R Packages - gizotso/R GitHub Wiki
Useful Packages
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Default packages
- R 3.1.0 - 2014 : base, boot, class, cluster, codetools, compiler, datasets, foriegn, graphics, grDevices, grid, KernSmooth, lattice, MASS, Matrix, methods, mgcv, nlme, nnet, parallel, rpart, spatial, splines, stats, stats4, survival, tcltk, tools, utils
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R markdown / R Notebook : requires evaluate, digest, formatR, highrn markdown, stringr, yaml, Rcpp, htmltools, caTools, bitops, knitr, jsonlite, base64enc, rprojroot, rmarkdown
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Text Processing : stringr, tm, tau, languageR, scrapeR
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plotly : D3.JS Charts and Maps for R
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used @ti : mvoutlier, Design, R.oo, tseries, plotrix
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TidyVerse: ggplot2, dplyr, readr, tidyr, purr
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lubridate : Make Dealing with Dates a Little Easier
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AER, Ecdat
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XLConnect, xlsReadWrite, foreign, speedR, sas7bdat, SASxport, RODBC
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Epicalc, msm, alr3, Zelig, sfsmisc
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R.utils, caroline, memisc, gdata
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descr : functions to describe weighted categorical variables and functions to facilitate the character encoding conversion of objects.
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R in Jupyter Notebooks : https://irkernel.github.io/ (repr, IRdisplay, evaluate, crayon, pbdZMQ, devtools, uuid, digest + IRkernel)
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Great R packages for data import, wrangling and visualization @computerworld
My Package list
| Package | Use | Note | Description | CRAN | Links | Dependencies | |
|---|---|---|---|---|---|---|---|
| devtools | 1 | Tools to Make Developing R Packages Easier | devtools | stringr | |||
| Hmisc | 1 | Harrel Miscellaneaous : many functions useful for data analysis, high-level graphics, utility operations, functions for computing sample size and power, importing datasets, imputing missing values, advanced table making, variable clustering, character string manipulation, conversion of R objects to LaTeX code, and recoding variables | Hmisc | ||||
| reshape2 | 1 | Flexibly Reshape Data: A Reboot of the Reshape Package | reshape2 | ||||
| stringr | Simple, Consistent Wrappers for Common String Operations | stringr | |||||
| lessR | 1 | Less Code, More Results | lessR | ||||
| dplyr | 1 | A grammar of Data Manipulation, split-apply-combine paradigm for R. A fast, consistent tool for working with data frame like objects, both in memory and out of memory. | dplyr | ||||
| gplots | 1 | Various R Programming Tools for Plotting Data | gplots | ||||
| ggplot2 | 1 | Create Elegant Data Visualisations Using the Grammar of Graphics. A plotting system for R, which tries to take the good parts of base and lattice graphics and none of the bad parts. | ggplot2 | ||||
| ggExtra | 1 | Add Marginal Histograms and more enhancements to ggplot2 | ggExtra | ||||
| playwith | 1 | A GUI (GTK+) graphical user interface for editing and interacting with R plots. | playwith | ||||
| car | 1 | Companion to Applied Regression | car | ||||
| psych | 1 | Procedures for Psychological, Psychometric, and Personality Research | |||||
| psy | 1 | ||||||
| Epi | 1 | A Package for Statistical Analysis in Epidemiology | Epi | ||||
| corrplot | 1 | Visualization of a Correlation/General Matrix | corrplot | ||||
| wordcloud | 1 | Word Clouds | |||||
| xlsx | 1 | R functions to read/write/format Excel 2007 and Excel 97/2000/XP/2003 files. | |||||
| XLConnect | 1 | ||||||
| descr | 1 | Descriptive Statistics. Weighted frequency and contingency tables of categorical variables and of the comparison of the mean value of a numerical variable by the levels of a factor, and methods to produce xtable objects of the tables and to plot them. | descr | ||||
| prettyR | 1 | Pretty Descriptive Stats | prettyR | ||||
| tables | 1 | Formula-Driven Table Generation, Computes and displays complex tables of summary statistics. | tables | ||||
| xtable | 1 | Export Tables to LaTeX or HTML | xtable | ||||
| htmlTable | 1 | Advanced Tables for Markdown/HTML | htmlTable | ||||
| knitr | 1 | A General-Purpose Package for Dynamic Report Generation in R | knitr | ||||
| rmarkdown | 1 | Convert R Markdown documents into a variety of formats. | rmarkdown | ||||
| shiny | 1 | Web Application Framework for R | shiny | Shiny | |||
| shinyjs | 1 | ||||||
| Rcurl | 1 | General Network (HTTP/FTP/...) Client Interface for R | Rcurl | ||||
| curl | 1 | ||||||
| 1 | |||||||
| foreach | 0 | Provides Foreach Looping Construct for R | foreach | foreach | |||
| base | default | ||||||
| boot | default | Boostrap Functions | boot | ||||
| class | default | Functions for Classification | class | ||||
| cluster | default | cluster | |||||
| codetools | default | Code Analysis Tools for R | codetools | ||||
| compiler | default | ||||||
| datasets | default | The R Datasets Packages | rdoc | R datasets | |||
| foreign | default | Reading and writing data stored by some versions of 'Epi Info', 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', and for reading and writing some 'dBase' files | foreign | ||||
| graphics | default | ||||||
| grDevices | default | ||||||
| grid | default | rdoc | |||||
| KernSmooth | default | Functions for kernel smoothing (and density estimation) | KernSmooth | ||||
| lattice | default | Trellis Graphics for R | lattice | ||||
| MASS | default | MASS | |||||
| Matrix | default | Matrix | |||||
| methods | default | rdoc | |||||
| mgcv | default | mgcv | |||||
| nlme | default | nlme | |||||
| nnet | default | Feed-Forward Neural Networks and Multinomial Log-Linear Models | nnet | ||||
| parallel | default | ||||||
| rpart | default | Recursive Partitioning and Regression Trees | rpart | ||||
| spatial | default | spatial | |||||
| splines | default | ||||||
| stats | default | The R Stats Package | stat.ethz.ch | rdoc | |||
| stats4 | default | Statistical Functions using S4 Classes | stat.ethz.ch | ||||
| survival | default | survival | |||||
| tcltk | default | ||||||
| tools | default | rdoc | |||||
| translations | default | ||||||
| utils | default |
gridExtra