Documentation for filter_consensus.cwl

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Overview

filter consensus reads

Docker Requirement

quay.io/biocontainers/fgbio:1.3.0--0

Inputs

Name	Label	Description	Type	Secondary Files
bam			File
reference			['string', 'File']	['.fai', '^.dict']
min_reads			int[]
max_read_error_rate			float?
max_base_error_rate			float?
min_base_quality			int
max_no_call_fraction			float?

Outputs

Name	Label	Description	Type	Secondary Files
filtered_bam			File