x86_64 cuda13 spatial gpu notebook 7db3d6e53ebf - huchlab/sequencing-docker-stacks GitHub Wiki
- Build timestamp: 2026-03-23T06:30:16Z
- Docker image:
quay.io/huchlab/spatial-gpu-notebook:7db3d6e53ebf - Docker image size: 47.5GB
- Git commit SHA: 7db3d6e53ebf1439a3bcfd36412d32e5496ecd1c
- Git commit message:
Schedule builds 2 hours after upstream build
Python 3.13.12
conda info:
active environment : None
user config file : /home/jovyan/.condarc
populated config files : /opt/conda/.condarc
/home/jovyan/.condarc
conda version : 26.1.1
conda-build version : not installed
python version : 3.13.12.final.0
solver : libmamba (default)
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package cache : /opt/conda/pkgs
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envs directories : /opt/conda/envs
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mamba info:
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mamba version : 2.5.0
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environment : base
env location : /opt/conda
user config files : /home/jovyan/.mambarc
populated config files : /home/jovyan/.condarc
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virtual packages : __unix=0=0
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base environment : /opt/conda
platform : linux-64
mamba list:
List of packages in environment: "/opt/conda"
Name Version Build Channel
─────────────────────────────────────────────────────────────────────────────────────────────────────────────────
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smmap 5.0.2 pyhd8ed1ab_0 conda-forge
snappy 1.2.2 h03e3b7b_1 conda-forge
sniffio 1.3.1 pyhd8ed1ab_2 conda-forge
snowballstemmer 3.0.1 pypi_0 pypi
sortedcontainers 2.4.0 pyhd8ed1ab_1 conda-forge
soupsieve 2.8.3 pyhd8ed1ab_0 conda-forge
sparse 0.18.0 pyhcf101f3_0 conda-forge
spatial-image 1.2.3 pyhd8ed1ab_1 conda-forge
spatialdata 0.7.2 pypi_0 pypi
spatialdata-io 0.6.0 pypi_0 pypi
spatialdata-plot 0.2.14 pypi_0 pypi
spdlog 1.17.0 hab81395_1 conda-forge
sphinxcontrib-applehelp 2.0.0 pypi_0 pypi
sphinxcontrib-devhelp 2.0.0 pypi_0 pypi
sphinxcontrib-htmlhelp 2.1.0 pypi_0 pypi
sphinxcontrib-jsmath 1.0.1 pypi_0 pypi
sphinxcontrib-qthelp 2.0.0 pypi_0 pypi
sphinxcontrib-serializinghtml 2.0.0 pypi_0 pypi
spirv-tools 2026.1 hb700be7_0 conda-forge
sqlalchemy 2.0.48 py313h54dd161_0 conda-forge
sqlite 3.52.0 h04a0ce9_0 conda-forge
squidpy 1.8.1 pypi_0 pypi
stack_data 0.6.3 pyhd8ed1ab_1 conda-forge
starlette 0.52.1 pypi_0 pypi
statsmodels 0.14.6 py313h29aa505_0 conda-forge
stdlib-list 0.12.0 pyhd8ed1ab_0 conda-forge
streamz 0.6.5 pyh332efcf_0 conda-forge
superlu 7.0.1 h8f6e6c4_0 conda-forge
superlu_dist 9.1.0 h3349319_0 conda-forge
superqt 0.8.0 pypi_0 pypi
svt-av1 4.0.1 hecca717_0 conda-forge
sympy 1.14.0 pyh2585a3b_106 conda-forge
sysroot_linux-64 2.39 hc4b9eeb_6 conda-forge
tabulate 0.10.0 pyhcf101f3_0 conda-forge
tangram-sc 1.0.4 pypi_0 pypi
tbb 2022.3.0 h8d10470_1 conda-forge
tbb-devel 2022.3.0 h74b38a2_1 conda-forge
tblib 3.2.2 pyhcf101f3_0 conda-forge
tenacity 9.1.4 pyhcf101f3_0 conda-forge
tensorboard 2.20.0 pyhe01879c_0 conda-forge
tensorboard-data-server 0.7.0 py313h3c54b1c_4 conda-forge
terminado 0.18.1 pyhc90fa1f_1 conda-forge
texttable 1.7.0 pyhd8ed1ab_1 conda-forge
threadpoolctl 3.6.0 pyhecae5ae_0 conda-forge
tifffile 2026.3.3 pyhd8ed1ab_0 conda-forge
tinycss2 1.4.0 pyhd8ed1ab_0 conda-forge
tk 8.6.13 noxft_h366c992_103 conda-forge
tktable 2.10 h8d826fa_7 conda-forge
toml 0.10.2 pyhcf101f3_3 conda-forge
tomli 2.4.0 pyhcf101f3_0 conda-forge
tomli_w 1.2.0 pypi_0 pypi
tomlkit 0.14.0 pyha770c72_0 conda-forge
toolz 1.1.0 pyhd8ed1ab_1 conda-forge
torch 2.9.1+cu130 pypi_0 pypi
torchaudio 2.9.1 pypi_0 pypi
torchmetrics 1.8.2 pyhd8ed1ab_0 conda-forge
torchvision 0.24.1+cu130 pypi_0 pypi
tornado 6.5.4 py313hd02dea0_0 conda-forge
tqdm 4.67.3 pyh8f84b5b_0 conda-forge
trackhub 1.0 pyh7cba7a3_0 bioconda
traitlets 5.14.3 pyhd8ed1ab_1 conda-forge
treelite 4.7.0 py313ha381a76_0 conda-forge
triton 3.5.1 pypi_0 pypi
truststore 0.10.4 pyhcf101f3_0 conda-forge
typeguard 4.5.1 pypi_0 pypi
typer 0.24.1 pypi_0 pypi
typing-extensions 4.15.0 h396c80c_0 conda-forge
typing-inspection 0.4.2 pyhd8ed1ab_1 conda-forge
typing_extensions 4.15.0 pyhcf101f3_0 conda-forge
typing_utils 0.1.0 pyhd8ed1ab_1 conda-forge
tzdata 2025c hc9c84f9_1 conda-forge
tzlocal 5.3.1 pyh8f84b5b_0 conda-forge
uc-micro-py 2.0.0 pyhcf101f3_0 conda-forge
ucc 1.6.0 h433704b_1 conda-forge
ucx 1.19.1 h567e125_0 conda-forge
ucxx 0.47.00 cuda13_py313_251210_5d6f0af3 rapidsai
ujson 5.12.0 pypi_0 pypi
umap-learn 0.5.11 py313h78bf25f_0 conda-forge
universal_pathlib 0.3.10 pypi_0 pypi
unixodbc 2.3.14 h69e2008_0 conda-forge
uri-template 1.3.0 pyhd8ed1ab_1 conda-forge
uriparser 0.9.8 hac33072_0 conda-forge
urllib3 2.6.3 pyhd8ed1ab_0 conda-forge
uv 0.10.10 h0f56927_0 conda-forge
uvicorn 0.42.0 pypi_0 pypi
validators 0.35.0 pypi_0 pypi
vispy 0.15.2 pypi_0 pypi
vitessce 3.8.2 pypi_0 pypi
wayland 1.24.0 hd6090a7_1 conda-forge
wayland-protocols 1.47 hd8ed1ab_0 conda-forge
wcwidth 0.6.0 pyhd8ed1ab_0 conda-forge
webcolors 25.10.0 pyhd8ed1ab_0 conda-forge
webencodings 0.5.1 pyhd8ed1ab_3 conda-forge
websocket-client 1.9.0 pyhd8ed1ab_0 conda-forge
werkzeug 3.1.6 pyhcf101f3_0 conda-forge
wget 3.2 pypi_0 pypi
widgetsnbextension 4.0.15 pyhd8ed1ab_0 conda-forge
wrapt 2.1.2 py313h07c4f96_0 conda-forge
x264 1!164.3095 h166bdaf_2 conda-forge
x265 3.5 h924138e_3 conda-forge
xarray 2026.2.0 pyhcf101f3_0 conda-forge
xarray-dataclass 3.0.0 pyhd8ed1ab_1 conda-forge
xarray-datatree 0.0.14 pypi_0 pypi
xarray-spatial 0.9.2 pypi_0 pypi
xcb-util 0.4.1 h4f16b4b_2 conda-forge
xcb-util-cursor 0.1.6 hb03c661_0 conda-forge
xcb-util-image 0.4.0 hb711507_2 conda-forge
xcb-util-keysyms 0.4.1 hb711507_0 conda-forge
xcb-util-renderutil 0.3.10 hb711507_0 conda-forge
xcb-util-wm 0.4.2 hb711507_0 conda-forge
xerces-c 3.3.0 hd9031aa_1 conda-forge
xgboost 3.1.2 rapidsai_pyh3432f66_1 rapidsai
xkeyboard-config 2.47 hb03c661_0 conda-forge
xlrd 2.0.2 pyhd8ed1ab_0 conda-forge
xlsxwriter 3.2.9 pyhd8ed1ab_0 conda-forge
xmltodict 1.0.4 pyhcf101f3_0 conda-forge
xorg-libice 1.1.2 hb9d3cd8_0 conda-forge
xorg-libsm 1.2.6 he73a12e_0 conda-forge
xorg-libx11 1.8.13 he1eb515_0 conda-forge
xorg-libxau 1.0.12 hb03c661_1 conda-forge
xorg-libxcomposite 0.4.7 hb03c661_0 conda-forge
xorg-libxcursor 1.2.3 hb9d3cd8_0 conda-forge
xorg-libxdamage 1.1.6 hb9d3cd8_0 conda-forge
xorg-libxdmcp 1.1.5 hb03c661_1 conda-forge
xorg-libxext 1.3.7 hb03c661_0 conda-forge
xorg-libxfixes 6.0.2 hb03c661_0 conda-forge
xorg-libxi 1.8.2 hb9d3cd8_0 conda-forge
xorg-libxrandr 1.5.5 hb03c661_0 conda-forge
xorg-libxrender 0.9.12 hb9d3cd8_0 conda-forge
xorg-libxscrnsaver 1.2.4 hb9d3cd8_0 conda-forge
xorg-libxshmfence 1.3.3 hb9d3cd8_0 conda-forge
xorg-libxt 1.3.1 hb9d3cd8_0 conda-forge
xorg-libxtst 1.2.5 hb9d3cd8_3 conda-forge
xorg-libxxf86vm 1.1.7 hb03c661_0 conda-forge
xorg-xextproto 7.3.0 hb9d3cd8_1004 conda-forge
xsdata 26.2 pypi_0 pypi
xyzservices 2025.11.0 pyhd8ed1ab_0 conda-forge
yaml 0.2.5 h280c20c_3 conda-forge
yaml-cpp 0.8.0 h3f2d84a_0 conda-forge
yarl 1.23.0 py313h3dea7bd_0 conda-forge
yq 3.4.3 pyhe01879c_2 conda-forge
zarr 3.1.5 pyhcf101f3_0 conda-forge
zeromq 4.3.5 h387f397_9 conda-forge
zfp 1.0.1 h909a3a2_5 conda-forge
zict 3.0.0 pyhd8ed1ab_1 conda-forge
zipp 3.23.0 pyhcf101f3_1 conda-forge
zlib 1.3.1 hb9d3cd8_2 conda-forge
zlib-ng 2.3.3 hceb46e0_1 conda-forge
zstandard 0.25.0 py313h54dd161_1 conda-forge
zstd 1.5.7 hb78ec9c_6 conda-forge
apt list --installed:
WARNING: apt does not have a stable CLI interface. Use with caution in scripts.
Listing...
adduser/now 3.137ubuntu1 all [installed,local]
apt/now 2.8.3 amd64 [installed,local]
base-files/now 13ubuntu10.4 amd64 [installed,local]
base-passwd/now 3.6.3build1 amd64 [installed,local]
bash/now 5.2.21-2ubuntu4 amd64 [installed,local]
binutils-common/now 2.42-4ubuntu2.8 amd64 [installed,local]
binutils-x86-64-linux-gnu/now 2.42-4ubuntu2.8 amd64 [installed,local]
binutils/now 2.42-4ubuntu2.8 amd64 [installed,local]
bsdutils/now 1:2.39.3-9ubuntu6.5 amd64 [installed,local]
build-essential/now 12.10ubuntu1 amd64 [installed,local]
bzip2/now 1.0.8-5.1build0.1 amd64 [installed,local]
ca-certificates/now 20240203 all [installed,local]
cm-super-minimal/now 0.3.4-17 all [installed,local]
cm-super/now 0.3.4-17 all [installed,local]
coreutils/now 9.4-3ubuntu6.1 amd64 [installed,local]
cpp-13-x86-64-linux-gnu/now 13.3.0-6ubuntu2~24.04.1 amd64 [installed,local]
cpp-13/now 13.3.0-6ubuntu2~24.04.1 amd64 [installed,local]
cpp-x86-64-linux-gnu/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
cpp/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
curl/now 8.5.0-2ubuntu10.8 amd64 [installed,local]
dash/now 0.5.12-6ubuntu5 amd64 [installed,local]
debconf/now 1.5.86ubuntu1 all [installed,local]
debianutils/now 5.17build1 amd64 [installed,local]
diffutils/now 1:3.10-1build1 amd64 [installed,local]
dpkg-dev/now 1.22.6ubuntu6.5 all [installed,local]
dpkg/now 1.22.6ubuntu6.5 amd64 [installed,local]
dvipng/now 1.15-1.1 amd64 [installed,local]
e2fsprogs/now 1.47.0-2.4~exp1ubuntu4.1 amd64 [installed,local]
ffmpeg/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
findutils/now 4.9.0-5build1 amd64 [installed,local]
fontconfig-config/now 2.15.0-1.1ubuntu2 amd64 [installed,local]
fontconfig/now 2.15.0-1.1ubuntu2 amd64 [installed,local]
fonts-dejavu-core/now 2.37-8 all [installed,local]
fonts-dejavu-extra/now 2.37-8 all [installed,local]
fonts-dejavu-mono/now 2.37-8 all [installed,local]
fonts-dejavu/now 2.37-8 all [installed,local]
fonts-liberation/now 1:2.1.5-3 all [installed,local]
fonts-lmodern/now 2.005-1 all [installed,local]
fonts-urw-base35/now 20200910-8 all [installed,local]
g++-13-x86-64-linux-gnu/now 13.3.0-6ubuntu2~24.04.1 amd64 [installed,local]
g++-13/now 13.3.0-6ubuntu2~24.04.1 amd64 [installed,local]
g++-x86-64-linux-gnu/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
g++/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
gcc-13-base/now 13.3.0-6ubuntu2~24.04.1 amd64 [installed,local]
gcc-13-x86-64-linux-gnu/now 13.3.0-6ubuntu2~24.04.1 amd64 [installed,local]
gcc-13/now 13.3.0-6ubuntu2~24.04.1 amd64 [installed,local]
gcc-14-base/now 14.2.0-4ubuntu2~24.04.1 amd64 [installed,local]
gcc-x86-64-linux-gnu/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
gcc/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
gfortran-13-x86-64-linux-gnu/now 13.3.0-6ubuntu2~24.04.1 amd64 [installed,local]
gfortran-13/now 13.3.0-6ubuntu2~24.04.1 amd64 [installed,local]
gfortran-x86-64-linux-gnu/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
gfortran/now 4:13.2.0-7ubuntu1 amd64 [installed,local]
ghostscript/now 10.02.1~dfsg1-0ubuntu7.8 amd64 [installed,local]
git-lfs/now 3.4.1-1ubuntu0.3 amd64 [installed,local]
git-man/now 1:2.43.0-1ubuntu7.3 all [installed,local]
git/now 1:2.43.0-1ubuntu7.3 amd64 [installed,local]
gpgv/now 2.4.4-2ubuntu17.4 amd64 [installed,local]
grep/now 3.11-4build1 amd64 [installed,local]
gzip/now 1.12-1ubuntu3.1 amd64 [installed,local]
hostname/now 3.23+nmu2ubuntu2 amd64 [installed,local]
init-system-helpers/now 1.66ubuntu1 all [installed,local]
less/now 590-2ubuntu2.1 amd64 [installed,local]
libacl1/now 2.3.2-1build1.1 amd64 [installed,local]
libaom3/now 3.8.2-2ubuntu0.1 amd64 [installed,local]
libapache-pom-java/now 29-2 all [installed,local]
libapparmor1/now 4.0.1really4.0.1-0ubuntu0.24.04.5 amd64 [installed,local]
libapt-pkg6.0t64/now 2.8.3 amd64 [installed,local]
libasan8/now 14.2.0-4ubuntu2~24.04.1 amd64 [installed,local]
libasound2-data/now 1.2.11-1ubuntu0.2 all [installed,local]
libasound2t64/now 1.2.11-1ubuntu0.2 amd64 [installed,local]
libass9/now 1:0.17.1-2build1 amd64 [installed,local]
libassuan0/now 2.5.6-1build1 amd64 [installed,local]
libasyncns0/now 0.8-6build4 amd64 [installed,local]
libatomic1/now 14.2.0-4ubuntu2~24.04.1 amd64 [installed,local]
libattr1/now 1:2.5.2-1build1.1 amd64 [installed,local]
libaudit-common/now 1:3.1.2-2.1build1.1 all [installed,local]
libaudit1/now 1:3.1.2-2.1build1.1 amd64 [installed,local]
libavahi-client3/now 0.8-13ubuntu6.1 amd64 [installed,local]
libavahi-common-data/now 0.8-13ubuntu6.1 amd64 [installed,local]
libavahi-common3/now 0.8-13ubuntu6.1 amd64 [installed,local]
libavc1394-0/now 0.5.4-5build3 amd64 [installed,local]
libavcodec60/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libavdevice60/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libavfilter9/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libavformat60/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libavutil58/now 7:6.1.1-3ubuntu5 amd64 [installed,local]
libbinutils/now 2.42-4ubuntu2.8 amd64 [installed,local]
libblas3/now 3.12.0-3build1.1 amd64 [installed,local]
libblkid1/now 2.39.3-9ubuntu6.5 amd64 [installed,local]
libbluray2/now 1:1.3.4-1build1 amd64 [installed,local]
libbrotli1/now 1.1.0-2build2 amd64 [installed,local]
libbs2b0/now 3.1.0+dfsg-7build1 amd64 [installed,local]
libbsd0/now 0.12.1-1build1.1 amd64 [installed,local]
libbz2-1.0/now 1.0.8-5.1build0.1 amd64 [installed,local]
libc-bin/now 2.39-0ubuntu8.7 amd64 [installed,local]
libc-dev-bin/now 2.39-0ubuntu8.7 amd64 [installed,local]
libc6-dev/now 2.39-0ubuntu8.7 amd64 [installed,local]
libc6/now 2.39-0ubuntu8.7 amd64 [installed,local]
libcaca0/now 0.99.beta20-4ubuntu0.1 amd64 [installed,local]
libcairo-gobject2/now 1.18.0-3build1 amd64 [installed,local]
libcairo2/now 1.18.0-3build1 amd64 [installed,local]
libcap-ng0/now 0.8.4-2build2 amd64 [installed,local]
libcap2/now 1:2.66-5ubuntu2.2 amd64 [installed,local]
libcbor0.10/now 0.10.2-1.2ubuntu2 amd64 [installed,local]
libcc1-0/now 14.2.0-4ubuntu2~24.04.1 amd64 [installed,local]
libcdio-cdda2t64/now 10.2+2.0.1-1.1build2 amd64 [installed,local]
libcdio-paranoia2t64/now 10.2+2.0.1-1.1build2 amd64 [installed,local]
libcdio19t64/now 2.1.0-4.1ubuntu1.2 amd64 [installed,local]
libchromaprint1/now 1.5.1-5 amd64 [installed,local]
libcjson1/now 1.7.17-1 amd64 [installed,local]
libcodec2-1.2/now 1.2.0-2build1 amd64 [installed,local]
libcom-err2/now 1.47.0-2.4~exp1ubuntu4.1 amd64 [installed,local]
libcommons-logging-java/now 1.3.0-1ubuntu1 all [installed,local]
libcommons-parent-java/now 56-1 all [installed,local]
libcrypt-dev/now 1:4.4.36-4build1 amd64 [installed,local]
libcrypt1/now 1:4.4.36-4build1 amd64 [installed,local]
libctf-nobfd0/now 2.42-4ubuntu2.8 amd64 [installed,local]
libctf0/now 2.42-4ubuntu2.8 amd64 [installed,local]
libcups2t64/now 2.4.7-1.2ubuntu7.9 amd64 [installed,local]
libcurl3t64-gnutls/now 8.5.0-2ubuntu10.8 amd64 [installed,local]
libcurl4t64/now 8.5.0-2ubuntu10.8 amd64 [installed,local]
libdatrie1/now 0.2.13-3build1 amd64 [installed,local]
libdav1d7/now 1.4.1-1build1 amd64 [installed,local]
libdb5.3t64/now 5.3.28+dfsg2-7 amd64 [installed,local]
libdbus-1-3/now 1.14.10-4ubuntu4.1 amd64 [installed,local]
libdc1394-25/now 2.2.6-4build1 amd64 [installed,local]
libde265-0/now 1.0.15-1build3 amd64 [installed,local]
libdebconfclient0/now 0.271ubuntu3 amd64 [installed,local]
libdecor-0-0/now 0.2.2-1build2 amd64 [installed,local]
libdeflate0/now 1.19-1build1.1 amd64 [installed,local]
libdpkg-perl/now 1.22.6ubuntu6.5 all [installed,local]
libdrm-amdgpu1/now 2.4.125-1ubuntu0.1~24.04.1 amd64 [installed,local]
libdrm-common/now 2.4.125-1ubuntu0.1~24.04.1 all [installed,local]
libdrm-intel1/now 2.4.125-1ubuntu0.1~24.04.1 amd64 [installed,local]
libdrm2/now 2.4.125-1ubuntu0.1~24.04.1 amd64 [installed,local]
libedit2/now 3.1-20230828-1build1 amd64 [installed,local]
libelf1t64/now 0.190-1.1ubuntu0.1 amd64 [installed,local]
liberror-perl/now 0.17029-2 all [installed,local]
libexpat1/now 2.6.1-2ubuntu0.4 amd64 [installed,local]
libext2fs2t64/now 1.47.0-2.4~exp1ubuntu4.1 amd64 [installed,local]
libffi8/now 3.4.6-1build1 amd64 [installed,local]
libfftw3-double3/now 3.3.10-1ubuntu3 amd64 [installed,local]
libfido2-1/now 1.14.0-1build3 amd64 [installed,local]
libflac12t64/now 1.4.3+ds-2.1ubuntu2 amd64 [installed,local]
libflite1/now 2.2-6build3 amd64 [installed,local]
libfontbox-java/now 1:1.8.16-5 all [installed,local]
libfontconfig1/now 2.15.0-1.1ubuntu2 amd64 [installed,local]
libfontenc1/now 1:1.1.8-1build1 amd64 [installed,local]
libfreetype6/now 2.13.2+dfsg-1ubuntu0.1 amd64 [installed,local]
libfribidi0/now 1.0.13-3build1 amd64 [installed,local]
libgbm1/now 25.2.8-0ubuntu0.24.04.1 amd64 [installed,local]
libgcc-13-dev/now 13.3.0-6ubuntu2~24.04.1 amd64 [installed,local]
libgcc-s1/now 14.2.0-4ubuntu2~24.04.1 amd64 [installed,local]
libgcrypt20/now 1.10.3-2build1 amd64 [installed,local]
libgd3/now 2.3.3-9ubuntu5 amd64 [installed,local]
libgdbm-compat4t64/now 1.23-5.1build1 amd64 [installed,local]
libgdbm6t64/now 1.23-5.1build1 amd64 [installed,local]
libgdk-pixbuf-2.0-0/now 2.42.10+dfsg-3ubuntu3.2 amd64 [installed,local]
libgdk-pixbuf2.0-common/now 2.42.10+dfsg-3ubuntu3.2 all [installed,local]
libgfortran-13-dev/now 13.3.0-6ubuntu2~24.04.1 amd64 [installed,local]
libgfortran5/now 14.2.0-4ubuntu2~24.04.1 amd64 [installed,local]
libgl1-mesa-dri/now 25.2.8-0ubuntu0.24.04.1 amd64 [installed,local]
libgl1/now 1.7.0-1build1 amd64 [installed,local]
libglib2.0-0t64/now 2.80.0-6ubuntu3.8 amd64 [installed,local]
libglvnd0/now 1.7.0-1build1 amd64 [installed,local]
libglx-mesa0/now 25.2.8-0ubuntu0.24.04.1 amd64 [installed,local]
libglx0/now 1.7.0-1build1 amd64 [installed,local]
libgme0/now 0.6.3-7build1 amd64 [installed,local]
libgmp10/now 2:6.3.0+dfsg-2ubuntu6.1 amd64 [installed,local]
libgnutls30t64/now 3.8.3-1.1ubuntu3.5 amd64 [installed,local]
libgomp1/now 14.2.0-4ubuntu2~24.04.1 amd64 [installed,local]
libgpg-error0/now 1.47-3build2.1 amd64 [installed,local]
libgprofng0/now 2.42-4ubuntu2.8 amd64 [installed,local]
libgraphite2-3/now 1.3.14-2build1 amd64 [installed,local]
libgs-common/now 10.02.1~dfsg1-0ubuntu7.8 all [installed,local]
libgs10-common/now 10.02.1~dfsg1-0ubuntu7.8 all [installed,local]
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libgsm1/now 1.0.22-1build1 amd64 [installed,local]
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R --version:
R version 4.4.3 (2025-02-28) -- "Trophy Case"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-conda-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under the terms of the
GNU General Public License versions 2 or 3.
For more information about these matters see
https://www.gnu.org/licenses/.
R --silent -e 'installed.packages(.Library)[, c(1,3)]':
> installed.packages(.Library)[, c(1,3)]
Package Version
abind "abind" "1.4-8"
anndata "anndata" "0.7.5.6"
AnnotationDbi "AnnotationDbi" "1.68.0"
AnnotationFilter "AnnotationFilter" "1.30.0"
ape "ape" "5.8-1"
aplot "aplot" "0.2.9"
arrow "arrow" "21.0.0"
askpass "askpass" "1.2.1"
assertthat "assertthat" "0.2.1"
assorthead "assorthead" "1.0.0"
backports "backports" "1.5.0"
base "base" "4.4.3"
base64enc "base64enc" "0.1-6"
basilisk "basilisk" "1.18.0"
basilisk.utils "basilisk.utils" "1.18.0"
batchelor "batchelor" "1.22.0"
beachmat "beachmat" "2.22.0"
beeswarm "beeswarm" "0.4.0"
BH "BH" "1.87.0-1"
Biobase "Biobase" "2.66.0"
BiocFileCache "BiocFileCache" "2.14.0"
BiocGenerics "BiocGenerics" "0.52.0"
BiocIO "BiocIO" "1.16.0"
BiocManager "BiocManager" "1.30.27"
BiocNeighbors "BiocNeighbors" "2.0.0"
BiocParallel "BiocParallel" "1.40.0"
BiocSingular "BiocSingular" "1.22.0"
biomaRt "biomaRt" "2.62.0"
Biostrings "Biostrings" "2.74.0"
biovizBase "biovizBase" "1.54.0"
bit "bit" "4.6.0"
bit64 "bit64" "4.6.0-1"
bitops "bitops" "1.0-9"
blob "blob" "1.3.0"
bluster "bluster" "1.16.0"
boot "boot" "1.3-32"
brew "brew" "1.0-10"
brio "brio" "1.1.5"
broom "broom" "1.0.12"
broom.helpers "broom.helpers" "1.22.0"
BSgenome "BSgenome" "1.74.0"
bslib "bslib" "0.10.0"
cachem "cachem" "1.1.0"
Cairo "Cairo" "1.7-0"
callr "callr" "3.7.6"
car "car" "3.1-5"
carData "carData" "3.0-6"
cards "cards" "0.7.1"
caret "caret" "7.0-1"
caTools "caTools" "1.18.3"
CCPlotR "CCPlotR" "1.4.0"
cellranger "cellranger" "1.1.0"
checkmate "checkmate" "2.3.3"
circlize "circlize" "0.4.17"
class "class" "7.3-23"
cli "cli" "3.6.5"
clipr "clipr" "0.8.0"
clock "clock" "0.7.4"
clue "clue" "0.3-67"
cluster "cluster" "2.1.8.2"
clusterProfiler "clusterProfiler" "4.14.0"
clustree "clustree" "0.5.1"
codetools "codetools" "0.2-20"
collections "collections" "0.3.11"
colorspace "colorspace" "2.1-2"
commonmark "commonmark" "2.0.0"
compiler "compiler" "4.4.3"
ComplexHeatmap "ComplexHeatmap" "2.22.0"
conflicted "conflicted" "1.2.0"
conquer "conquer" "1.3.3"
corrplot "corrplot" "0.95"
cowplot "cowplot" "1.2.0"
cpp11 "cpp11" "0.5.3"
crayon "crayon" "1.5.3"
credentials "credentials" "2.0.3"
crosstalk "crosstalk" "1.2.2"
crul "crul" "1.6.0"
curl "curl" "7.0.0"
cyclocomp "cyclocomp" "1.1.2"
data.table "data.table" "1.17.8"
datasets "datasets" "4.4.3"
DBI "DBI" "1.3.0"
dbplyr "dbplyr" "2.5.2"
decoupleR "decoupleR" "2.12.0"
DelayedArray "DelayedArray" "0.32.0"
DelayedMatrixStats "DelayedMatrixStats" "1.28.0"
deldir "deldir" "2.0-4"
Deriv "Deriv" "4.2.0"
desc "desc" "1.4.3"
DESeq2 "DESeq2" "1.46.0"
devtools "devtools" "2.4.6"
diagram "diagram" "1.6.5"
dials "dials" "1.4.2"
DiceDesign "DiceDesign" "1.10"
dichromat "dichromat" "2.0-0.1"
diffobj "diffobj" "0.3.6"
digest "digest" "0.6.39"
dir.expiry "dir.expiry" "1.14.0"
doBy "doBy" "4.7.1"
doParallel "doParallel" "1.0.17"
DOSE "DOSE" "4.0.0"
dotCall64 "dotCall64" "1.2"
downlit "downlit" "0.4.5"
dplyr "dplyr" "1.2.0"
dqrng "dqrng" "0.3.2"
dtplyr "dtplyr" "1.3.3"
e1071 "e1071" "1.7-17"
edgeR "edgeR" "4.4.0"
ellipsis "ellipsis" "0.3.2"
enrichplot "enrichplot" "1.26.1"
ensembldb "ensembldb" "2.30.0"
evaluate "evaluate" "1.0.5"
fansi "fansi" "1.0.7"
farver "farver" "2.1.2"
fastcluster "fastcluster" "1.3.0"
fastDummies "fastDummies" "1.7.5"
fastmap "fastmap" "1.2.0"
fastmatch "fastmatch" "1.1-8"
feather "feather" "0.4.0"
fgsea "fgsea" "1.32.2"
filelock "filelock" "1.0.3"
fitdistrplus "fitdistrplus" "1.2-6"
FNN "FNN" "1.1.4.1"
fontawesome "fontawesome" "0.5.3"
fontBitstreamVera "fontBitstreamVera" "0.1.1"
fontLiberation "fontLiberation" "0.1.0"
fontquiver "fontquiver" "0.2.1"
forcats "forcats" "1.0.1"
foreach "foreach" "1.5.2"
forecast "forecast" "9.0.1"
foreign "foreign" "0.8-91"
formatR "formatR" "1.14"
Formula "Formula" "1.2-5"
fracdiff "fracdiff" "1.5-3"
fs "fs" "1.6.6"
furrr "furrr" "0.3.1"
futile.logger "futile.logger" "1.4.9"
futile.options "futile.options" "1.0.1"
future "future" "1.70.0"
future.apply "future.apply" "1.20.2"
gargle "gargle" "1.6.1"
gbRd "gbRd" "0.4.12"
gdtools "gdtools" "0.5.0"
generics "generics" "0.1.4"
GenomeInfoDb "GenomeInfoDb" "1.42.0"
GenomeInfoDbData "GenomeInfoDbData" "1.2.13"
GenomicAlignments "GenomicAlignments" "1.42.0"
GenomicFeatures "GenomicFeatures" "1.58.0"
GenomicRanges "GenomicRanges" "1.58.0"
gert "gert" "2.3.1"
GetoptLong "GetoptLong" "1.1.0"
gfonts "gfonts" "0.2.0"
GGally "GGally" "2.4.0"
ggbeeswarm "ggbeeswarm" "0.7.3"
ggbump "ggbump" "0.1.0"
ggforce "ggforce" "0.5.0"
ggfun "ggfun" "0.2.0"
ggh4x "ggh4x" "0.3.1"
ggiraph "ggiraph" "0.9.5"
ggnewscale "ggnewscale" "0.5.2"
ggplot2 "ggplot2" "4.0.2"
ggplotify "ggplotify" "0.1.3"
ggpubr "ggpubr" "0.6.3"
ggraph "ggraph" "2.2.2"
ggrastr "ggrastr" "1.0.2"
ggrepel "ggrepel" "0.9.6"
ggridges "ggridges" "0.5.7"
ggsci "ggsci" "4.2.0"
ggsignif "ggsignif" "0.6.4"
ggstats "ggstats" "0.13.0"
ggtangle "ggtangle" "0.1.1"
ggtext "ggtext" "0.1.2"
ggthemes "ggthemes" "5.2.0"
ggtree "ggtree" "3.14.0"
ggupset "ggupset" "0.4.1"
ggvenn "ggvenn" "0.1.19"
gh "gh" "1.5.0"
gitcreds "gitcreds" "0.1.2"
GlobalOptions "GlobalOptions" "0.1.3"
globals "globals" "0.19.1"
glue "glue" "1.8.0"
GO.db "GO.db" "3.20.0"
goftest "goftest" "1.2-3"
googledrive "googledrive" "2.1.2"
googlesheets4 "googlesheets4" "1.1.2"
GOSemSim "GOSemSim" "2.32.0"
gower "gower" "1.0.2"
GPfit "GPfit" "1.0-9"
gplots "gplots" "3.3.0"
graph "graph" "1.84.0"
graphics "graphics" "4.4.3"
graphlayouts "graphlayouts" "1.2.3"
grDevices "grDevices" "4.4.3"
grid "grid" "4.4.3"
gridExtra "gridExtra" "2.3"
gridGraphics "gridGraphics" "0.5-1"
gridtext "gridtext" "0.1.6"
grImport "grImport" "0.9-7"
gson "gson" "0.1.0"
gtable "gtable" "0.3.6"
gtools "gtools" "3.9.5"
Gviz "Gviz" "1.50.0"
hardhat "hardhat" "1.4.2"
harmony "harmony" "1.2.4"
haven "haven" "2.5.5"
HDF5Array "HDF5Array" "1.34.0"
here "here" "1.0.2"
hexbin "hexbin" "1.28.5"
highr "highr" "0.12"
Hmisc "Hmisc" "5.2-5"
hms "hms" "1.1.4"
htmlTable "htmlTable" "2.4.3"
htmltools "htmltools" "0.5.9"
htmlwidgets "htmlwidgets" "1.6.4"
httpcode "httpcode" "0.3.0"
httpuv "httpuv" "1.6.16"
httr "httr" "1.4.8"
httr2 "httr2" "1.2.2"
ica "ica" "1.0-3"
ids "ids" "1.0.1"
igraph "igraph" "2.1.4"
infer "infer" "1.1.0"
ini "ini" "0.3.1"
InteractionSet "InteractionSet" "1.34.0"
interp "interp" "1.1-6"
ipred "ipred" "0.9-15"
IRanges "IRanges" "2.40.0"
IRdisplay "IRdisplay" "1.1"
IRkernel "IRkernel" "1.3.2"
irlba "irlba" "2.3.7"
isoband "isoband" "0.3.0"
iterators "iterators" "1.0.14"
janitor "janitor" "2.2.1"
jpeg "jpeg" "0.1-11"
jquerylib "jquerylib" "0.1.4"
jsonlite "jsonlite" "2.0.0"
KEGGREST "KEGGREST" "1.46.0"
kernlab "kernlab" "0.9-33"
KernSmooth "KernSmooth" "2.23-26"
knitr "knitr" "1.51"
ks "ks" "1.15.1"
labeling "labeling" "0.4.3"
labelled "labelled" "2.16.0"
lambda.r "lambda.r" "1.2.4"
languageserver "languageserver" "0.3.17"
later "later" "1.4.8"
lattice "lattice" "0.22-9"
latticeExtra "latticeExtra" "0.6-31"
lava "lava" "1.8.2"
lazyeval "lazyeval" "0.2.2"
leidenbase "leidenbase" "0.1.36"
lhs "lhs" "1.2.1"
lifecycle "lifecycle" "1.0.5"
limma "limma" "3.62.1"
lintr "lintr" "3.3.0-1"
listenv "listenv" "0.10.1"
litedown "litedown" "0.9"
lme4 "lme4" "1.1-38"
lmtest "lmtest" "0.9-40"
locfit "locfit" "1.5-9.12"
LoomExperiment "LoomExperiment" "1.24.0"
lubridate "lubridate" "1.9.5"
magrittr "magrittr" "2.0.4"
markdown "markdown" "2.0"
MASS "MASS" "7.3-65"
MAST "MAST" "1.32.0"
Matrix "Matrix" "1.7-4"
MatrixGenerics "MatrixGenerics" "1.18.0"
MatrixModels "MatrixModels" "0.5-4"
matrixStats "matrixStats" "1.5.0"
mclust "mclust" "6.1.2"
memoise "memoise" "2.0.1"
metapod "metapod" "1.14.0"
methods "methods" "4.4.3"
mgcv "mgcv" "1.9-4"
microbenchmark "microbenchmark" "1.5.0"
mime "mime" "0.13"
miniUI "miniUI" "0.1.2"
minqa "minqa" "1.2.8"
misc3d "misc3d" "0.9-2"
modeldata "modeldata" "1.5.1"
modelenv "modelenv" "0.2.0"
ModelMetrics "ModelMetrics" "1.2.2.2"
modelr "modelr" "0.1.11"
multicool "multicool" "1.0.1"
munsell "munsell" "0.5.1"
mvtnorm "mvtnorm" "1.3-3"
Nebulosa "Nebulosa" "1.16.0"
nlme "nlme" "3.1-168"
nloptr "nloptr" "2.2.1"
nnet "nnet" "7.3-20"
numDeriv "numDeriv" "2016.8-1.1"
nycflights13 "nycflights13" "1.0.2"
openssl "openssl" "2.3.5"
openxlsx "openxlsx" "4.2.8.1"
org.Hs.eg.db "org.Hs.eg.db" "3.20.0"
org.Mm.eg.db "org.Mm.eg.db" "3.20.0"
otel "otel" "0.2.0"
paletteer "paletteer" "1.7.0"
parallel "parallel" "4.4.3"
parallelDist "parallelDist" "0.2.7"
parallelly "parallelly" "1.46.1"
parsnip "parsnip" "1.4.1"
patchwork "patchwork" "1.3.2"
pbapply "pbapply" "1.7-4"
pbdZMQ "pbdZMQ" "0.3-14"
pbkrtest "pbkrtest" "0.5.5"
pheatmap "pheatmap" "1.0.13"
pillar "pillar" "1.11.1"
pkgbuild "pkgbuild" "1.4.8"
pkgconfig "pkgconfig" "2.0.3"
pkgdown "pkgdown" "2.2.0"
pkgload "pkgload" "1.5.0"
plogr "plogr" "0.2.0"
plot3D "plot3D" "1.4.2"
plotly "plotly" "4.12.0"
plyr "plyr" "1.8.9"
png "png" "0.1-8"
polyclip "polyclip" "1.10-7"
polynom "polynom" "1.4-1"
pracma "pracma" "2.4.6"
praise "praise" "1.0.0"
presto "presto" "1.0.0"
prettyunits "prettyunits" "1.2.0"
prismatic "prismatic" "1.1.2"
pROC "pROC" "1.19.0.1"
processx "processx" "3.8.6"
prodlim "prodlim" "2026.03.11"
profvis "profvis" "0.4.0"
progress "progress" "1.2.3"
progressr "progressr" "0.18.0"
promises "promises" "1.5.0"
ProtGenerics "ProtGenerics" "1.38.0"
proxy "proxy" "0.4-29"
ps "ps" "1.9.1"
purrr "purrr" "1.2.1"
quadprog "quadprog" "1.5-8"
quantmod "quantmod" "0.4.28"
quantreg "quantreg" "6.1"
qvalue "qvalue" "2.38.0"
R.cache "R.cache" "0.17.0"
R.methodsS3 "R.methodsS3" "1.8.2"
R.oo "R.oo" "1.27.1"
R.utils "R.utils" "2.13.0"
R6 "R6" "2.6.1"
ragg "ragg" "1.5.1"
randomForest "randomForest" "4.7-1.2"
RANN "RANN" "2.6.2"
rappdirs "rappdirs" "0.3.4"
rbibutils "rbibutils" "2.4.1"
rcmdcheck "rcmdcheck" "1.4.0"
RColorBrewer "RColorBrewer" "1.1-3"
Rcpp "Rcpp" "1.1.1"
RcppAnnoy "RcppAnnoy" "0.0.23"
RcppArmadillo "RcppArmadillo" "15.2.3-1"
RcppEigen "RcppEigen" "0.3.4.0.2"
RcppHNSW "RcppHNSW" "0.6.0"
RcppML "RcppML" "0.3.7"
RcppParallel "RcppParallel" "5.1.11-2"
RcppProgress "RcppProgress" "0.4.2"
RcppTOML "RcppTOML" "0.2.3"
RCurl "RCurl" "1.98-1.17"
Rdpack "Rdpack" "2.6.6"
readr "readr" "2.2.0"
readxl "readxl" "1.4.5"
recipes "recipes" "1.3.1"
reformulas "reformulas" "0.4.4"
rematch "rematch" "2.0.0"
rematch2 "rematch2" "2.1.2"
remotes "remotes" "2.5.0"
repr "repr" "1.1.7"
reprex "reprex" "2.1.1"
reshape2 "reshape2" "1.4.5"
ResidualMatrix "ResidualMatrix" "1.16.0"
restfulr "restfulr" "0.0.16"
reticulate "reticulate" "1.45.0"
rex "rex" "1.2.1"
Rgraphviz "Rgraphviz" "2.50.0"
rhdf5 "rhdf5" "2.50.0"
rhdf5filters "rhdf5filters" "1.18.0"
Rhdf5lib "Rhdf5lib" "1.28.0"
RhpcBLASctl "RhpcBLASctl" "0.23-42"
Rhtslib "Rhtslib" "3.2.0"
rjson "rjson" "0.2.23"
rlang "rlang" "1.1.7"
rmarkdown "rmarkdown" "2.30"
ROCR "ROCR" "1.0-12"
RODBC "RODBC" "1.3-26.1"
roxygen2 "roxygen2" "7.3.3"
rpart "rpart" "4.1.24"
rprojroot "rprojroot" "2.1.1"
rsample "rsample" "1.3.2"
Rsamtools "Rsamtools" "2.22.0"
RSpectra "RSpectra" "0.16-2"
RSQLite "RSQLite" "2.4.6"
rstatix "rstatix" "0.7.3"
rstudioapi "rstudioapi" "0.18.0"
rsvd "rsvd" "1.0.5"
rtracklayer "rtracklayer" "1.66.0"
Rtsne "Rtsne" "0.17"
rversions "rversions" "3.0.0"
rvest "rvest" "1.0.5"
S4Arrays "S4Arrays" "1.6.0"
S4Vectors "S4Vectors" "0.44.0"
S7 "S7" "0.2.1"
sass "sass" "0.4.10"
ScaledMatrix "ScaledMatrix" "1.14.0"
scales "scales" "1.4.0"
scater "scater" "1.34.1"
scattermore "scattermore" "1.2"
scatterpie "scatterpie" "0.2.6"
scran "scran" "1.34.0"
sctransform "sctransform" "0.4.3"
scuttle "scuttle" "1.16.0"
selectr "selectr" "0.5-1"
sessioninfo "sessioninfo" "1.2.3"
Seurat "Seurat" "5.4.0"
SeuratObject "SeuratObject" "5.3.0"
sfd "sfd" "0.1.0"
shadowtext "shadowtext" "0.1.6"
shape "shape" "1.4.6.1"
shiny "shiny" "1.13.0"
SingleCellExperiment "SingleCellExperiment" "1.28.0"
sitmo "sitmo" "2.0.2"
slam "slam" "0.1-55"
slider "slider" "0.3.3"
snakecase "snakecase" "0.11.1"
snow "snow" "0.4-4"
sourcetools "sourcetools" "0.1.7-1"
sp "sp" "2.2-1"
spam "spam" "2.11-3"
SparseArray "SparseArray" "1.6.0"
SparseM "SparseM" "1.84-2"
sparseMatrixStats "sparseMatrixStats" "1.18.0"
sparsevctrs "sparsevctrs" "0.3.5"
spatstat.data "spatstat.data" "3.1-9"
spatstat.explore "spatstat.explore" "3.7-0"
spatstat.geom "spatstat.geom" "3.7-0"
spatstat.random "spatstat.random" "3.4-4"
spatstat.sparse "spatstat.sparse" "3.1-0"
spatstat.univar "spatstat.univar" "3.1-6"
spatstat.utils "spatstat.utils" "3.2-1"
splines "splines" "4.4.3"
SQUAREM "SQUAREM" "2026.1"
statmod "statmod" "1.5.1"
stats "stats" "4.4.3"
stats4 "stats4" "4.4.3"
strawr "strawr" "0.0.92"
stringi "stringi" "1.8.7"
stringr "stringr" "1.6.0"
styler "styler" "1.11.0"
SummarizedExperiment "SummarizedExperiment" "1.36.0"
survival "survival" "3.8-6"
svglite "svglite" "2.2.2"
sys "sys" "3.4.3"
systemfonts "systemfonts" "1.3.2"
tailor "tailor" "0.1.0"
tcltk "tcltk" "4.4.3"
tensor "tensor" "1.5.1"
testthat "testthat" "3.3.2"
textshape "textshape" "1.7.5"
textshaping "textshaping" "1.0.5"
tibble "tibble" "3.3.1"
tidygraph "tidygraph" "1.3.0"
tidymodels "tidymodels" "1.4.1"
tidyr "tidyr" "1.3.2"
tidyselect "tidyselect" "1.2.1"
tidytree "tidytree" "0.4.7"
tidyverse "tidyverse" "2.0.0"
timechange "timechange" "0.4.0"
timeDate "timeDate" "4052.112"
tinytex "tinytex" "0.58"
tools "tools" "4.4.3"
topGO "topGO" "2.58.0"
trackViewer "trackViewer" "1.42.0"
treeio "treeio" "1.30.0"
triebeard "triebeard" "0.4.1"
tseries "tseries" "0.10-60"
TTR "TTR" "0.24.4"
tune "tune" "2.0.1"
tweenr "tweenr" "2.0.3"
txdbmaker "txdbmaker" "1.2.0"
tzdb "tzdb" "0.5.0"
UCSC.utils "UCSC.utils" "1.2.0"
urca "urca" "1.3-4"
urlchecker "urlchecker" "1.0.1"
urltools "urltools" "1.7.3.1"
usethis "usethis" "3.2.1"
utf8 "utf8" "1.2.6"
utils "utils" "4.4.3"
uuid "uuid" "1.2-2"
uwot "uwot" "0.2.4"
VariantAnnotation "VariantAnnotation" "1.52.0"
vctrs "vctrs" "0.7.1"
vipor "vipor" "0.4.7"
viridis "viridis" "0.6.5"
viridisLite "viridisLite" "0.4.3"
vroom "vroom" "1.6.7"
waldo "waldo" "0.6.2"
warp "warp" "0.2.3"
wesanderson "wesanderson" "0.3.7"
whisker "whisker" "0.4.1"
withr "withr" "3.0.2"
workflows "workflows" "1.3.0"
workflowsets "workflowsets" "1.1.1"
writexl "writexl" "1.5.4"
xfun "xfun" "0.56"
XML "XML" "3.99-0.22"
xml2 "xml2" "1.5.2"
xmlparsedata "xmlparsedata" "1.0.5"
xopen "xopen" "1.0.1"
xtable "xtable" "1.8-8"
xts "xts" "0.14.2"
XVector "XVector" "0.46.0"
yaml "yaml" "2.3.12"
yardstick "yardstick" "1.3.2"
yulab.utils "yulab.utils" "0.2.4"
zellkonverter "zellkonverter" "1.16.0"
zip "zip" "2.3.3"
zlibbioc "zlibbioc" "1.52.0"
zoo "zoo" "1.8-14"
>
>
julia -E 'using InteractiveUtils; versioninfo()':
Julia Version 1.12.5
Commit 5fe89b8ddc1 (2026-02-09 16:05 UTC)
Build Info:
Official https://julialang.org release
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: 4 × AMD EPYC 7763 64-Core Processor
WORD_SIZE: 64
LLVM: libLLVM-18.1.7 (ORCJIT, znver3)
GC: Built with stock GC
Threads: 1 default, 1 interactive, 1 GC (on 4 virtual cores)
Environment:
JULIA_DEPOT_PATH = /opt/julia
JULIA_PKGDIR = /opt/julia
LD_LIBRARY_PATH = :/usr/local/nvidia/lib64
nothing
julia -E 'import Pkg; Pkg.status()':
Status `/opt/julia/environments/v1.12/Project.toml`
[f67ccb44] HDF5 v0.17.2
[7073ff75] IJulia v1.34.4
[c3e4b0f8] Pluto v0.20.24
nothing