip 25.2 pyh8b19718_0 conda-forge
pixman 0.46.4 h537e5f6_0 conda-forge
platformdirs 4.3.8 pyhe01879c_0 conda-forge
plotnine 0.15.0 pyhd8ed1ab_0 conda-forge
pluggy 1.6.0 pyhd8ed1ab_0 conda-forge
presto 0.7.5 pyhdfd78af_0 bioconda
progressbar2 4.5.0 pyhd8ed1ab_1 conda-forge
prometheus-cpp 1.3.0 ha5d0236_0 conda-forge
prometheus_client 0.22.1 pyhd8ed1ab_0 conda-forge
prompt-toolkit 3.0.51 pyha770c72_0 conda-forge
prompt_toolkit 3.0.51 hd8ed1ab_0 conda-forge
propcache 0.3.1 py312h178313f_0 conda-forge
protobuf 5.29.3 py312h0f4f066_0 conda-forge
psutil 7.0.0 py312h66e93f0_0 conda-forge
pthread-stubs 0.4 hb9d3cd8_1002 conda-forge
ptyprocess 0.7.0 pyhd8ed1ab_1 conda-forge
pure_eval 0.2.3 pyhd8ed1ab_1 conda-forge
py-cpuinfo 9.0.0 pyhd8ed1ab_1 conda-forge
py-xgboost 3.0.3 cpu_pyh718b53a_0 conda-forge
pyarrow 20.0.0 py312h7900ff3_0 conda-forge
pyarrow-core 20.0.0 py312h01725c0_0_cpu conda-forge
pybind11 2.13.6 pyhc790b64_3 conda-forge
pybind11-abi 4 hd8ed1ab_3 conda-forge
pybind11-global 2.13.6 pyh217bc35_3 conda-forge
pybiomart 0.2.0 pyh864c0ab_1 bioconda
pycosat 0.6.6 py312h66e93f0_2 conda-forge
pycparser 2.22 pyh29332c3_1 conda-forge
pydantic 2.11.7 pyh3cfb1c2_0 conda-forge
pydantic-core 2.33.2 py312h680f630_0 conda-forge
pydeseq2 0.5.2 pyhdfd78af_0 bioconda
pygam 0.9.1 pyhd8ed1ab_1 conda-forge
pygments 2.19.2 pyhd8ed1ab_0 conda-forge
pygpcca 1.0.4 pyhd8ed1ab_2 conda-forge
pyjwt 2.10.1 pyhd8ed1ab_0 conda-forge
pynndescent 0.5.13 pyhd8ed1ab_1 conda-forge
pyopengl 3.1.9 pyhd8ed1ab_0 conda-forge
pyparsing 3.2.3 pyhe01879c_2 conda-forge
pyro-api 0.1.2 pyhd8ed1ab_0 conda-forge
pyro-ppl 1.9.1 pyhd8ed1ab_1 conda-forge
pysocks 1.7.1 pyha55dd90_7 conda-forge
pytables 3.10.2 py312hf8651a9_0 conda-forge
python 3.12.11 h9e4cc4f_0_cpython conda-forge
python-annoy 1.17.3 py312h2ec8cdc_2 conda-forge
python-dateutil 2.9.0.post0 pyhe01879c_2 conda-forge
python-fastjsonschema 2.21.1 pyhd8ed1ab_0 conda-forge
python-igraph 0.11.9 py312h0678577_0 conda-forge
python-json-logger 2.0.7 pyhd8ed1ab_0 conda-forge
python-tzdata 2025.2 pyhd8ed1ab_0 conda-forge
python-utils 3.9.1 pyhff2d567_1 conda-forge
python_abi 3.12 8_cp312 conda-forge
pytorch 2.7.1 cpu_generic_py312_hf21a831_2 conda-forge
pytorch-lightning 2.5.2 pyh2a12c56_0 conda-forge
pytz 2025.2 pyhd8ed1ab_0 conda-forge
pywavelets 1.8.0 py312hc0a28a1_0 conda-forge
pyyaml 6.0.2 py312h178313f_2 conda-forge
pyzmq 27.0.1 py312h6748674_0 conda-forge
qhull 2020.2 h434a139_5 conda-forge
r-abind 1.4_5 r44hc72bb7e_1006 conda-forge
r-anndata 0.7.5.6 r44hdfd78af_1 bioconda
r-askpass 1.2.1 r44h2b5f3a1_0 conda-forge
r-assertthat 0.2.1 r44hc72bb7e_5 conda-forge
r-backports 1.5.0 r44hb1dbf0f_1 conda-forge
r-base 4.4.3 h9c32bc2_0 conda-forge
r-base64enc 0.1_3 r44hb1dbf0f_1007 conda-forge
r-beeswarm 0.4.0 r44h2b5f3a1_4 conda-forge
r-bh 1.87.0_1 r44hc72bb7e_0 conda-forge
r-biocmanager 1.30.26 r44hc72bb7e_0 conda-forge
r-bit 4.6.0 r44h2b5f3a1_0 conda-forge
r-bit64 4.6.0_1 r44h2b5f3a1_0 conda-forge
r-bitops 1.0_9 r44h2b5f3a1_0 conda-forge
r-blob 1.2.4 r44hc72bb7e_2 conda-forge
r-boot 1.3_31 r44hc72bb7e_0 conda-forge
r-brew 1.0_10 r44hc72bb7e_1 conda-forge
r-brio 1.1.5 r44hb1dbf0f_1 conda-forge
r-broom 1.0.9 r44hc72bb7e_0 conda-forge
r-broom.helpers 1.21.0 r44hc72bb7e_0 conda-forge
r-bslib 0.9.0 r44hc72bb7e_0 conda-forge
r-cachem 1.1.0 r44hb1dbf0f_1 conda-forge
r-cairo 1.6_2 r44ha60ca25_3 conda-forge
r-callr 3.7.6 r44hc72bb7e_1 conda-forge
r-car 3.1_3 r44hc72bb7e_0 conda-forge
r-cardata 3.0_5 r44hc72bb7e_3 conda-forge
r-cards 0.6.1 r44hc72bb7e_0 conda-forge
r-caret 6.0_94 r44hdb488b9_2 conda-forge
r-catools 1.18.3 r44h93ab643_0 conda-forge
r-cellranger 1.1.0 r44hc72bb7e_1007 conda-forge
r-circlize 0.4.16 r44hc72bb7e_1 conda-forge
r-class 7.3_23 r44h2b5f3a1_0 conda-forge
r-cli 3.6.5 r44h93ab643_0 conda-forge
r-clipr 0.8.0 r44hc72bb7e_3 conda-forge
r-clock 0.7.3 r44h93ab643_0 conda-forge
r-clue 0.3_66 r44h2b5f3a1_0 conda-forge
r-cluster 2.1.8.1 r44hb67ce94_0 conda-forge
r-codetools 0.2_20 r44hc72bb7e_1 conda-forge
r-collections 0.3.8 r44h2b5f3a1_0 conda-forge
r-colorspace 2.1_1 r44hdb488b9_0 conda-forge
r-combinat 0.0_8 r44hc72bb7e_1006 conda-forge
r-commonmark 2.0.0 r44h2b5f3a1_0 conda-forge
r-conflicted 1.2.0 r44h785f33e_2 conda-forge
r-conquer 1.3.3 r44hb424bfc_4 conda-forge
r-corrplot 0.95 r44hc72bb7e_0 conda-forge
r-cowplot 1.2.0 r44hc72bb7e_1 conda-forge
r-cpp11 0.5.2 r44h785f33e_1 conda-forge
r-crayon 1.5.3 r44hc72bb7e_1 conda-forge
r-credentials 2.0.2 r44hc72bb7e_0 conda-forge
r-crosstalk 1.2.1 r44hc72bb7e_1 conda-forge
r-curl 6.4.0 r44h10955f1_1 conda-forge
r-cyclocomp 1.1.1 r44hc72bb7e_1 conda-forge
r-data.table 1.17.8 r44h1c8cec4_0 conda-forge
r-dbi 1.2.3 r44hc72bb7e_1 conda-forge
r-dbplyr 2.5.0 r44hc72bb7e_1 conda-forge
r-ddrtree 0.1.5 r44h0d4f4ea_1007 conda-forge
r-deldir 2.0_4 r44hbcb9c34_1 conda-forge
r-deriv 4.2.0 r44hc72bb7e_0 conda-forge
r-desc 1.4.3 r44hc72bb7e_1 conda-forge
r-devtools 2.4.5 r44hc72bb7e_3 conda-forge
r-diagram 1.6.5 r44ha770c72_3 conda-forge
r-dials 1.4.1 r44hc72bb7e_0 conda-forge
r-dicedesign 1.10 r44hb1dbf0f_1 conda-forge
r-dichromat 2.0_0.1 r44ha770c72_3 conda-forge
r-diffobj 0.3.6 r44h2b5f3a1_0 conda-forge
r-digest 0.6.37 r44h0d4f4ea_0 conda-forge
r-doby 4.7.0 r44hc72bb7e_0 conda-forge
r-dofuture 1.1.2 r44hc72bb7e_0 conda-forge
r-doparallel 1.0.17 r44hc72bb7e_3 conda-forge
r-dotcall64 1.2 r44hb67ce94_0 conda-forge
r-downlit 0.4.4 r44hc72bb7e_1 conda-forge
r-dplyr 1.1.4 r44h0d4f4ea_1 conda-forge
r-dqrng 0.3.2 r44h0d4f4ea_1 conda-forge
r-dtplyr 1.3.1 r44hc72bb7e_2 conda-forge
r-e1071 1.7_16 r44h93ab643_0 conda-forge
r-ellipsis 0.3.2 r44hb1dbf0f_3 conda-forge
r-evaluate 1.0.4 r44hc72bb7e_0 conda-forge
r-fansi 1.0.6 r44hb1dbf0f_1 conda-forge
r-farver 2.1.2 r44ha18555a_1 conda-forge
r-fastcluster 1.3.0 r44h5888daf_0 conda-forge
r-fastdummies 1.7.5 r44hc72bb7e_0 conda-forge
r-fastica 1.2_7 r44h2ae2be5_1 conda-forge
r-fastmap 1.2.0 r44ha18555a_1 conda-forge
r-fastmatch 1.1_6 r44h2b5f3a1_0 conda-forge
r-filelock 1.0.3 r44hb1dbf0f_1 conda-forge
r-fitdistrplus 1.2_4 r44hc72bb7e_0 conda-forge
r-fnn 1.1.4.1 r44h3697838_1 conda-forge
r-fontawesome 0.5.3 r44hc72bb7e_0 conda-forge
r-forcats 1.0.0 r44hc72bb7e_2 conda-forge
r-foreach 1.5.2 r44hc72bb7e_3 conda-forge
r-forecast 8.24.0 r44h9124c8a_0 conda-forge
r-formatr 1.14 r44hc72bb7e_2 conda-forge
r-formula 1.2_5 r44hc72bb7e_2 conda-forge
r-fracdiff 1.5_3 r44h5ac96c0_1 conda-forge
r-fs 1.6.6 r44h93ab643_0 conda-forge
r-furrr 0.3.1 r44hc72bb7e_3 conda-forge
r-futile.logger 1.4.3 r44hc72bb7e_1006 conda-forge
r-futile.options 1.0.1 r44hc72bb7e_1005 conda-forge
r-future 1.67.0 r44h785f33e_0 conda-forge
r-future.apply 1.20.0 r44hc72bb7e_0 conda-forge
r-gameofthrones 1.0.2 r44hc72bb7e_4 conda-forge
r-gargle 1.5.2 r44h785f33e_1 conda-forge
r-gbrd 0.4.12 r44hc72bb7e_1 conda-forge
r-generics 0.1.4 r44hc72bb7e_0 conda-forge
r-gert 2.1.4 r44h017ce79_0 conda-forge
r-getoptlong 1.0.5 r44hc72bb7e_3 conda-forge
r-ggally 2.3.0 r44hc72bb7e_0 conda-forge
r-ggbeeswarm 0.7.2 r44hc72bb7e_2 conda-forge
r-ggforce 0.5.0 r44h93ab643_0 conda-forge
r-ggplot2 3.5.2 r44hc72bb7e_0 conda-forge
r-ggpubr 0.6.1 r44hc72bb7e_0 conda-forge
r-ggraph 2.2.1 r44h93ab643_1 conda-forge
r-ggrastr 1.0.2 r44hc72bb7e_2 conda-forge
r-ggrepel 0.9.6 r44h93ab643_0 conda-forge
r-ggridges 0.5.6 r44hc72bb7e_1 conda-forge
r-ggsci 3.2.0 r44hc72bb7e_1 conda-forge
r-ggsignif 0.6.4 r44hc72bb7e_2 conda-forge
r-ggstats 0.10.0 r44hc72bb7e_0 conda-forge
r-ggthemes 5.1.0 r44hc72bb7e_1 conda-forge
r-gh 1.5.0 r44hc72bb7e_0 conda-forge
r-gitcreds 0.1.2 r44hc72bb7e_3 conda-forge
r-globaloptions 0.1.2 r44ha770c72_3 conda-forge
r-globals 0.18.0 r44hc72bb7e_0 conda-forge
r-glue 1.8.0 r44h2b5f3a1_0 conda-forge
r-goftest 1.2_3 r44hb1dbf0f_3 conda-forge
r-googledrive 2.1.1 r44hc72bb7e_2 conda-forge
r-googlesheets4 1.1.1 r44h785f33e_2 conda-forge
r-gower 1.0.1 r44hb1dbf0f_2 conda-forge
r-gpfit 1.0_9 r44hc72bb7e_0 conda-forge
r-gplots 3.2.0 r44hc72bb7e_0 conda-forge
r-graphlayouts 1.2.2 r44h93ab643_0 conda-forge
r-gridextra 2.3 r44hc72bb7e_1006 conda-forge
r-gtable 0.3.6 r44hc72bb7e_0 conda-forge
r-gtools 3.9.5 r44hb1dbf0f_1 conda-forge
r-hardhat 1.4.1 r44hc72bb7e_0 conda-forge
r-harrypotter 2.1.1 r44hc72bb7e_4 conda-forge
r-haven 2.5.4 r44h0d4f4ea_1 conda-forge
r-here 1.0.1 r44hc72bb7e_3 conda-forge
r-hexbin 1.28.5 r44hb67ce94_0 conda-forge
r-highr 0.11 r44hc72bb7e_1 conda-forge
r-hms 1.1.3 r44hc72bb7e_2 conda-forge
r-htmltools 0.5.8.1 r44ha18555a_1 conda-forge
r-htmlwidgets 1.6.4 r44h785f33e_3 conda-forge
r-httpuv 1.6.15 r44ha18555a_1 conda-forge
r-httr 1.4.7 r44hc72bb7e_1 conda-forge
r-httr2 1.2.1 r44hc72bb7e_0 conda-forge
r-ica 1.0_3 r44hc72bb7e_3 conda-forge
r-ids 1.0.1 r44hc72bb7e_4 conda-forge
r-igraph 2.0.3 r44h510f1ce_1 conda-forge
r-infer 1.0.9 r44hc72bb7e_0 conda-forge
r-ini 0.3.1 r44hc72bb7e_1006 conda-forge
r-ipred 0.9_15 r44hdb488b9_1 conda-forge
r-irdisplay 1.1 r44hd8ed1ab_3 conda-forge
r-irkernel 1.3.2 r44h785f33e_2 conda-forge
r-irlba 2.3.5.1 r44h0d28552_3 conda-forge
r-isoband 0.2.7 r44ha18555a_3 conda-forge
r-iterators 1.0.14 r44hc72bb7e_3 conda-forge
r-jcolors 0.0.5 r44hc72bb7e_1 conda-forge
r-jquerylib 0.1.4 r44hc72bb7e_3 conda-forge
r-jsonlite 2.0.0 r44h2b5f3a1_0 conda-forge
r-kernsmooth 2.23_26 r44h8461fee_0 conda-forge
r-knitr 1.50 r44hc72bb7e_0 conda-forge
r-labeling 0.4.3 r44hc72bb7e_1 conda-forge
r-labelled 2.14.1 r44hc72bb7e_0 conda-forge
r-lambda.r 1.2.4 r44hc72bb7e_4 conda-forge
r-languageserver 0.3.16 r44hdb488b9_1 conda-forge
r-later 1.4.2 r44h93ab643_0 conda-forge
r-lattice 0.22_7 r44h2b5f3a1_0 conda-forge
r-lava 1.8.1 r44hc72bb7e_0 conda-forge
r-lazyeval 0.2.2 r44hb1dbf0f_5 conda-forge
r-leidenbase 0.1.32 r44he61314c_0 conda-forge
r-lhs 1.2.0 r44h0d4f4ea_0 conda-forge
r-lifecycle 1.0.4 r44hc72bb7e_1 conda-forge
r-lintr 3.2.0 r44hc72bb7e_0 conda-forge
r-listenv 0.9.1 r44hc72bb7e_1 conda-forge
r-lme4 1.1_37 r44h93ab643_0 conda-forge
r-lmtest 0.9_40 r44hbcb9c34_3 conda-forge
r-locfit 1.5_9.12 r44h2b5f3a1_0 conda-forge
r-lubridate 1.9.4 r44h2b5f3a1_0 conda-forge
r-magrittr 2.0.3 r44hb1dbf0f_3 conda-forge
r-mapproj 1.2.12 r44h2b5f3a1_0 conda-forge
r-maps 3.4.3 r44h2b5f3a1_0 conda-forge
r-mass 7.3_64 r44h2b5f3a1_0 conda-forge
r-matrix 1.7_3 r44h2ae2be5_0 conda-forge
r-matrixmodels 0.5_4 r44hc72bb7e_0 conda-forge
r-matrixstats 1.5.0 r44h2b5f3a1_0 conda-forge
r-memoise 2.0.1 r44hc72bb7e_3 conda-forge
r-mgcv 1.9_3 r44h2ae2be5_0 conda-forge
r-microbenchmark 1.5.0 r44h2b5f3a1_0 conda-forge
r-mime 0.13 r44h2b5f3a1_0 conda-forge
r-miniui 0.1.2 r44hc72bb7e_0 conda-forge
r-minqa 1.2.8 r44ha936806_0 conda-forge
r-modeldata 1.5.0 r44hc72bb7e_0 conda-forge
r-modelenv 0.2.0 r44hc72bb7e_0 conda-forge
r-modelmetrics 1.2.2.2 r44h0d4f4ea_4 conda-forge
r-modelr 0.1.11 r44hc72bb7e_2 conda-forge
r-munsell 0.5.1 r44hc72bb7e_1 conda-forge
r-nlme 3.1_168 r44hb67ce94_0 conda-forge
r-nloptr 2.2.1 r44hb8c4c88_0 conda-forge
r-nnet 7.3_20 r44h2b5f3a1_0 conda-forge
r-numderiv 2016.8_1.1 r44hc72bb7e_6 conda-forge
r-nycflights13 1.0.2 r44h785f33e_4 conda-forge
r-oompabase 3.2.10 r44hc72bb7e_0 conda-forge
r-openssl 2.3.3 r44he8289e2_0 conda-forge
r-paletteer 1.6.0 r44hc72bb7e_1 conda-forge
r-palr 0.4.0 r44hc72bb7e_1 conda-forge
r-pals 1.10 r44hc72bb7e_0 conda-forge
r-paralleldist 0.2.6 r44hb79369c_3 conda-forge
r-parallelly 1.45.1 r44h54b55ab_0 conda-forge
r-parsnip 1.3.2 r44hc72bb7e_0 conda-forge
r-patchwork 1.3.1 r44hc72bb7e_0 conda-forge
r-pbapply 1.7_4 r44hc72bb7e_0 conda-forge
r-pbdzmq 0.3_14 r44h549f438_0 conda-forge
r-pbkrtest 0.5.5 r44hc72bb7e_0 conda-forge
r-pheatmap 1.0.13 r44hc72bb7e_0 conda-forge
r-pillar 1.11.0 r44hc72bb7e_0 conda-forge
r-pkgbuild 1.4.8 r44hc72bb7e_0 conda-forge
r-pkgconfig 2.0.3 r44hc72bb7e_4 conda-forge
r-pkgdown 2.1.3 r44hc72bb7e_0 conda-forge
r-pkgload 1.4.0 r44hc72bb7e_0 conda-forge
r-plogr 0.2.0 r44hc72bb7e_1006 conda-forge
r-plotly 4.11.0 r44hc72bb7e_0 conda-forge
r-plyr 1.8.9 r44h3697838_2 conda-forge
r-png 0.1_8 r44h21f035c_2 conda-forge
r-polyclip 1.10_7 r44h0d4f4ea_0 conda-forge
r-polynom 1.4_1 r44hc72bb7e_3 conda-forge
r-pracma 2.4.4 r44hc72bb7e_1 conda-forge
r-praise 1.0.0 r44hc72bb7e_1008 conda-forge
r-prettyunits 1.2.0 r44hc72bb7e_1 conda-forge
r-prismatic 1.1.2 r44hc72bb7e_1 conda-forge
r-proc 1.19.0.1 r44h3697838_0 conda-forge
r-processx 3.8.6 r44h2b5f3a1_0 conda-forge
r-prodlim 2025.04.28 r44h93ab643_0 conda-forge
r-profvis 0.4.0 r44h2b5f3a1_0 conda-forge
r-progress 1.2.3 r44hc72bb7e_1 conda-forge
r-progressr 0.15.1 r44hc72bb7e_0 conda-forge
r-promises 1.3.2 r44h93ab643_0 conda-forge
r-proxy 0.4_27 r44hb1dbf0f_3 conda-forge
r-ps 1.9.1 r44h2b5f3a1_0 conda-forge
r-purrr 1.1.0 r44h54b55ab_0 conda-forge
r-quadprog 1.5_8 r44hc2011d3_6 conda-forge
r-quantmod 0.4.28 r44hc72bb7e_0 conda-forge
r-quantreg 6.00 r44h012206f_0 conda-forge
r-r.cache 0.17.0 r44hc72bb7e_0 conda-forge
r-r.methodss3 1.8.2 r44hc72bb7e_3 conda-forge
r-r.oo 1.27.1 r44hc72bb7e_0 conda-forge
r-r.utils 2.13.0 r44hc72bb7e_0 conda-forge
r-r6 2.6.1 r44hc72bb7e_0 conda-forge
r-ragg 1.4.0 r44hdcc764c_0 conda-forge
r-randomforest 4.7_1.2 r44hb67ce94_0 conda-forge
r-rann 2.6.2 r44h93ab643_0 conda-forge
r-rappdirs 0.3.3 r44hb1dbf0f_3 conda-forge
r-rbibutils 2.3 r44h2b5f3a1_0 conda-forge
r-rcmdcheck 1.4.0 r44h785f33e_3 conda-forge
r-rcolorbrewer 1.1_3 r44h785f33e_3 conda-forge
r-rcpp 1.1.0 r44h93ab643_0 conda-forge
r-rcppannoy 0.0.22 r44ha18555a_1 conda-forge
r-rcpparmadillo 14.6.0_1 r44h3704496_0 conda-forge
r-rcppeigen 0.3.4.0.2 r44hb79369c_0 conda-forge
r-rcpphnsw 0.6.0 r44h0d4f4ea_1 conda-forge
r-rcppml 0.3.7 r44h93ab643_3 conda-forge
r-rcppparallel 5.1.9 r44h93ab643_1 conda-forge
r-rcppprogress 0.4.2 r44hc72bb7e_4 conda-forge
r-rcpptoml 0.2.3 r44h93ab643_0 conda-forge
r-rcurl 1.98_1.16 r44he8228da_1 conda-forge
r-rdpack 2.6.4 r44hc72bb7e_0 conda-forge
r-readr 2.1.5 r44h0d4f4ea_1 conda-forge
r-readxl 1.4.5 r44h328fee5_0 conda-forge
r-recipes 1.3.1 r44hc72bb7e_0 conda-forge
r-reformulas 0.4.1 r44hc72bb7e_0 conda-forge
r-rematch 2.0.0 r44hc72bb7e_1 conda-forge
r-rematch2 2.1.2 r44hc72bb7e_4 conda-forge
r-remotes 2.5.0 r44hc72bb7e_1 conda-forge
r-repr 1.1.7 r44h785f33e_1 conda-forge
r-reprex 2.1.1 r44hc72bb7e_1 conda-forge
r-reshape2 1.4.4 r44h0d4f4ea_4 conda-forge
r-reticulate 1.43.0 r44h3697838_0 conda-forge
r-rex 1.2.1 r44hc72bb7e_3 conda-forge
r-rgl 1.3.24 r44he96d32b_0 conda-forge
r-rjson 0.2.23 r44h93ab643_0 conda-forge
r-rlang 1.1.6 r44h93ab643_0 conda-forge
r-rmarkdown 2.29 r44hc72bb7e_0 conda-forge
r-rocr 1.0_11 r44hc72bb7e_4 conda-forge
r-rodbc 1.3_26 r44h54b55ab_0 conda-forge
r-roxygen2 7.3.2 r44h0d4f4ea_1 conda-forge
r-rpart 4.1.24 r44h2b5f3a1_0 conda-forge
r-rprojroot 2.1.0 r44hc72bb7e_0 conda-forge
r-rsample 1.3.1 r44hc72bb7e_0 conda-forge
r-rspectra 0.16_2 r44h3704496_1 conda-forge
r-rsqlite 2.4.2 r44h3697838_0 conda-forge
r-rstatix 0.7.2 r44hc72bb7e_2 conda-forge
r-rstudioapi 0.17.1 r44hc72bb7e_0 conda-forge
r-rsvd 1.0.5 r44hc72bb7e_3 conda-forge
r-rtsne 0.17 r44hf1899b2_2 conda-forge
r-runit 0.4.33.1 r44hc72bb7e_0 conda-forge
r-rversions 2.1.2 r44hc72bb7e_3 conda-forge
r-rvest 1.0.4 r44hc72bb7e_1 conda-forge
r-s7 0.2.0 r44h54b55ab_0 conda-forge
r-sass 0.4.10 r44h93ab643_0 conda-forge
r-scales 1.4.0 r44hc72bb7e_0 conda-forge
r-scattermore 1.2 r44h0d4f4ea_3 conda-forge
r-scico 1.5.0 r44hc72bb7e_1 conda-forge
r-sctransform 0.4.2 r44hc2d650c_0 conda-forge
r-selectr 0.4_2 r44hc72bb7e_4 conda-forge
r-sessioninfo 1.2.3 r44hc72bb7e_0 conda-forge
r-seurat 5.3.0 r44h93ab643_0 conda-forge
r-seuratobject 5.1.0 r44h93ab643_0 conda-forge
r-sfd 0.1.0 r44hc72bb7e_1 conda-forge
r-shape 1.4.6.1 r44ha770c72_1 conda-forge
r-shiny 1.11.1 r44h785f33e_0 conda-forge
r-sitmo 2.0.2 r44h0d4f4ea_3 conda-forge
r-slam 0.1_55 r44h0444075_0 conda-forge
r-slider 0.3.2 r44h93ab643_0 conda-forge
r-snow 0.4_4 r44hc72bb7e_3 conda-forge
r-sourcetools 0.1.7_1 r44ha18555a_2 conda-forge
r-sp 2.2_0 r44h2b5f3a1_0 conda-forge
r-spam 2.11_1 r44h18dfbaa_0 conda-forge
r-sparsem 1.84_2 r44hc4980d5_0 conda-forge
r-sparsevctrs 0.3.4 r44h2b5f3a1_0 conda-forge
r-spatstat.data 3.1_6 r44hc72bb7e_0 conda-forge
r-spatstat.explore 3.5_2 r44h54b55ab_0 conda-forge
r-spatstat.geom 3.5_0 r44h54b55ab_0 conda-forge
r-spatstat.random 3.4_1 r44h93ab643_0 conda-forge
r-spatstat.sparse 3.1_0 r44hdb488b9_1 conda-forge
r-spatstat.univar 3.1_4 r44h54b55ab_0 conda-forge
r-spatstat.utils 3.1_5 r44h54b55ab_0 conda-forge
r-squarem 2021.1 r44hc72bb7e_3 conda-forge
r-statmod 1.5.0 r44ha36c22a_2 conda-forge
r-stringi 1.8.7 r44h3c328a7_0 conda-forge
r-stringr 1.5.1 r44h785f33e_1 conda-forge
r-styler 1.10.3 r44hc72bb7e_1 conda-forge
r-survival 3.8_3 r44h2b5f3a1_0 conda-forge
r-sys 3.4.3 r44h2b5f3a1_0 conda-forge
r-systemfonts 1.2.3 r44h5c043a3_0 conda-forge
r-tensor 1.5.1 r44hc72bb7e_0 conda-forge
r-testthat 3.2.3 r44h3697838_1 conda-forge
r-textshaping 1.0.1 r44h16f7c1a_0 conda-forge
r-tibble 3.3.0 r44h2b5f3a1_0 conda-forge
r-tidygraph 1.3.0 r44h0d4f4ea_1 conda-forge
r-tidymodels 1.3.0 r44hc72bb7e_0 conda-forge
r-tidyr 1.3.1 r44h0d4f4ea_1 conda-forge
r-tidyselect 1.2.1 r44hc72bb7e_1 conda-forge
r-tidyverse 2.0.0 r44h785f33e_2 conda-forge
r-timechange 0.3.0 r44ha18555a_1 conda-forge
r-timedate 4041.110 r44hc72bb7e_0 conda-forge
r-tinytex 0.57 r44hc72bb7e_0 conda-forge
r-tseries 0.10_58 r44h8461fee_0 conda-forge
r-ttr 0.24.4 r44hdb488b9_1 conda-forge
r-tune 1.3.0 r44hc72bb7e_1 conda-forge
r-tweenr 2.0.3 r44h0d4f4ea_1 conda-forge
r-tzdb 0.5.0 r44h93ab643_0 conda-forge
r-urca 1.3_4 r44hbcb9c34_1 conda-forge
r-urlchecker 1.0.1 r44hc72bb7e_3 conda-forge
r-usethis 3.1.0 r44hc72bb7e_0 conda-forge
r-utf8 1.2.6 r44h2b5f3a1_0 conda-forge
r-uuid 1.2_1 r44hdb488b9_0 conda-forge
r-uwot 0.2.3 r44h93ab643_0 conda-forge
r-vctrs 0.6.5 r44h0d4f4ea_1 conda-forge
r-vgam 1.1_13 r44hb67ce94_0 conda-forge
r-vipor 0.4.7 r44hc72bb7e_1 conda-forge
r-viridis 0.6.5 r44hc72bb7e_1 conda-forge
r-viridislite 0.4.2 r44hc72bb7e_2 conda-forge
r-vroom 1.6.5 r44h0d4f4ea_1 conda-forge
r-waldo 0.6.2 r44hc72bb7e_0 conda-forge
r-warp 0.2.1 r44hb1dbf0f_1 conda-forge
r-whisker 0.4.1 r44hc72bb7e_2 conda-forge
r-withr 3.0.2 r44hc72bb7e_0 conda-forge
r-workflows 1.2.0 r44hc72bb7e_0 conda-forge
r-workflowsets 1.1.1 r44h785f33e_0 conda-forge
r-writexl 1.5.4 r44he23165d_0 conda-forge
r-xfun 0.52 r44h93ab643_0 conda-forge
r-xml 3.99_0.17 r44h5bae778_2 conda-forge
r-xml2 1.3.8 r44h1bb2df6_0 conda-forge
r-xmlparsedata 1.0.5 r44hc72bb7e_3 conda-forge
r-xopen 1.0.1 r44hc72bb7e_1 conda-forge
r-xtable 1.8_4 r44hc72bb7e_6 conda-forge
r-xts 0.14.1 r44h2b5f3a1_0 conda-forge
r-yaml 2.3.10 r44hdb488b9_0 conda-forge
r-yardstick 1.3.2 r44h2b5f3a1_0 conda-forge
r-zip 2.3.3 r44h2b5f3a1_0 conda-forge
r-zoo 1.8_14 r44h2b5f3a1_0 conda-forge
rav1e 0.7.1 h8fae777_3 conda-forge
rdma-core 58.0 h5888daf_0 conda-forge
re2 2025.06.26 h9925aae_0 conda-forge
readline 8.2 h8c095d6_2 conda-forge
referencing 0.36.2 pyh29332c3_0 conda-forge
reproc 14.2.5.post0 hb9d3cd8_0 conda-forge
reproc-cpp 14.2.5.post0 h5888daf_0 conda-forge
requests 2.32.4 pyhd8ed1ab_0 conda-forge
requests-cache 0.4.13 pypi_0 pypi
requests_cache 0.4.13 py_0 conda-forge
rfc3339-validator 0.1.4 pyhd8ed1ab_1 conda-forge
rfc3986-validator 0.1.1 pyh9f0ad1d_0 conda-forge
rfc3987-syntax 1.1.0 pyhe01879c_1 conda-forge
rich 14.1.0 pyhe01879c_0 conda-forge
rpds-py 0.26.0 py312h680f630_0 conda-forge
rpsbproc 0.5.0 hd6d6fdc_3 bioconda
rpy2 3.6.2 py312r44h4bada26_0 conda-forge
ruamel.yaml 0.18.14 py312h66e93f0_0 conda-forge
ruamel.yaml.clib 0.2.8 py312h66e93f0_1 conda-forge
s2n 1.5.22 h96f233e_0 conda-forge
scalapack 2.2.0 h7e29ba8_4 conda-forge
scanorama 1.7.4 pyhdfd78af_0 bioconda
scanpy 1.11.4 pyhd8ed1ab_0 conda-forge
scikit-image 0.25.2 py312hf9745cd_1 conda-forge
scikit-learn 1.7.1 py312h4f0b9e3_0 conda-forge
scikit-misc 0.5.1 pypi_0 pypi
scipy 1.16.0 py312hf734454_0 conda-forge
scrublet 0.2.3 pyh5e36f6f_1 bioconda
scvelo 0.3.3 pyhd8ed1ab_0 conda-forge
scvi-tools 1.3.3 pyhd8ed1ab_0 conda-forge
seaborn 0.13.2 hd8ed1ab_3 conda-forge
seaborn-base 0.13.2 pyhd8ed1ab_3 conda-forge
sed 4.9 h6688a6e_0 conda-forge
send2trash 1.8.3 pyh0d859eb_1 conda-forge
session-info 1.0.0 pyhd8ed1ab_0 conda-forge
session-info2 0.2 pyhd8ed1ab_0 conda-forge
setuptools 80.9.0 pyhff2d567_0 conda-forge
simdjson 3.13.0 h84d6215_0 conda-forge
simpervisor 1.0.0 pyhd8ed1ab_1 conda-forge
six 1.17.0 pyhe01879c_1 conda-forge
sleef 3.8 h1b44611_0 conda-forge
slepc 3.22.2 real_h754b140_300 conda-forge
slepc4py 3.22.2 py312h377abe1_0 conda-forge
smmap 5.0.2 pyhd8ed1ab_0 conda-forge
snappy 1.2.2 h03e3b7b_0 conda-forge
sniffio 1.3.1 pyhd8ed1ab_1 conda-forge
sortedcontainers 2.4.0 pyhd8ed1ab_1 conda-forge
soupsieve 2.7 pyhd8ed1ab_0 conda-forge
sparse 0.17.0 pyhcf101f3_0 conda-forge
sqlalchemy 2.0.42 py312h4c3975b_0 conda-forge
stack_data 0.6.3 pyhd8ed1ab_1 conda-forge
statsmodels 0.14.5 py312h8b63200_0 conda-forge
stdlib-list 0.11.1 pyhd8ed1ab_0 conda-forge
superlu 5.2.2 h00795ac_0 conda-forge
superlu_dist 9.1.0 h0804ebd_0 conda-forge
svt-av1 3.0.2 h5888daf_0 conda-forge
sympy 1.14.0 pyh2585a3b_105 conda-forge
sysroot_linux-64 2.34 h087de78_2 conda-forge
tbb 2022.2.0 hb60516a_0 conda-forge
tblib 3.1.0 pyhd8ed1ab_0 conda-forge
tensorboard 2.20.0 pyhe01879c_0 conda-forge
tensorboard-data-server 0.7.0 py312hda17c39_2 conda-forge
tensorstore 0.1.65 py312h7ad7742_5 conda-forge
terminado 0.18.1 pyh0d859eb_0 conda-forge
texttable 1.7.0 pyhd8ed1ab_1 conda-forge
threadpoolctl 3.6.0 pyhecae5ae_0 conda-forge
tifffile 2025.6.11 pyhd8ed1ab_0 conda-forge
tinycss2 1.4.0 pyhd8ed1ab_0 conda-forge
tk 8.6.13 noxft_hd72426e_102 conda-forge
tktable 2.10 h8d826fa_7 conda-forge
toml 0.10.2 pyhd8ed1ab_1 conda-forge
tomli 2.2.1 pyhe01879c_2 conda-forge
tomlkit 0.13.3 pyha770c72_0 conda-forge
toolz 1.0.0 pyhd8ed1ab_1 conda-forge
torchmetrics 1.8.0 pyhd8ed1ab_0 conda-forge
tornado 6.5.1 py312h66e93f0_0 conda-forge
tqdm 4.67.1 pyhd8ed1ab_1 conda-forge
traitlets 5.14.3 pyhd8ed1ab_1 conda-forge
truststore 0.10.3 pyhe01879c_0 conda-forge
types-python-dateutil 2.9.0.20250708 pyhd8ed1ab_0 conda-forge
typing-extensions 4.14.1 h4440ef1_0 conda-forge
typing-inspection 0.4.1 pyhd8ed1ab_0 conda-forge
typing_extensions 4.14.1 pyhe01879c_0 conda-forge
typing_utils 0.1.0 pyhd8ed1ab_1 conda-forge
tzdata 2025b h78e105d_0 conda-forge
tzlocal 5.3 py312h7900ff3_0 conda-forge
ucx 1.18.1 h990bcc0_2 conda-forge
umap-learn 0.5.9.post2 py312h7900ff3_0 conda-forge
unicodedata2 16.0.0 py312h66e93f0_0 conda-forge
unixodbc 2.3.12 h661eb56_0 conda-forge
uri-template 1.3.0 pyhd8ed1ab_1 conda-forge
urllib3 2.5.0 pyhd8ed1ab_0 conda-forge
vsearch 2.30.0 hd6d6fdc_0 bioconda
wcwidth 0.2.13 pyhd8ed1ab_1 conda-forge
webcolors 24.11.1 pyhd8ed1ab_0 conda-forge
webencodings 0.5.1 pyhd8ed1ab_3 conda-forge
websocket-client 1.8.0 pyhd8ed1ab_1 conda-forge
werkzeug 3.1.3 pyhd8ed1ab_1 conda-forge
wget 1.21.4 hda4d442_0 conda-forge
wheel 0.45.1 pyhd8ed1ab_1 conda-forge
widgetsnbextension 4.0.14 pyhd8ed1ab_0 conda-forge
wrapt 1.17.2 py312h66e93f0_0 conda-forge
xarray 2025.7.1 pyhd8ed1ab_0 conda-forge
xgboost 3.0.3 cpu_pyhb39878e_0 conda-forge
xlrd 2.0.1 pyhd8ed1ab_3 conda-forge
xmltodict 0.14.2 pyhd8ed1ab_1 conda-forge
xorg-libice 1.1.2 hb9d3cd8_0 conda-forge
xorg-libsm 1.2.6 he73a12e_0 conda-forge
xorg-libx11 1.8.12 h4f16b4b_0 conda-forge
xorg-libxau 1.0.12 hb9d3cd8_0 conda-forge
xorg-libxdmcp 1.1.5 hb9d3cd8_0 conda-forge
xorg-libxext 1.3.6 hb9d3cd8_0 conda-forge
xorg-libxfixes 6.0.1 hb9d3cd8_0 conda-forge
xorg-libxrender 0.9.12 hb9d3cd8_0 conda-forge
xorg-libxt 1.3.1 hb9d3cd8_0 conda-forge
xyzservices 2025.4.0 pyhd8ed1ab_0 conda-forge
yaml 0.2.5 h280c20c_3 conda-forge
yaml-cpp 0.8.0 h3f2d84a_0 conda-forge
yarl 1.20.1 py312h178313f_0 conda-forge
yq 3.4.3 pyhe01879c_2 conda-forge
zarr 3.1.1 pyhe01879c_0 conda-forge
zeromq 4.3.5 h3b0a872_7 conda-forge
zfp 1.0.1 h5888daf_2 conda-forge
zict 3.0.0 pyhd8ed1ab_1 conda-forge
zipp 3.23.0 pyhd8ed1ab_0 conda-forge
zlib 1.3.1 hb9d3cd8_2 conda-forge
zlib-ng 2.2.4 h7955e40_0 conda-forge
zstandard 0.23.0 py312h66e93f0_2 conda-forge
zstd 1.5.7 hb8e6e7a_2 conda-forge
apt list --installed:
WARNING: apt does not have a stable CLI interface. Use with caution in scripts.
Listing...
adduser/now 3.137ubuntu1 all [installed,local]
apt/now 2.8.3 amd64 [installed,local]
base-files/now 13ubuntu10.2 amd64 [installed,local]
base-passwd/now 3.6.3build1 amd64 [installed,local]
bash/now 5.2.21-2ubuntu4 amd64 [installed,local]
binutils-common/now 2.42-4ubuntu2.5 amd64 [installed,local]
binutils-x86-64-linux-gnu/now 2.42-4ubuntu2.5 amd64 [installed,local]
binutils/now 2.42-4ubuntu2.5 amd64 [installed,local]
bsdutils/now 1:2.39.3-9ubuntu6.3 amd64 [installed,local]
build-essential/now 12.10ubuntu1 amd64 [installed,local]
bzip2/now 1.0.8-5.1build0.1 amd64 [installed,local]
ca-certificates/now 20240203 all [installed,local]
cm-super-minimal/now 0.3.4-17 all [installed,local]
cm-super/now 0.3.4-17 all [installed,local]
coreutils/now 9.4-3ubuntu6 amd64 [installed,local]
cpp-13-x86-64-linux-gnu/now 13.3.0-6ubuntu2~24.04 amd64 [installed,local]
cpp-13/now 13.3.0-6ubuntu2~24.04 amd64 [installed,local]
cpp-x86-64-linux-gnu/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
cpp/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
curl/now 8.5.0-2ubuntu10.6 amd64 [installed,local]
dash/now 0.5.12-6ubuntu5 amd64 [installed,local]
debconf/now 1.5.86ubuntu1 all [installed,local]
debianutils/now 5.17build1 amd64 [installed,local]
diffutils/now 1:3.10-1build1 amd64 [installed,local]
dpkg-dev/now 1.22.6ubuntu6.1 all [installed,local]
dpkg/now 1.22.6ubuntu6.1 amd64 [installed,local]
dvipng/now 1.15-1.1 amd64 [installed,local]
e2fsprogs/now 1.47.0-2.4~exp1ubuntu4.1 amd64 [installed,local]
ffmpeg/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
findutils/now 4.9.0-5build1 amd64 [installed,local]
fontconfig-config/now 2.15.0-1.1ubuntu2 amd64 [installed,local]
fontconfig/now 2.15.0-1.1ubuntu2 amd64 [installed,local]
fonts-dejavu-core/now 2.37-8 all [installed,local]
fonts-dejavu-extra/now 2.37-8 all [installed,local]
fonts-dejavu-mono/now 2.37-8 all [installed,local]
fonts-dejavu/now 2.37-8 all [installed,local]
fonts-liberation/now 1:2.1.5-3 all [installed,local]
fonts-lmodern/now 2.005-1 all [installed,local]
fonts-urw-base35/now 20200910-8 all [installed,local]
g++-13-x86-64-linux-gnu/now 13.3.0-6ubuntu2~24.04 amd64 [installed,local]
g++-13/now 13.3.0-6ubuntu2~24.04 amd64 [installed,local]
g++-x86-64-linux-gnu/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
g++/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
gcc-13-base/now 13.3.0-6ubuntu2~24.04 amd64 [installed,local]
gcc-13-x86-64-linux-gnu/now 13.3.0-6ubuntu2~24.04 amd64 [installed,local]
gcc-13/now 13.3.0-6ubuntu2~24.04 amd64 [installed,local]
gcc-14-base/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
gcc-x86-64-linux-gnu/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
gcc/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
gfortran-13-x86-64-linux-gnu/now 13.3.0-6ubuntu2~24.04 amd64 [installed,local]
gfortran-13/now 13.3.0-6ubuntu2~24.04 amd64 [installed,local]
gfortran-x86-64-linux-gnu/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
gfortran/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
ghostscript/now 10.02.1~dfsg1-0ubuntu7.7 amd64 [installed,local]
git-lfs/now 3.4.1-1ubuntu0.3 amd64 [installed,local]
git-man/now 1:2.43.0-1ubuntu7.3 all [installed,local]
git/now 1:2.43.0-1ubuntu7.3 amd64 [installed,local]
gpgv/now 2.4.4-2ubuntu17.3 amd64 [installed,local]
grep/now 3.11-4build1 amd64 [installed,local]
gzip/now 1.12-1ubuntu3.1 amd64 [installed,local]
hostname/now 3.23+nmu2ubuntu2 amd64 [installed,local]
init-system-helpers/now 1.66ubuntu1 all [installed,local]
less/now 590-2ubuntu2.1 amd64 [installed,local]
libacl1/now 2.3.2-1build1.1 amd64 [installed,local]
libaom3/now 3.8.2-2ubuntu0.1 amd64 [installed,local]
libapache-pom-java/now 29-2 all [installed,local]
libapparmor1/now 4.0.1really4.0.1-0ubuntu0.24.04.4 amd64 [installed,local]
libapt-pkg6.0t64/now 2.8.3 amd64 [installed,local]
libasan8/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
libasound2-data/now 1.2.11-1ubuntu0.1 all [installed,local]
libasound2t64/now 1.2.11-1ubuntu0.1 amd64 [installed,local]
libass9/now 1:0.17.1-2build1 amd64 [installed,local]
libassuan0/now 2.5.6-1build1 amd64 [installed,local]
libasyncns0/now 0.8-6build4 amd64 [installed,local]
libatomic1/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
libattr1/now 1:2.5.2-1build1.1 amd64 [installed,local]
libaudit-common/now 1:3.1.2-2.1build1.1 all [installed,local]
libaudit1/now 1:3.1.2-2.1build1.1 amd64 [installed,local]
libavahi-client3/now 0.8-13ubuntu6 amd64 [installed,local]
libavahi-common-data/now 0.8-13ubuntu6 amd64 [installed,local]
libavahi-common3/now 0.8-13ubuntu6 amd64 [installed,local]
libavc1394-0/now 0.5.4-5build3 amd64 [installed,local]
libavcodec60/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libavdevice60/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libavfilter9/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libavformat60/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libavutil58/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libbinutils/now 2.42-4ubuntu2.5 amd64 [installed,local]
libblas3/now 3.12.0-3build1.1 amd64 [installed,local]
libblkid1/now 2.39.3-9ubuntu6.3 amd64 [installed,local]
libbluray2/now 1:1.3.4-1build1 amd64 [installed,local]
libbrotli1/now 1.1.0-2build2 amd64 [installed,local]
libbs2b0/now 3.1.0+dfsg-7build1 amd64 [installed,local]
libbsd0/now 0.12.1-1build1.1 amd64 [installed,local]
libbz2-1.0/now 1.0.8-5.1build0.1 amd64 [installed,local]
libc-bin/now 2.39-0ubuntu8.5 amd64 [installed,local]
libc-dev-bin/now 2.39-0ubuntu8.5 amd64 [installed,local]
libc6-dev/now 2.39-0ubuntu8.5 amd64 [installed,local]
libc6/now 2.39-0ubuntu8.5 amd64 [installed,local]
libcaca0/now 0.99.beta20-4build2 amd64 [installed,local]
libcairo-gobject2/now 1.18.0-3build1 amd64 [installed,local]
libcairo2/now 1.18.0-3build1 amd64 [installed,local]
libcap-ng0/now 0.8.4-2build2 amd64 [installed,local]
libcap2/now 1:2.66-5ubuntu2.2 amd64 [installed,local]
libcbor0.10/now 0.10.2-1.2ubuntu2 amd64 [installed,local]
libcc1-0/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
libcdio-cdda2t64/now 10.2+2.0.1-1.1build2 amd64 [installed,local]
libcdio-paranoia2t64/now 10.2+2.0.1-1.1build2 amd64 [installed,local]
libcdio19t64/now 2.1.0-4.1ubuntu1.2 amd64 [installed,local]
libchromaprint1/now 1.5.1-5 amd64 [installed,local]
libcjson1/now 1.7.17-1 amd64 [installed,local]
libcodec2-1.2/now 1.2.0-2build1 amd64 [installed,local]
libcom-err2/now 1.47.0-2.4~exp1ubuntu4.1 amd64 [installed,local]
libcommons-logging-java/now 1.3.0-1ubuntu1 all [installed,local]
libcommons-parent-java/now 56-1 all [installed,local]
libcrypt-dev/now 1:4.4.36-4build1 amd64 [installed,local]
libcrypt1/now 1:4.4.36-4build1 amd64 [installed,local]
libctf-nobfd0/now 2.42-4ubuntu2.5 amd64 [installed,local]
libctf0/now 2.42-4ubuntu2.5 amd64 [installed,local]
libcups2t64/now 2.4.7-1.2ubuntu7.3 amd64 [installed,local]
libcurl3t64-gnutls/now 8.5.0-2ubuntu10.6 amd64 [installed,local]
libcurl4t64/now 8.5.0-2ubuntu10.6 amd64 [installed,local]
libdatrie1/now 0.2.13-3build1 amd64 [installed,local]
libdav1d7/now 1.4.1-1build1 amd64 [installed,local]
libdb5.3t64/now 5.3.28+dfsg2-7 amd64 [installed,local]
libdbus-1-3/now 1.14.10-4ubuntu4.1 amd64 [installed,local]
libdc1394-25/now 2.2.6-4build1 amd64 [installed,local]
libde265-0/now 1.0.15-1build3 amd64 [installed,local]
libdebconfclient0/now 0.271ubuntu3 amd64 [installed,local]
libdecor-0-0/now 0.2.2-1build2 amd64 [installed,local]
libdeflate0/now 1.19-1build1.1 amd64 [installed,local]
libdpkg-perl/now 1.22.6ubuntu6.1 all [installed,local]
libdrm-amdgpu1/now 2.4.122-1~ubuntu0.24.04.1 amd64 [installed,local]
libdrm-common/now 2.4.122-1~ubuntu0.24.04.1 all [installed,local]
libdrm-intel1/now 2.4.122-1~ubuntu0.24.04.1 amd64 [installed,local]
libdrm-radeon1/now 2.4.122-1~ubuntu0.24.04.1 amd64 [installed,local]
libdrm2/now 2.4.122-1~ubuntu0.24.04.1 amd64 [installed,local]
libedit2/now 3.1-20230828-1build1 amd64 [installed,local]
libelf1t64/now 0.190-1.1ubuntu0.1 amd64 [installed,local]
liberror-perl/now 0.17029-2 all [installed,local]
libexpat1/now 2.6.1-2ubuntu0.3 amd64 [installed,local]
libext2fs2t64/now 1.47.0-2.4~exp1ubuntu4.1 amd64 [installed,local]
libffi8/now 3.4.6-1build1 amd64 [installed,local]
libfftw3-double3/now 3.3.10-1ubuntu3 amd64 [installed,local]
libfido2-1/now 1.14.0-1build3 amd64 [installed,local]
libflac12t64/now 1.4.3+ds-2.1ubuntu2 amd64 [installed,local]
libflite1/now 2.2-6build3 amd64 [installed,local]
libfontbox-java/now 1:1.8.16-5 all [installed,local]
libfontconfig1/now 2.15.0-1.1ubuntu2 amd64 [installed,local]
libfontenc1/now 1:1.1.8-1build1 amd64 [installed,local]
libfreetype6/now 2.13.2+dfsg-1build3 amd64 [installed,local]
libfribidi0/now 1.0.13-3build1 amd64 [installed,local]
libgbm1/now 24.2.8-1ubuntu1~24.04.1 amd64 [installed,local]
libgcc-13-dev/now 13.3.0-6ubuntu2~24.04 amd64 [installed,local]
libgcc-s1/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
libgcrypt20/now 1.10.3-2build1 amd64 [installed,local]
libgd3/now 2.3.3-9ubuntu5 amd64 [installed,local]
libgdbm-compat4t64/now 1.23-5.1build1 amd64 [installed,local]
libgdbm6t64/now 1.23-5.1build1 amd64 [installed,local]
libgdk-pixbuf-2.0-0/now 2.42.10+dfsg-3ubuntu3.2 amd64 [installed,local]
libgdk-pixbuf2.0-common/now 2.42.10+dfsg-3ubuntu3.2 all [installed,local]
libgfortran-13-dev/now 13.3.0-6ubuntu2~24.04 amd64 [installed,local]
libgfortran5/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
libgl1-mesa-dri/now 24.2.8-1ubuntu1~24.04.1 amd64 [installed,local]
libgl1/now 1.7.0-1build1 amd64 [installed,local]
libglapi-mesa/now 24.2.8-1ubuntu1~24.04.1 amd64 [installed,local]
libglib2.0-0t64/now 2.80.0-6ubuntu3.4 amd64 [installed,local]
libglvnd0/now 1.7.0-1build1 amd64 [installed,local]
libglx-mesa0/now 24.2.8-1ubuntu1~24.04.1 amd64 [installed,local]
libglx0/now 1.7.0-1build1 amd64 [installed,local]
libgme0/now 0.6.3-7build1 amd64 [installed,local]
libgmp10/now 2:6.3.0+dfsg-2ubuntu6.1 amd64 [installed,local]
libgnutls30t64/now 3.8.3-1.1ubuntu3.4 amd64 [installed,local]
libgomp1/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
libgpg-error0/now 1.47-3build2.1 amd64 [installed,local]
libgprofng0/now 2.42-4ubuntu2.5 amd64 [installed,local]
libgraphite2-3/now 1.3.14-2build1 amd64 [installed,local]
libgs-common/now 10.02.1~dfsg1-0ubuntu7.7 all [installed,local]
libgs10-common/now 10.02.1~dfsg1-0ubuntu7.7 all [installed,local]
libgs10/now 10.02.1~dfsg1-0ubuntu7.7 amd64 [installed,local]
libgsm1/now 1.0.22-1build1 amd64 [installed,local]
libgssapi-krb5-2/now 1.20.1-6ubuntu2.6 amd64 [installed,local]
libharfbuzz0b/now 8.3.0-2build2 amd64 [installed,local]
libheif-plugin-aomdec/now 1.17.6-1ubuntu4.1 amd64 [installed,local]
libheif-plugin-libde265/now 1.17.6-1ubuntu4.1 amd64 [installed,local]
libheif1/now 1.17.6-1ubuntu4.1 amd64 [installed,local]
libhogweed6t64/now 3.9.1-2.2build1.1 amd64 [installed,local]
libhwasan0/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
libhwy1t64/now 1.0.7-8.1build1 amd64 [installed,local]
libice6/now 2:1.0.10-1build3 amd64 [installed,local]
libicu74/now 74.2-1ubuntu3.1 amd64 [installed,local]
libidn12/now 1.42-1build1 amd64 [installed,local]
libidn2-0/now 2.3.7-2build1.1 amd64 [installed,local]
libiec61883-0/now 1.2.0-6build1 amd64 [installed,local]
libijs-0.35/now 0.35-15.1build1 amd64 [installed,local]
libisl23/now 0.26-3build1.1 amd64 [installed,local]
libitm1/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
libjack-jackd2-0/now 1.9.21~dfsg-3ubuntu3 amd64 [installed,local]
libjansson4/now 2.14-2build2 amd64 [installed,local]
libjbig0/now 2.1-6.1ubuntu2 amd64 [installed,local]
libjbig2dec0/now 0.20-1build3 amd64 [installed,local]
libjpeg-turbo8/now 2.1.5-2ubuntu2 amd64 [installed,local]
libjpeg8/now 8c-2ubuntu11 amd64 [installed,local]
libjxl0.7/now 0.7.0-10.2ubuntu6.1 amd64 [installed,local]
libk5crypto3/now 1.20.1-6ubuntu2.6 amd64 [installed,local]
libkeyutils1/now 1.6.3-3build1 amd64 [installed,local]
libkpathsea6/now 2023.20230311.66589-9build3 amd64 [installed,local]
libkrb5-3/now 1.20.1-6ubuntu2.6 amd64 [installed,local]
libkrb5support0/now 1.20.1-6ubuntu2.6 amd64 [installed,local]
liblapack3/now 3.12.0-3build1.1 amd64 [installed,local]
liblcms2-2/now 2.14-2build1 amd64 [installed,local]
libldap2/now 2.6.7+dfsg-1~exp1ubuntu8.2 amd64 [installed,local]
liblerc4/now 4.0.0+ds-4ubuntu2 amd64 [installed,local]
liblilv-0-0/now 0.24.22-1build1 amd64 [installed,local]
libllvm19/now 1:19.1.1-1ubuntu1~24.04.2 amd64 [installed,local]
liblsan0/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
liblua5.4-0/now 5.4.6-3build2 amd64 [installed,local]
liblz4-1/now 1.9.4-1build1.1 amd64 [installed,local]
liblzma5/now 5.6.1+really5.4.5-1ubuntu0.2 amd64 [installed,local]
libmbedcrypto7t64/now 2.28.8-1 amd64 [installed,local]
libmd0/now 1.1.0-2build1.1 amd64 [installed,local]
libmount1/now 2.39.3-9ubuntu6.3 amd64 [installed,local]
libmp3lame0/now 3.100-6build1 amd64 [installed,local]
libmpc3/now 1.3.1-1build1.1 amd64 [installed,local]
libmpfr6/now 4.2.1-1build1.1 amd64 [installed,local]
libmpg123-0t64/now 1.32.5-1ubuntu1.1 amd64 [installed,local]
libmysofa1/now 1.3.2+dfsg-2ubuntu2 amd64 [installed,local]
libncursesw6/now 6.4+20240113-1ubuntu2 amd64 [installed,local]
libnettle8t64/now 3.9.1-2.2build1.1 amd64 [installed,local]
libnghttp2-14/now 1.59.0-1ubuntu0.2 amd64 [installed,local]
libnorm1t64/now 1.5.9+dfsg-3.1build1 amd64 [installed,local]
libnpth0t64/now 1.6-3.1build1 amd64 [installed,local]
libnuma1/now 2.0.18-1build1 amd64 [installed,local]
libogg0/now 1.3.5-3build1 amd64 [installed,local]
libopenal-data/now 1:1.23.1-4build1 all [installed,local]
libopenal1/now 1:1.23.1-4build1 amd64 [installed,local]
libopenjp2-7/now 2.5.0-2ubuntu0.3 amd64 [installed,local]
libopenmpt0t64/now 0.7.3-1.1build3 amd64 [installed,local]
libopus0/now 1.4-1build1 amd64 [installed,local]
libp11-kit0/now 0.25.3-4ubuntu2.1 amd64 [installed,local]
libpam-modules-bin/now 1.5.3-5ubuntu5.4 amd64 [installed,local]
libpam-modules/now 1.5.3-5ubuntu5.4 amd64 [installed,local]
libpam-runtime/now 1.5.3-5ubuntu5.4 all [installed,local]
libpam0g/now 1.5.3-5ubuntu5.4 amd64 [installed,local]
libpango-1.0-0/now 1.52.1+ds-1build1 amd64 [installed,local]
libpangocairo-1.0-0/now 1.52.1+ds-1build1 amd64 [installed,local]
libpangoft2-1.0-0/now 1.52.1+ds-1build1 amd64 [installed,local]
libpaper-utils/now 1.1.29build1 amd64 [installed,local]
libpaper1/now 1.1.29build1 amd64 [installed,local]
libpciaccess0/now 0.17-3ubuntu0.24.04.2 amd64 [installed,local]
libpcre2-8-0/now 10.42-4ubuntu2.1 amd64 [installed,local]
libpdfbox-java/now 1:1.8.16-5 all [installed,local]
libperl5.38t64/now 5.38.2-3.2ubuntu0.2 amd64 [installed,local]
libpgm-5.3-0t64/now 5.3.128~dfsg-2.1build1 amd64 [installed,local]
libpixman-1-0/now 0.42.2-1build1 amd64 [installed,local]
libplacebo338/now 6.338.2-2build1 amd64 [installed,local]
libpng16-16t64/now 1.6.43-5build1 amd64 [installed,local]
libpocketsphinx3/now 0.8.0+real5prealpha+1-15ubuntu5 amd64 [installed,local]
libpostproc57/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libpotrace0/now 1.16-2build1 amd64 [installed,local]
libproc2-0/now 2:4.0.4-4ubuntu3.2 amd64 [installed,local]
libpsl5t64/now 0.21.2-1.1build1 amd64 [installed,local]
libptexenc1/now 2023.20230311.66589-9build3 amd64 [installed,local]
libpulse0/now 1:16.1+dfsg1-2ubuntu10.1 amd64 [installed,local]
libpython3-stdlib/now 3.12.3-0ubuntu2 amd64 [installed,local]
libpython3.12-minimal/now 3.12.3-1ubuntu0.7 amd64 [installed,local]
libpython3.12-stdlib/now 3.12.3-1ubuntu0.7 amd64 [installed,local]
libquadmath0/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
librabbitmq4/now 0.11.0-1build2 amd64 [installed,local]
librav1e0/now 0.7.1-2 amd64 [installed,local]
libraw1394-11/now 2.1.2-2build3 amd64 [installed,local]
libreadline8t64/now 8.2-4build1 amd64 [installed,local]
librist4/now 0.2.10+dfsg-2 amd64 [installed,local]
librsvg2-2/now 2.58.0+dfsg-1build1 amd64 [installed,local]
librtmp1/now 2.4+20151223.gitfa8646d.1-2build7 amd64 [installed,local]
librubberband2/now 3.3.0+dfsg-2build1 amd64 [installed,local]
libsamplerate0/now 0.2.2-4build1 amd64 [installed,local]
libsasl2-2/now 2.1.28+dfsg1-5ubuntu3.1 amd64 [installed,local]
libsasl2-modules-db/now 2.1.28+dfsg1-5ubuntu3.1 amd64 [installed,local]
libsdl2-2.0-0/now 2.30.0+dfsg-1ubuntu3.1 amd64 [installed,local]
libseccomp2/now 2.5.5-1ubuntu3.1 amd64 [installed,local]
libselinux1/now 3.5-2ubuntu2.1 amd64 [installed,local]
libsemanage-common/now 3.5-1build5 all [installed,local]
libsemanage2/now 3.5-1build5 amd64 [installed,local]
libsensors-config/now 1:3.6.0-9build1 all [installed,local]
libsensors5/now 1:3.6.0-9build1 amd64 [installed,local]
libsepol2/now 3.5-2build1 amd64 [installed,local]
libserd-0-0/now 0.32.2-1 amd64 [installed,local]
libsframe1/now 2.42-4ubuntu2.5 amd64 [installed,local]
libsharpyuv0/now 1.3.2-0.4build3 amd64 [installed,local]
libshine3/now 3.1.1-2build1 amd64 [installed,local]
libslang2/now 2.3.3-3build2 amd64 [installed,local]
libsm6/now 2:1.2.3-1build3 amd64 [installed,local]
libsmartcols1/now 2.39.3-9ubuntu6.3 amd64 [installed,local]
libsnappy1v5/now 1.1.10-1build1 amd64 [installed,local]
libsndfile1/now 1.2.2-1ubuntu5.24.04.1 amd64 [installed,local]
libsndio7.0/now 1.9.0-0.3build3 amd64 [installed,local]
libsodium23/now 1.0.18-1build3 amd64 [installed,local]
libsord-0-0/now 0.16.16-2build1 amd64 [installed,local]
libsoxr0/now 0.1.3-4build3 amd64 [installed,local]
libspeex1/now 1.2.1-2ubuntu2.24.04.1 amd64 [installed,local]
libsphinxbase3t64/now 0.8+5prealpha+1-17build2 amd64 [installed,local]
libsqlite3-0/now 3.45.1-1ubuntu2.4 amd64 [installed,local]
libsratom-0-0/now 0.6.16-1build1 amd64 [installed,local]
libsrt1.5-gnutls/now 1.5.3-1build2 amd64 [installed,local]
libss2/now 1.47.0-2.4~exp1ubuntu4.1 amd64 [installed,local]
libssh-4/now 0.10.6-2ubuntu0.1 amd64 [installed,local]
libssh-gcrypt-4/now 0.10.6-2ubuntu0.1 amd64 [installed,local]
libssl3t64/now 3.0.13-0ubuntu3.5 amd64 [installed,local]
libstdc++-13-dev/now 13.3.0-6ubuntu2~24.04 amd64 [installed,local]
libstdc++6/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
libsvtav1enc1d1/now 1.7.0+dfsg-2build1 amd64 [installed,local]
libswresample4/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libswscale7/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libsynctex2/now 2023.20230311.66589-9build3 amd64 [installed,local]
libsystemd0/now 255.4-1ubuntu8.10 amd64 [installed,local]
libtasn1-6/now 4.19.0-3ubuntu0.24.04.1 amd64 [installed,local]
libteckit0/now 2.5.12+ds1-1 amd64 [installed,local]
libtexlua53-5/now 2023.20230311.66589-9build3 amd64 [installed,local]
libthai-data/now 0.1.29-2build1 all [installed,local]
libthai0/now 0.1.29-2build1 amd64 [installed,local]
libtheora0/now 1.1.1+dfsg.1-16.1build3 amd64 [installed,local]
libtiff6/now 4.5.1+git230720-4ubuntu2.2 amd64 [installed,local]
libtinfo6/now 6.4+20240113-1ubuntu2 amd64 [installed,local]
libtsan2/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
libtwolame0/now 0.4.0-2build3 amd64 [installed,local]
libubsan1/now 14.2.0-4ubuntu2~24.04 amd64 [installed,local]
libudev1/now 255.4-1ubuntu8.10 amd64 [installed,local]
libudfread0/now 1.1.2-1build1 amd64 [installed,local]
libunibreak5/now 5.1-2build1 amd64 [installed,local]
libunistring5/now 1.1-2build1.1 amd64 [installed,local]
libusb-1.0-0/now 2:1.0.27-1 amd64 [installed,local]
libuuid1/now 2.39.3-9ubuntu6.3 amd64 [installed,local]
libva-drm2/now 2.20.0-2build1 amd64 [installed,local]
libva-x11-2/now 2.20.0-2build1 amd64 [installed,local]
libva2/now 2.20.0-2build1 amd64 [installed,local]
libvdpau1/now 1.5-2build1 amd64 [installed,local]
libvidstab1.1/now 1.1.0-2build1 amd64 [installed,local]
libvorbis0a/now 1.3.7-1build3 amd64 [installed,local]
libvorbisenc2/now 1.3.7-1build3 amd64 [installed,local]
libvorbisfile3/now 1.3.7-1build3 amd64 [installed,local]
libvpl2/now 2023.3.0-1build1 amd64 [installed,local]
libvpx9/now 1.14.0-1ubuntu2.2 amd64 [installed,local]
libvulkan1/now 1.3.275.0-1build1 amd64 [installed,local]
libwayland-client0/now 1.22.0-2.1build1 amd64 [installed,local]
libwayland-cursor0/now 1.22.0-2.1build1 amd64 [installed,local]
libwayland-egl1/now 1.22.0-2.1build1 amd64 [installed,local]
libwayland-server0/now 1.22.0-2.1build1 amd64 [installed,local]
libwebp7/now 1.3.2-0.4build3 amd64 [installed,local]
libwebpmux3/now 1.3.2-0.4build3 amd64 [installed,local]
libx11-6/now 2:1.8.7-1build1 amd64 [installed,local]
libx11-data/now 2:1.8.7-1build1 all [installed,local]
libx11-xcb1/now 2:1.8.7-1build1 amd64 [installed,local]
libx264-164/now 2:0.164.3108+git31e19f9-1 amd64 [installed,local]
libx265-199/now 3.5-2build1 amd64 [installed,local]
libxau6/now 1:1.0.9-1build6 amd64 [installed,local]
libxaw7/now 2:1.0.14-1build2 amd64 [installed,local]
libxcb-dri2-0/now 1.15-1ubuntu2 amd64 [installed,local]
libxcb-dri3-0/now 1.15-1ubuntu2 amd64 [installed,local]
libxcb-glx0/now 1.15-1ubuntu2 amd64 [installed,local]
libxcb-present0/now 1.15-1ubuntu2 amd64 [installed,local]
libxcb-randr0/now 1.15-1ubuntu2 amd64 [installed,local]
libxcb-render0/now 1.15-1ubuntu2 amd64 [installed,local]
libxcb-shape0/now 1.15-1ubuntu2 amd64 [installed,local]
libxcb-shm0/now 1.15-1ubuntu2 amd64 [installed,local]
libxcb-sync1/now 1.15-1ubuntu2 amd64 [installed,local]
libxcb-xfixes0/now 1.15-1ubuntu2 amd64 [installed,local]
libxcb1/now 1.15-1ubuntu2 amd64 [installed,local]
libxcursor1/now 1:1.2.1-1build1 amd64 [installed,local]
libxdmcp6/now 1:1.1.3-0ubuntu6 amd64 [installed,local]
libxext6/now 2:1.3.4-1build2 amd64 [installed,local]
libxfixes3/now 1:6.0.0-2build1 amd64 [installed,local]
libxi6/now 2:1.8.1-1build1 amd64 [installed,local]
libxkbcommon0/now 1.6.0-1build1 amd64 [installed,local]
libxml2/now 2.9.14+dfsg-1.3ubuntu3.3 amd64 [installed,local]
libxmu6/now 2:1.1.3-3build2 amd64 [installed,local]
libxpm4/now 1:3.5.17-1build2 amd64 [installed,local]
libxrandr2/now 2:1.5.2-2build1 amd64 [installed,local]
libxrender1/now 1:0.9.10-1.1build1 amd64 [installed,local]
libxshmfence1/now 1.3-1build5 amd64 [installed,local]
libxss1/now 1:1.2.3-1build3 amd64 [installed,local]
libxt6t64/now 1:1.2.1-1.2build1 amd64 [installed,local]
libxv1/now 2:1.0.11-1.1build1 amd64 [installed,local]
libxvidcore4/now 2:1.3.7-1build1 amd64 [installed,local]
libxxf86vm1/now 1:1.1.4-1build4 amd64 [installed,local]
libxxhash0/now 0.8.2-2build1 amd64 [installed,local]
libyaml-0-2/now 0.2.5-1build1 amd64 [installed,local]
libzimg2/now 3.0.5+ds1-1build1 amd64 [installed,local]
libzix-0-0/now 0.4.2-2build1 amd64 [installed,local]
libzmq5/now 4.3.5-1build2 amd64 [installed,local]
libzstd1/now 1.5.5+dfsg2-2build1.1 amd64 [installed,local]
libzvbi-common/now 0.2.42-2 all [installed,local]
libzvbi0t64/now 0.2.42-2 amd64 [installed,local]
libzzip-0-13t64/now 0.13.72+dfsg.1-1.2build1 amd64 [installed,local]
linux-libc-dev/now 6.8.0-71.71 amd64 [installed,local]
locales/now 2.39-0ubuntu8.5 all [installed,local]
login/now 1:4.13+dfsg1-4ubuntu3.2 amd64 [installed,local]
logsave/now 1.47.0-2.4~exp1ubuntu4.1 amd64 [installed,local]
lto-disabled-list/now 47 all [installed,local]
make/now 4.3-4.1build2 amd64 [installed,local]
mawk/now 1.3.4.20240123-1build1 amd64 [installed,local]
media-types/now 10.1.0 all [installed,local]
mesa-libgallium/now 24.2.8-1ubuntu1~24.04.1 amd64 [installed,local]
mount/now 2.39.3-9ubuntu6.3 amd64 [installed,local]
nano-tiny/now 7.2-2ubuntu0.1 amd64 [installed,local]
ncurses-base/now 6.4+20240113-1ubuntu2 all [installed,local]
ncurses-bin/now 6.4+20240113-1ubuntu2 amd64 [installed,local]
netbase/now 6.4 all [installed,local]
ocl-icd-libopencl1/now 2.3.2-1build1 amd64 [installed,local]
openssh-client/now 1:9.6p1-3ubuntu13.13 amd64 [installed,local]
openssl/now 3.0.13-0ubuntu3.5 amd64 [installed,local]
pandoc-data/now 3.1.3-1 all [installed,local]
pandoc/now 3.1.3+ds-2 amd64 [installed,local]
passwd/now 1:4.13+dfsg1-4ubuntu3.2 amd64 [installed,local]
patch/now 2.7.6-7build3 amd64 [installed,local]
perl-base/now 5.38.2-3.2ubuntu0.2 amd64 [installed,local]
perl-modules-5.38/now 5.38.2-3.2ubuntu0.2 all [installed,local]
perl/now 5.38.2-3.2ubuntu0.2 amd64 [installed,local]
pfb2t1c2pfb/now 0.3-11build1 amd64 [installed,local]
poppler-data/now 0.4.12-1 all [installed,local]
preview-latex-style/now 13.2-1 all [installed,local]
procps/now 2:4.0.4-4ubuntu3.2 amd64 [installed,local]
python3-minimal/now 3.12.3-0ubuntu2 amd64 [installed,local]
python3.12-minimal/now 3.12.3-1ubuntu0.7 amd64 [installed,local]
python3.12/now 3.12.3-1ubuntu0.7 amd64 [installed,local]
python3/now 3.12.3-0ubuntu2 amd64 [installed,local]
readline-common/now 8.2-4build1 all [installed,local]
rpcsvc-proto/now 1.4.2-0ubuntu7 amd64 [installed,local]
run-one/now 1.17-0ubuntu2 all [installed,local]
sed/now 4.9-2build1 amd64 [installed,local]
sensible-utils/now 0.0.22 all [installed,local]
shared-mime-info/now 2.4-4 amd64 [installed,local]
sudo/now 1.9.15p5-3ubuntu5.24.04.1 amd64 [installed,local]
sysvinit-utils/now 3.08-6ubuntu3 amd64 [installed,local]
t1utils/now 1.41-4build3 amd64 [installed,local]
tar/now 1.35+dfsg-3build1 amd64 [installed,local]
teckit/now 2.5.12+ds1-1 amd64 [installed,local]
tex-common/now 6.18 all [installed,local]
texlive-base/now 2023.20240207-1 all [installed,local]
texlive-binaries/now 2023.20230311.66589-9build3 amd64 [installed,local]
texlive-fonts-recommended/now 2023.20240207-1 all [installed,local]
texlive-latex-base/now 2023.20240207-1 all [installed,local]
texlive-latex-extra/now 2023.20240207-1 all [installed,local]
texlive-latex-recommended/now 2023.20240207-1 all [installed,local]
texlive-pictures/now 2023.20240207-1 all [installed,local]
texlive-plain-generic/now 2023.20240207-1 all [installed,local]
texlive-xetex/now 2023.20240207-1 all [installed,local]
tini/now 0.19.0-1 amd64 [installed,local]
tipa/now 2:1.3-21 all [installed,local]
tzdata/now 2025b-0ubuntu0.24.04.1 all [installed,local]
ubuntu-keyring/now 2023.11.28.1 all [installed,local]
ucf/now 3.0043+nmu1 all [installed,local]
unminimize/now 0.2.1 amd64 [installed,local]
unzip/now 6.0-28ubuntu4.1 amd64 [installed,local]
util-linux/now 2.39.3-9ubuntu6.3 amd64 [installed,local]
vim-common/now 2:9.1.0016-1ubuntu7.8 all [installed,local]
vim-tiny/now 2:9.1.0016-1ubuntu7.8 amd64 [installed,local]
wget/now 1.21.4-1ubuntu4.1 amd64 [installed,local]
x11-common/now 1:7.7+23ubuntu3 all [installed,local]
xclip/now 0.13-3 amd64 [installed,local]
xdg-utils/now 1.1.3-4.1ubuntu3 all [installed,local]
xfonts-encodings/now 1:1.0.5-0ubuntu2 all [installed,local]
xfonts-utils/now 1:7.7+6build3 amd64 [installed,local]
xkb-data/now 2.41-2ubuntu1.1 all [installed,local]
xz-utils/now 5.6.1+really5.4.5-1ubuntu0.2 amd64 [installed,local]
zlib1g/now 1:1.3.dfsg-3.1ubuntu2.1 amd64 [installed,local]
R --version:
R version 4.4.3 (2025-02-28) -- "Trophy Case"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-conda-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under the terms of the
GNU General Public License versions 2 or 3.
For more information about these matters see
https://www.gnu.org/licenses/.
R --silent -e 'installed.packages(.Library)[, c(1,3)]':
> installed.packages(.Library)[, c(1,3)]
Package Version
abind "abind" "1.4-5"
anndata "anndata" "0.7.5.6"
askpass "askpass" "1.2.1"
assertthat "assertthat" "0.2.1"
assorthead "assorthead" "1.0.0"
backports "backports" "1.5.0"
base "base" "4.4.3"
base64enc "base64enc" "0.1-3"
basilisk "basilisk" "1.18.0"
basilisk.utils "basilisk.utils" "1.18.0"
beachmat "beachmat" "2.22.0"
beeswarm "beeswarm" "0.4.0"
BH "BH" "1.87.0-1"
Biobase "Biobase" "2.66.0"
BiocGenerics "BiocGenerics" "0.52.0"
BiocIO "BiocIO" "1.16.0"
BiocManager "BiocManager" "1.30.26"
BiocNeighbors "BiocNeighbors" "2.0.0"
BiocParallel "BiocParallel" "1.40.0"
BiocSingular "BiocSingular" "1.22.0"
biocViews "biocViews" "1.74.0"
bit "bit" "4.6.0"
bit64 "bit64" "4.6.0-1"
bitops "bitops" "1.0-9"
blob "blob" "1.2.4"
bluster "bluster" "1.16.0"
boot "boot" "1.3-31"
brew "brew" "1.0-10"
brio "brio" "1.1.5"
broom "broom" "1.0.9"
broom.helpers "broom.helpers" "1.21.0"
bslib "bslib" "0.9.0"
cachem "cachem" "1.1.0"
Cairo "Cairo" "1.6-2"
callr "callr" "3.7.6"
car "car" "3.1-3"
carData "carData" "3.0-5"
cards "cards" "0.6.1"
caret "caret" "6.0-94"
caTools "caTools" "1.18.3"
cellranger "cellranger" "1.1.0"
circlize "circlize" "0.4.16"
class "class" "7.3-23"
cli "cli" "3.6.5"
clipr "clipr" "0.8.0"
clock "clock" "0.7.3"
clue "clue" "0.3-66"
cluster "cluster" "2.1.8.1"
codetools "codetools" "0.2-20"
collections "collections" "0.3.8"
colorspace "colorspace" "2.1-1"
combinat "combinat" "0.0-8"
commonmark "commonmark" "2.0.0"
compiler "compiler" "4.4.3"
ComplexHeatmap "ComplexHeatmap" "2.22.0"
conflicted "conflicted" "1.2.0"
conquer "conquer" "1.3.3"
corrplot "corrplot" "0.95"
cowplot "cowplot" "1.2.0"
cpp11 "cpp11" "0.5.2"
crayon "crayon" "1.5.3"
credentials "credentials" "2.0.2"
crosstalk "crosstalk" "1.2.1"
curl "curl" "6.4.0"
cyclocomp "cyclocomp" "1.1.1"
data.table "data.table" "1.17.8"
datasets "datasets" "4.4.3"
DBI "DBI" "1.2.3"
dbplyr "dbplyr" "2.5.0"
DDRTree "DDRTree" "0.1.5"
DelayedArray "DelayedArray" "0.32.0"
deldir "deldir" "2.0-4"
Deriv "Deriv" "4.2.0"
desc "desc" "1.4.3"
DESeq2 "DESeq2" "1.46.0"
devtools "devtools" "2.4.5"
diagram "diagram" "1.6.5"
dials "dials" "1.4.1"
DiceDesign "DiceDesign" "1.10"
dichromat "dichromat" "2.0-0.1"
diffobj "diffobj" "0.3.6"
digest "digest" "0.6.37"
dir.expiry "dir.expiry" "1.14.0"
doBy "doBy" "4.7.0"
doFuture "doFuture" "1.1.2"
doParallel "doParallel" "1.0.17"
dotCall64 "dotCall64" "1.2"
downlit "downlit" "0.4.4"
dplyr "dplyr" "1.1.4"
dqrng "dqrng" "0.3.2"
dtplyr "dtplyr" "1.3.1"
e1071 "e1071" "1.7-16"
edgeR "edgeR" "4.4.0"
ellipsis "ellipsis" "0.3.2"
evaluate "evaluate" "1.0.4"
fansi "fansi" "1.0.6"
farver "farver" "2.1.2"
fastcluster "fastcluster" "1.3.0"
fastDummies "fastDummies" "1.7.5"
fastICA "fastICA" "1.2-7"
fastmap "fastmap" "1.2.0"
fastmatch "fastmatch" "1.1-6"
fgsea "fgsea" "1.32.2"
filelock "filelock" "1.0.3"
fitdistrplus "fitdistrplus" "1.2-4"
FNN "FNN" "1.1.4.1"
fontawesome "fontawesome" "0.5.3"
forcats "forcats" "1.0.0"
foreach "foreach" "1.5.2"
forecast "forecast" "8.24.0"
formatR "formatR" "1.14"
Formula "Formula" "1.2-5"
fracdiff "fracdiff" "1.5-3"
fs "fs" "1.6.6"
furrr "furrr" "0.3.1"
futile.logger "futile.logger" "1.4.3"
futile.options "futile.options" "1.0.1"
future "future" "1.67.0"
future.apply "future.apply" "1.20.0"
gameofthrones "gameofthrones" "1.0.2"
gargle "gargle" "1.5.2"
gbRd "gbRd" "0.4.12"
generics "generics" "0.1.4"
GenomeInfoDb "GenomeInfoDb" "1.42.0"
GenomeInfoDbData "GenomeInfoDbData" "1.2.13"
GenomicRanges "GenomicRanges" "1.58.0"
gert "gert" "2.1.4"
GetoptLong "GetoptLong" "1.0.5"
GGally "GGally" "2.3.0"
ggbeeswarm "ggbeeswarm" "0.7.2"
ggforce "ggforce" "0.5.0"
ggplot2 "ggplot2" "3.5.2"
ggpubr "ggpubr" "0.6.1"
ggraph "ggraph" "2.2.1"
ggrastr "ggrastr" "1.0.2"
ggrepel "ggrepel" "0.9.6"
ggridges "ggridges" "0.5.6"
ggsci "ggsci" "3.2.0"
ggsignif "ggsignif" "0.6.4"
ggstats "ggstats" "0.10.0"
ggthemes "ggthemes" "5.1.0"
gh "gh" "1.5.0"
gitcreds "gitcreds" "0.1.2"
GlobalOptions "GlobalOptions" "0.1.2"
globals "globals" "0.18.0"
glue "glue" "1.8.0"
goftest "goftest" "1.2-3"
googledrive "googledrive" "2.1.1"
googlesheets4 "googlesheets4" "1.1.1"
gower "gower" "1.0.1"
GPfit "GPfit" "1.0-9"
gplots "gplots" "3.2.0"
graph "graph" "1.84.0"
graphics "graphics" "4.4.3"
graphlayouts "graphlayouts" "1.2.2"
grDevices "grDevices" "4.4.3"
grid "grid" "4.4.3"
gridExtra "gridExtra" "2.3"
gtable "gtable" "0.3.6"
gtools "gtools" "3.9.5"
hardhat "hardhat" "1.4.1"
harrypotter "harrypotter" "2.1.1"
haven "haven" "2.5.4"
HDF5Array "HDF5Array" "1.34.0"
here "here" "1.0.1"
hexbin "hexbin" "1.28.5"
highr "highr" "0.11"
hms "hms" "1.1.3"
HSMMSingleCell "HSMMSingleCell" "1.26.0"
htmltools "htmltools" "0.5.8.1"
htmlwidgets "htmlwidgets" "1.6.4"
httpuv "httpuv" "1.6.15"
httr "httr" "1.4.7"
httr2 "httr2" "1.2.1"
ica "ica" "1.0-3"
ids "ids" "1.0.1"
igraph "igraph" "2.0.3"
infer "infer" "1.0.9"
ini "ini" "0.3.1"
ipred "ipred" "0.9-15"
IRanges "IRanges" "2.40.0"
IRdisplay "IRdisplay" "1.1"
IRkernel "IRkernel" "1.3.2"
irlba "irlba" "2.3.5.1"
isoband "isoband" "0.2.7"
iterators "iterators" "1.0.14"
jcolors "jcolors" "0.0.5"
jquerylib "jquerylib" "0.1.4"
jsonlite "jsonlite" "2.0.0"
KernSmooth "KernSmooth" "2.23-26"
knitr "knitr" "1.50"
labeling "labeling" "0.4.3"
labelled "labelled" "2.14.1"
lambda.r "lambda.r" "1.2.4"
languageserver "languageserver" "0.3.16"
later "later" "1.4.2"
lattice "lattice" "0.22-7"
lava "lava" "1.8.1"
lazyeval "lazyeval" "0.2.2"
leidenbase "leidenbase" "0.1.32"
lhs "lhs" "1.2.0"
lifecycle "lifecycle" "1.0.4"
limma "limma" "3.62.1"
lintr "lintr" "3.2.0"
listenv "listenv" "0.9.1"
lme4 "lme4" "1.1-37"
lmtest "lmtest" "0.9-40"
locfit "locfit" "1.5-9.12"
LoomExperiment "LoomExperiment" "1.24.0"
lubridate "lubridate" "1.9.4"
magrittr "magrittr" "2.0.3"
mapproj "mapproj" "1.2.12"
maps "maps" "3.4.3"
MASS "MASS" "7.3-64"
MAST "MAST" "1.32.0"
Matrix "Matrix" "1.7-3"
MatrixGenerics "MatrixGenerics" "1.18.0"
MatrixModels "MatrixModels" "0.5-4"
matrixStats "matrixStats" "1.5.0"
memoise "memoise" "2.0.1"
metapod "metapod" "1.14.0"
methods "methods" "4.4.3"
mgcv "mgcv" "1.9-3"
microbenchmark "microbenchmark" "1.5.0"
miloR "miloR" "2.2.0"
mime "mime" "0.13"
miniUI "miniUI" "0.1.2"
minqa "minqa" "1.2.8"
modeldata "modeldata" "1.5.0"
modelenv "modelenv" "0.2.0"
ModelMetrics "ModelMetrics" "1.2.2.2"
modelr "modelr" "0.1.11"
monocle "monocle" "2.34.0"
munsell "munsell" "0.5.1"
nlme "nlme" "3.1-168"
nloptr "nloptr" "2.2.1"
nnet "nnet" "7.3-20"
numDeriv "numDeriv" "2016.8-1.1"
nycflights13 "nycflights13" "1.0.2"
oompaBase "oompaBase" "3.2.10"
openssl "openssl" "2.3.3"
paletteer "paletteer" "1.6.0"
palr "palr" "0.4.0"
pals "pals" "1.10"
parallel "parallel" "4.4.3"
parallelDist "parallelDist" "0.2.6"
parallelly "parallelly" "1.45.1"
parsnip "parsnip" "1.3.2"
patchwork "patchwork" "1.3.1"
pbapply "pbapply" "1.7-4"
pbdZMQ "pbdZMQ" "0.3-14"
pbkrtest "pbkrtest" "0.5.5"
pheatmap "pheatmap" "1.0.13"
pillar "pillar" "1.11.0"
pkgbuild "pkgbuild" "1.4.8"
pkgconfig "pkgconfig" "2.0.3"
pkgdown "pkgdown" "2.1.3"
pkgload "pkgload" "1.4.0"
plogr "plogr" "0.2.0"
plotly "plotly" "4.11.0"
plyr "plyr" "1.8.9"
png "png" "0.1-8"
polyclip "polyclip" "1.10-7"
polynom "polynom" "1.4-1"
pracma "pracma" "2.4.4"
praise "praise" "1.0.0"
prettyunits "prettyunits" "1.2.0"
prismatic "prismatic" "1.1.2"
pROC "pROC" "1.19.0.1"
processx "processx" "3.8.6"
prodlim "prodlim" "2025.04.28"
profvis "profvis" "0.4.0"
progress "progress" "1.2.3"
progressr "progressr" "0.15.1"
promises "promises" "1.3.2"
proxy "proxy" "0.4-27"
ps "ps" "1.9.1"
purrr "purrr" "1.1.0"
quadprog "quadprog" "1.5-8"
quantmod "quantmod" "0.4.28"
quantreg "quantreg" "6.00"
R.cache "R.cache" "0.17.0"
R.methodsS3 "R.methodsS3" "1.8.2"
R.oo "R.oo" "1.27.1"
R.utils "R.utils" "2.13.0"
R6 "R6" "2.6.1"
ragg "ragg" "1.4.0"
randomForest "randomForest" "4.7-1.2"
RANN "RANN" "2.6.2"
rappdirs "rappdirs" "0.3.3"
RBGL "RBGL" "1.82.0"
rbibutils "rbibutils" "2.3"
rcmdcheck "rcmdcheck" "1.4.0"
RColorBrewer "RColorBrewer" "1.1-3"
Rcpp "Rcpp" "1.1.0"
RcppAnnoy "RcppAnnoy" "0.0.22"
RcppArmadillo "RcppArmadillo" "14.6.0-1"
RcppEigen "RcppEigen" "0.3.4.0.2"
RcppHNSW "RcppHNSW" "0.6.0"
RcppML "RcppML" "0.3.7"
RcppParallel "RcppParallel" "5.1.9"
RcppProgress "RcppProgress" "0.4.2"
RcppTOML "RcppTOML" "0.2.3"
RCurl "RCurl" "1.98-1.16"
Rdpack "Rdpack" "2.6.4"
readr "readr" "2.1.5"
readxl "readxl" "1.4.5"
recipes "recipes" "1.3.1"
reformulas "reformulas" "0.4.1"
rematch "rematch" "2.0.0"
rematch2 "rematch2" "2.1.2"
remotes "remotes" "2.5.0"
repr "repr" "1.1.7"
reprex "reprex" "2.1.1"
reshape2 "reshape2" "1.4.4"
reticulate "reticulate" "1.43.0"
rex "rex" "1.2.1"
rgl "rgl" "1.3.24"
rhdf5 "rhdf5" "2.50.0"
rhdf5filters "rhdf5filters" "1.18.0"
Rhdf5lib "Rhdf5lib" "1.28.0"
rjson "rjson" "0.2.23"
rlang "rlang" "1.1.6"
rmarkdown "rmarkdown" "2.29"
ROCR "ROCR" "1.0-11"
RODBC "RODBC" "1.3-26"
roxygen2 "roxygen2" "7.3.2"
rpart "rpart" "4.1.24"
rprojroot "rprojroot" "2.1.0"
rsample "rsample" "1.3.1"
RSpectra "RSpectra" "0.16-2"
RSQLite "RSQLite" "2.4.2"
rstatix "rstatix" "0.7.2"
rstudioapi "rstudioapi" "0.17.1"
rsvd "rsvd" "1.0.5"
Rtsne "Rtsne" "0.17"
RUnit "RUnit" "0.4.33.1"
rversions "rversions" "2.1.2"
rvest "rvest" "1.0.4"
S4Arrays "S4Arrays" "1.6.0"
S4Vectors "S4Vectors" "0.44.0"
S7 "S7" "0.2.0"
sass "sass" "0.4.10"
ScaledMatrix "ScaledMatrix" "1.14.0"
scales "scales" "1.4.0"
scater "scater" "1.34.1"
scattermore "scattermore" "1.2"
sceasy "sceasy" "0.0.7"
scico "scico" "1.5.0"
scran "scran" "1.34.0"
sctransform "sctransform" "0.4.2"
scuttle "scuttle" "1.16.0"
selectr "selectr" "0.4-2"
sessioninfo "sessioninfo" "1.2.3"
Seurat "Seurat" "5.3.0"
SeuratObject "SeuratObject" "5.1.0"
sfd "sfd" "0.1.0"
shape "shape" "1.4.6.1"
shiny "shiny" "1.11.1"
SingleCellExperiment "SingleCellExperiment" "1.28.0"
sitmo "sitmo" "2.0.2"
slam "slam" "0.1-55"
slider "slider" "0.3.2"
snow "snow" "0.4-4"
sourcetools "sourcetools" "0.1.7-1"
sp "sp" "2.2-0"
spam "spam" "2.11-1"
SparseArray "SparseArray" "1.6.0"
SparseM "SparseM" "1.84-2"
sparsevctrs "sparsevctrs" "0.3.4"
spatstat.data "spatstat.data" "3.1-6"
spatstat.explore "spatstat.explore" "3.5-2"
spatstat.geom "spatstat.geom" "3.5-0"
spatstat.random "spatstat.random" "3.4-1"
spatstat.sparse "spatstat.sparse" "3.1-0"
spatstat.univar "spatstat.univar" "3.1-4"
spatstat.utils "spatstat.utils" "3.1-5"
splines "splines" "4.4.3"
SQUAREM "SQUAREM" "2021.1"
statmod "statmod" "1.5.0"
stats "stats" "4.4.3"
stats4 "stats4" "4.4.3"
stringi "stringi" "1.8.7"
stringr "stringr" "1.5.1"
styler "styler" "1.10.3"
SummarizedExperiment "SummarizedExperiment" "1.36.0"
survival "survival" "3.8-3"
sys "sys" "3.4.3"
systemfonts "systemfonts" "1.2.3"
tcltk "tcltk" "4.4.3"
tensor "tensor" "1.5.1"
testthat "testthat" "3.2.3"
textshaping "textshaping" "1.0.1"
tibble "tibble" "3.3.0"
tidygraph "tidygraph" "1.3.0"
tidymodels "tidymodels" "1.3.0"
tidyr "tidyr" "1.3.1"
tidyselect "tidyselect" "1.2.1"
tidyverse "tidyverse" "2.0.0"
timechange "timechange" "0.3.0"
timeDate "timeDate" "4041.110"
tinytex "tinytex" "0.57"
tools "tools" "4.4.3"
tseries "tseries" "0.10-58"
TTR "TTR" "0.24.4"
tune "tune" "1.3.0"
tweenr "tweenr" "2.0.3"
tzdb "tzdb" "0.5.0"
UCSC.utils "UCSC.utils" "1.2.0"
urca "urca" "1.3-4"
urlchecker "urlchecker" "1.0.1"
usethis "usethis" "3.1.0"
utf8 "utf8" "1.2.6"
utils "utils" "4.4.3"
uuid "uuid" "1.2-1"
uwot "uwot" "0.2.3"
vctrs "vctrs" "0.6.5"
VGAM "VGAM" "1.1-13"
vipor "vipor" "0.4.7"
viridis "viridis" "0.6.5"
viridisLite "viridisLite" "0.4.2"
vroom "vroom" "1.6.5"
waldo "waldo" "0.6.2"
warp "warp" "0.2.1"
whisker "whisker" "0.4.1"
withr "withr" "3.0.2"
workflows "workflows" "1.2.0"
workflowsets "workflowsets" "1.1.1"
writexl "writexl" "1.5.4"
xfun "xfun" "0.52"
XML "XML" "3.99-0.17"
xml2 "xml2" "1.3.8"
xmlparsedata "xmlparsedata" "1.0.5"
xopen "xopen" "1.0.1"
xtable "xtable" "1.8-4"
xts "xts" "0.14.1"
XVector "XVector" "0.46.0"
yaml "yaml" "2.3.10"
yardstick "yardstick" "1.3.2"
zellkonverter "zellkonverter" "1.16.0"
zip "zip" "2.3.3"
zlibbioc "zlibbioc" "1.52.0"
zoo "zoo" "1.8-14"
>
>
julia -E 'using InteractiveUtils; versioninfo()':
Julia Version 1.11.6
Commit 9615af0f269 (2025-07-09 12:58 UTC)
Build Info:
Official https://julialang.org/ release
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: 4 × AMD EPYC 7763 64-Core Processor
WORD_SIZE: 64
LLVM: libLLVM-16.0.6 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)
Environment:
JULIA_DEPOT_PATH = /opt/julia
JULIA_PKGDIR = /opt/julia
nothing
julia -E 'import Pkg; Pkg.status()':
Status `/opt/julia/environments/v1.11/Project.toml`
[f67ccb44] HDF5 v0.17.2
[7073ff75] IJulia v1.29.2
[c3e4b0f8] Pluto v0.20.13
nothing