tools_mark_duplicates_and_sort.cwl - genome/analysis-workflows GitHub Wiki
Documentation for mark_duplicates_and_sort.cwl
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Overview
Mark duplicates and Sort
Docker Requirement
mgibio/mark_duplicates-cwl:1.0.1
Inputs
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| bam | File | |||
| input_sort_order | string | |||
| output_name | string? |
Outputs
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| sorted_bam | File | ['.bai'] | ||
| metrics_file | File |