tools_pvacseq_combine_variants.cwl - genome/analysis-workflows GitHub Wiki
Documentation for pvacseq_combine_variants.cwl
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Overview
Combine germline and somatic vcf for pVACseq phasing
Docker Requirement
mgibio/gatk-cwl:3.6.0
Inputs
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| reference | ['string', 'File'] | ['.fai', '^.dict'] | ||
| germline_vcf | File | ['.tbi'] | ||
| somatic_vcf | File | ['.tbi'] |
Outputs
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| combined_vcf | File |